btrspg/r-env : latest
Latest release: about 1 year ago - 342 downloads - 2,231 dependencies
JSONDependencies
- @PKGNAME@ @PKGVERSION@
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.64.1
- AnnotationFilter 1.24.0
- Azimuth 0.5.0
- BH 1.81.0-1
- BPCells 0.1.0
- BSgenome.Hsapiens.UCSC.hg38 1.4.5
- BSgenome 1.68.0
- Biobase 2.60.0
- BiocFileCache 2.8.0
- BiocGenerics 0.46.0
- BiocIO 1.10.0
- BiocManager 1.30.22
- BiocNeighbors 1.20.1
- BiocParallel 1.36.0
- BiocSingular 1.18.0
- BiocVersion 3.18.1
- Biostrings 2.70.1
- CNEr 1.36.0
- Cairo 1.6-2
- DBI 1.1.3
- DESeq2 1.42.0
- DEoptimR 1.1-3
- DOSE 3.28.2
- DT 0.31
- DelayedArray 0.28.0
- DelayedMatrixStats 1.24.0
- DirichletMultinomial 1.42.0
- EnsDb.Hsapiens.v86 2.99.0
- FNN 1.1.3.2
- GO.db 3.18.0
- GOSemSim 2.28.0
- GenomeInfoDb 1.38.2
- GenomeInfoDbData 1.2.11
- GenomicAlignments 1.36.0
- GenomicFeatures 1.52.2
- GenomicRanges 1.54.1
- GlobalOptions 0.1.2
- HDF5Array 1.30.0
- HDO.db 0.99.1
- IRanges 2.36.0
- IRdisplay 1.1
- IRkernel 1.3.2
- JASPAR2020 0.99.10
- KEGGREST 1.42.0
- KernSmooth 2.23-22
- MASS 7.3-60
- MAST 1.28.0
- Matrix 1.6-0
- Matrix 1.6-4
- MatrixGenerics 1.14.0
- MatrixModels 0.5-3
- MetBrewer 0.2.0
- PCAtools 2.14.0
- ProtGenerics 1.32.0
- R.cache 0.16.0
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.3
- R6 2.5.1
- RANN 2.6.1
- RCircos 1.2.2
- RColorBrewer 1.1-3
- RCurl 1.98-1.13
- ROCR 1.0-11
- RSQLite 2.3.4
- RSpectra 0.16-1
- Rcpp 1.0.11
- RcppAnnoy 0.0.21
- RcppArmadillo 0.12.6.6.1
- RcppEigen 0.3.3.9.4
- RcppHNSW 0.5.0
- RcppML 0.3.7
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- RcppRoll 0.3.0
- RcppTOML 0.2.2
- Rdpack 2.6
- RdpackTester 1.0
- Rhdf5lib 1.24.1
- Rhtslib 2.2.0
- Rsamtools 2.16.0
- Rtsne 0.17
- Rttf2pt1 1.3.12
- S4Arrays 1.2.0
- S4Vectors 0.40.2
- ScaledMatrix 1.10.0
- Seurat 5.0.1
- SeuratData 0.2.2.9001
- SeuratDisk 0.0.0.9021
- SeuratObject 5.0.1
- SeuratWrappers 0.3.2
- Signac 1.12.0
- SingleCellExperiment 1.24.0
- SoupX 1.6.2
- SparseArray 1.2.2
- SparseM 1.81
- SummarizedExperiment 1.32.0
- TFBSTools 1.38.0
- TFMPvalue 0.0.9
- TFisher 0.2.0
- TH.data 1.1-2
- VennDiagram 1.7.3
- XML 3.99-0.16
- XVector 0.42.0
- abind 1.4-5
- annotate 1.78.0
- ape 5.7-1
- aplot 0.2.2
- ash 1.0-15
- askpass 1.2.0
- backports 1.4.1
- base64enc 0.1-3
- base 4.3.1
- beachmat 2.18.0
- beachtest 1.0.0
- beeswarm 0.4.0
- biomaRt 2.56.1
- bit64 4.0.5
- bit 4.0.5
- bitops 1.0-7
- blob 1.2.4
- boot 1.3-28
- brew 1.0-8
- brio 1.1.3
- broom 1.0.5
- bslib 0.6.1
- caTools 1.18.2
- cachem 1.0.8
- callr 3.7.3
- car 3.1-2
- carData 3.0-5
- cellranger 1.1.0
- circlize 0.4.15
- class 7.3-22
- cli 3.6.2
- clipr 0.8.0
- cluster 2.1.4
- clusterProfiler 4.10.0
- codetools 0.2-19
- collections 0.3.7
- colorspace 2.1-0
- colourpicker 1.3.0
- commonmark 1.9.0
- compiler 4.3.1
- corrplot 0.92
- cowplot 1.1.2
- cpp11 0.4.7
- crayon 1.5.2
- credentials 1.3.2
- crosstalk 1.2.1
- curl 5.2.0
- cyclocomp 1.1.0
- data.table 1.14.10
- datasets 4.3.1
- dbplyr 2.4.0
- deldir 2.0-2
- desc 1.4.2
- devtools 2.4.5
- diffobj 0.3.5
- digest 0.6.33
- dittoSeq 1.14.0
- doParallel 1.0.17
- dotCall64 1.1-1
- downlit 0.4.3
- downloader 0.4
- dplyr 1.1.4
- dqrng 0.3.2
- edgeR 4.0.3
- ellipsis 0.3.2
- enrichplot 1.22.0
- ensembldb 2.24.1
- evaluate 0.23
- extrafont 0.19
- extrafontdb 1.0
- fansi 1.0.6
- farver 2.1.1
- fastDummies 1.7.3
- fastmap 1.1.1
- fastmatch 1.1-4
- fgsea 1.28.0
- filelock 1.0.3
- fitdistrplus 1.1-11
- fontawesome 0.5.2
- foreach 1.5.2
- foreign 0.8-82
- formatR 1.14
- fs 1.6.3
- futile.logger 1.4.3
- futile.options 1.0.1
- future.apply 1.11.0
- future 1.33.0
- gargle 1.5.2
- generics 0.1.3
- gert 1.9.3
- ggExtra 0.10.1
- ggalluvial 0.12.5
- ggalt 0.4.0
- ggbeeswarm 0.7.2
- ggforce 0.4.1
- ggfun 0.1.3
- ggnewscale 0.4.9
- ggplot2 3.4.4
- ggplotify 0.1.2
- ggpubr 0.6.0
- ggraph 2.1.0
- ggrastr 1.0.2
- ggrepel 0.9.4
- ggridges 0.5.5
- ggsci 3.0.0
- ggsignif 0.6.4
- ggtree 3.10.0
- gh 1.4.0
- gitcreds 0.1.2
- glmGamPoi 1.12.2
- glmnet 4.1-8
- globals 0.16.2
- glue 1.6.2
- goftest 1.2-3
- googledrive 2.1.1
- googlesheets4 1.1.1
- gplots 3.1.3
- grDevices 4.3.1
- graphics 4.3.1
- graphlayouts 1.0.2
- grid 4.3.1
- gridExtra 2.3
- gridGraphics 0.5-1
- gson 0.1.0
- gtable 0.3.4
- gtools 3.9.5
- hdf5r 1.3.8
- here 1.0.1
- hexbin 1.28.3
- highr 0.10
- hms 1.1.3
- htmltools 0.5.7
- htmlwidgets 1.6.4
- httpuv 1.6.13
- httr2 0.2.3
- httr 1.4.7
- ica 1.0-3
- ids 1.0.1
- igraph 1.6.0
- ini 0.3.1
- irlba 2.3.5.1
- isoband 0.2.7
- iterators 1.0.14
- jquerylib 0.1.4
- jsonlite 1.8.8
- knitr 1.45
- labeling 0.4.3
- lambda.r 1.2.4
- languageserver 0.0.0.9000
- languageserver 0.3.15
- later 1.3.2
- lattice 0.21-8
- lazyeval 0.2.2
- leiden 0.4.3.1
- lifecycle 1.0.4
- limma 3.58.1
- lintr 3.1.0
- listenv 0.9.0
- lme4 1.1-35.1
- lmtest 0.9-40
- locfit 1.5-9.8
- magick 2.8.2
- magrittr 2.0.3
- maps 3.4.2
- mathjaxr 1.6-0
- matrixStats 1.2.0
- memoise 2.0.1
- metap 1.9
- methods 4.3.1
- mgcv 1.9-0
- mime 0.12
- miniUI 0.1.1.1
- minqa 1.2.6
- mnormt 2.1.1
- morebeach 1.0.0
- morebeachtests 1.0.0
- multcomp 1.4-25
- multtest 2.58.0
- munsell 0.5.0
- mutoss 0.1-13
- mvtnorm 1.2-4
- mvtnormAPI 1.0-0
- nlme 3.1-162
- nloptr 2.0.3
- nnet 7.3-19
- numDeriv 2016.8-1.1
- openssl 2.1.1
- org.Hs.eg.db 3.18.0
- org.testing.db 0.1
- pROC 1.18.5
- parallel 4.3.1
- parallelly 1.36.0
- patchwork 1.1.3
- pbapply 1.7-2
- pbdZMQ 0.3-9
- pbkrtest 0.5.2
- pheatmap 1.0.12
- pillar 1.9.0
- pkgbuild 1.4.2
- pkgconfig 2.0.3
- pkgdown 2.0.7
- pkgload 1.3.2.1
- plogr 0.2.0
- plotly 4.10.3
- plotrix 3.8-4
- plyr 1.8.9
- png 0.1-8
- polyclip 1.10-6
- polynom 1.4-1
- poweRlaw 0.70.6
- pracma 2.4.4
- praise 1.0.0
- presto 1.0.0
- prettyunits 1.2.0
- processx 3.8.2
- profvis 0.3.8
- progress 1.2.3
- progressr 0.14.0
- proj4 1.0-13
- promises 1.2.1
- ps 1.7.5
- purrr 1.0.2
- qqconf 1.3.2
- quantreg 5.97
- qvalue 2.34.0
- ragg 1.2.5
- rappdirs 0.3.3
- rbibutils 2.2.16
- rcmdcheck 1.4.0
- readr 2.1.4
- rematch2 2.1.2
- rematch 2.0.0
- remotes 2.4.2.1
- repr 1.1.6
- reshape2 1.4.4
- restfulr 0.0.15
- reticulate 1.34.0
- rex 1.2.1
- rhdf5 2.46.1
- rhdf5filters 1.14.1
- rjson 0.2.21
- rlang 1.1.2
- rmarkdown 2.25
- robustbase 0.99-1
- roxygen2 7.2.3
- rpart 4.1.19
- rprojroot 2.0.4
- rstatix 0.7.2
- rstudioapi 0.15.0
- rsvd 1.0.5
- rtracklayer 1.60.1
- rversions 2.1.2
- sandwich 3.1-0
- sass 0.4.8
- scales 1.3.0
- scater 1.30.1
- scattermore 1.2
- scatterpie 0.2.1
- sctransform 0.4.1
- scuttle 1.12.0
- seqLogo 1.66.0
- sessioninfo 1.2.2
- shadowtext 0.1.2
- shape 1.4.6
- shiny 1.8.0
- shinyBS 0.61.1
- shinydashboard 0.7.2
- shinyjs 2.1.0
- sitmo 2.0.2
- sn 2.1.1
- snow 0.4-4
- sourcetools 0.1.7-1
- sp 2.1-2
- spam 2.10-0
- sparseMatrixStats 1.14.0
- spatial 7.3-15
- spatstat.data 3.0-3
- spatstat.explore 3.2-5
- spatstat.geom 3.2-7
- spatstat.random 3.2-2
- spatstat.sparse 3.0-3
- spatstat.utils 3.0-4
- splines 4.3.1
- statmod 1.5.0
- stats4 4.3.1
- stats 4.3.1
- stringi 1.8.3
- stringr 1.5.1
- styler 1.10.1
- survival 3.5-5
- sys 3.4.2
- systemfonts 1.0.4
- tcltk 4.3.1
- tensor 1.5
- testRcppAttributePackage 1.0
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testthat 3.1.10
- textshaping 0.3.6
- tibble 3.2.1
- tidygraph 1.3.0
- tidyr 1.3.0
- tidyselect 1.2.0
- tidytree 0.4.6
- tinytex 0.49
- tools 4.3.1
- translations 4.3.1
- treeio 1.26.0
- tweenr 2.0.2
- tzdb 0.4.0
- urlchecker 1.0.1
- usethis 2.2.2
- utf8 1.2.4
- utils 4.3.1
- uuid 1.1-1
- uwot 0.1.16
- vctrs 0.6.5
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- viridis 0.6.4
- viridisLite 0.4.2
- vroom 1.6.5
- waldo 0.5.1
- whisker 0.4.1
- withr 2.5.2
- xfun 0.41
- xml2 1.3.6
- xmlparsedata 1.0.5
- xopen 1.0.0
- xtable 1.8-4
- yaml 2.3.8
- yulab.utils 0.1.1
- zip 2.3.0
- zlibbioc 1.48.0
- zoo 1.8-12
- ubuntu/adduser 3.118ubuntu5
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- ubuntu/alsa-topology-conf 1.2.5.1-2
- ubuntu/alsa-ucm-conf 1.2.6.3-1ubuntu1.7
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- ubuntu/i965-va-driver 2.4.1 dfsg1-1
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- ubuntu/init-system-helpers 1.62
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