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Package Usage : cran : fastmatch

Explore the latest package usage data for fastmatch in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 230
Total downloads: 251,004
Showing first 100 dependents

More details on packages.ecosyste.ms - JSON

btrspg/r-env cache

  • version: 1.1-4
Latest release: 8 months ago - 315 downloads - 2,231 dependencies
qdidiscoveryservices/ms_pipeline latest

  • version: 1.1-0
Latest release: almost 5 years ago - 3,042 downloads - 1,044 dependencies
veitveit/coexpresso 0d86fb51b4b4cdc9a21ad900ae0f30e1eb9e828f

  • version: 1.1-3
Latest release: 3 months ago - 443 downloads - 1,733 dependencies
genular/base_image 2.0.0

Base image used in PADNORA - https://github.com/genular/pandora

  • version: 1.1-3
Latest release: over 2 years ago - 356 downloads - 3,654 dependencies
vanessa/prostate-raps latest

Dockerized prostate cancer re-ocurrence and survival prediction

  • version: 1.0-4
Latest release: over 9 years ago - 263 downloads - 601 dependencies
btrspg/genekitr 0.0.1

  • version: 1.1-3
Latest release: over 1 year ago - 198 downloads - 1,987 dependencies
gnwanne/atac latest

  • version: 1.1-3
Latest release: almost 3 years ago - 30 downloads - 688 dependencies
gesiscss/binder-michaellomuscio-2dtidy-2dtext-2dmining-449af9 89b66d682ed8eb4be6eda48e573c7b8a606c7f1e

  • version: 1.1-0
Latest release: almost 6 years ago - 35 downloads - 1,574 dependencies
pvstodghill/pipeline-pirate 2023-11-20

  • version: 1.1-4
Latest release: about 2 years ago - 30 downloads - 347 dependencies
educative1/r_packages latest

  • version: 1.1-3
Latest release: about 3 years ago - 122 downloads - 831 dependencies
tariship/dev_sync_directories latest

  • version: 1.1-3
Latest release: about 2 years ago - 379 downloads - 421 dependencies
andimajore/unpast_eval_container_asthma latest

  • version: 1.1-3
Latest release: over 2 years ago - 142 downloads - 486 dependencies
hdsu/etbii2023 latest

  • version: 1.1-3
Latest release: almost 3 years ago - 138 downloads - 358 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 1.1-3
Latest release: about 3 years ago - 194 downloads - 382 dependencies
rocker/ropensci 3.4.1

  • version: 1.1-0
Latest release: about 8 years ago - 88,870 downloads - 1,589 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 1.1-0
Latest release: over 7 years ago - 443 downloads - 9,302 dependencies
sebrauschert/amplicon_pipeline v0.3.2

A pipeline for amplicon sequencing analysis of marine fish

  • version: 1.1-3
Latest release: over 2 years ago - 332 downloads - 571 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 1.1-3
Latest release: over 2 years ago - 155 downloads - 679 dependencies
sviatsidorov/granie_analysis 0.1

Analysis of gliogenesis in a mouse model using GRaNIE

  • version: 1.1-3
Latest release: almost 3 years ago - 98 downloads - 290 dependencies
evolomicsmbbt/rna_seq latest

  • version: 1.1-3
Latest release: almost 3 years ago - 138 downloads - 412 dependencies
intiquan/iqdesktop latest

  • version: 1.1-3
Latest release: over 2 years ago - 376 downloads - 3,511 dependencies
afcai2c/r-studio-geo latest

  • version: 1.1-0
Latest release: over 4 years ago - 269 downloads - 2,113 dependencies
rgregstacey/seurat_image 2.1

  • version: 1.1-3
Latest release: over 2 years ago - 113 downloads - 547 dependencies
ipbhalle/biobyte latest

  • version: 1.1-3
Latest release: over 2 years ago - 22 downloads - 1,311 dependencies
qdidiscoveryservices/seurat_cell_annotation latest

  • version: 1.1-3
Latest release: almost 3 years ago - 62 downloads - 699 dependencies
mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

  • version: 1.1-0
Latest release: over 7 years ago - 40 downloads - 9,414 dependencies
mattjmeier/r-odaf-hc-prod latest

  • version: 1.1-3
Latest release: almost 3 years ago - 50 downloads - 897 dependencies
brianyee/cropseq-essentials 1.0.0

  • version: 1.1-3
Latest release: over 2 years ago - 60 downloads - 2,274 dependencies
omicschef/rnaseqchef v1.1.6

RNAseqChef, an RNA-seq data controller highlighting gene expression features

  • version: 1.1-4
Latest release: 27 days ago - 1,916 downloads - 1,420 dependencies
chgyi/bio 3.5.1

  • version: 1.1-0
Latest release: about 7 years ago - 661 downloads - 1,077 dependencies
commander121/rmarkdown 4.4.0d-b4

  • version: 1.1-3
Latest release: 9 months ago - 907 downloads - 1,625 dependencies
nuest/reproducible-research-at-giscience latest

  • version: 1.1-0
Latest release: over 4 years ago - 154 downloads - 1,132 dependencies
mfsentma/atacseq latest

  • version: 1.1-3
Latest release: over 2 years ago - 34 downloads - 852 dependencies
chgyi/metaware_rna_denovo latest

  • version: 1.1-0
Latest release: over 6 years ago - 360 downloads - 2,095 dependencies
chlazaris/dge_env 0.1

  • version: 1.1-3
Latest release: over 2 years ago - 16 downloads - 320 dependencies
cgwyx/easymicrobiomer latest

The best practice for microbiome analysis using R

  • version: 1.1-3
Latest release: over 2 years ago - 47 downloads - 1,604 dependencies
cjchen/gxuclass 1.0

  • version: 1.1-3
Latest release: over 2 years ago - 19 downloads - 657 dependencies
fallingstar10/hbsigrocker latest

  • version: 1.1-3
Latest release: over 2 years ago - 256 downloads - 1,223 dependencies
avi156/rocker-binder-upd 4.2.2

  • version: 1.1-3
Latest release: almost 3 years ago - 21 downloads - 2,271 dependencies
evolbioinfo/r-evol v4.2.2

r with ape and big.phylo packages

  • version: 1.1-3
Latest release: over 2 years ago - 155 downloads - 594 dependencies
mziemann/enrichment_recipe latest

Example highly reproducible bioinformatics workflow including transcriptome and pathway analysis.

  • version: 1.1-3
Latest release: over 2 years ago - 54 downloads - 1,332 dependencies
genular/pandora 2.0.0

PANDORA - https://pandora.atomic-lab.org

  • version: 1.1-3
Latest release: over 2 years ago - 1,976 downloads - 3,716 dependencies
atttilacs/dsp_geomxtools latest

  • version: 1.1-3
Latest release: about 3 years ago - 114 downloads - 871 dependencies
albertea/numbat_light 02

  • version: 1.1-3
Latest release: over 2 years ago - 145 downloads - 301 dependencies
mattjmeier/r-odaf-hc latest

Under Development. Containerized version of the R-ODAF Health Canada Pipeline.

  • version: 1.1-3
Latest release: almost 3 years ago - 33 downloads - 598 dependencies
lishuangshuang3/dnbc4dev 2.0.3

  • version: 1.1-3
Latest release: over 2 years ago - 124 downloads - 1,043 dependencies
biocorecrg/microbiomeprofile 0.4

  • version: 1.1-3
Latest release: about 2 years ago - 106 downloads - 267 dependencies
etycksen/sc_deluxe 0.7

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

  • version: 1.1-3
Latest release: 7 months ago - 2,648 downloads - 757 dependencies
nikhil166/cellxgene_vip_docker v2.4

  • version: 1.1-3
Latest release: about 2 years ago - 365 downloads - 2,101 dependencies
kaizhang/scatac-bench 0.2.1

  • version: 1.1-3
Latest release: over 2 years ago - 440 downloads - 588 dependencies
gyusikhwang/tgs v1

  • version: 1.1-3
Latest release: over 2 years ago - 58 downloads - 1,095 dependencies
eduar2/cami latest

  • version: 1.1-3
Latest release: almost 3 years ago - 27 downloads - 211 dependencies
andimajore/unpast_eval_container_bc latest

  • version: 1.1-3
Latest release: over 2 years ago - 76 downloads - 486 dependencies
qdidiscoveryservices/pipeline_docker-r_and_bioconductor latest

  • version: 1.1-0
Latest release: about 5 years ago - 10 downloads - 431 dependencies
prosyslab/bug-bench-r-cran-fastmatch 20210805

  • version: 1.1-0
Latest release: over 4 years ago - 21 downloads - 3 dependencies
gesiscss/binder-christiankahmann-2dilcm-5fbinder-31aa1b 5f49926dc286efce35ab5d5d196ebb1863b462ae

  • version: 1.1-0
Latest release: almost 6 years ago - 20 downloads - 1,942 dependencies
dzhakparov/geneselectr-image latest

  • version: 1.1-3
Latest release: about 2 years ago - 157 downloads - 713 dependencies
jordannelsonepam/custom latest

  • version: 1.1-0
Latest release: about 3 years ago - 21 downloads - 203 dependencies
mikesiwenwu/eversus_benchmarking v7_s3test

  • version: 1.1-3
Latest release: over 2 years ago - 158 downloads - 579 dependencies
mpaltsai/biotextquest_top2vec 27122022

  • version: 1.1-3
Latest release: almost 3 years ago - 203 downloads - 476 dependencies
mattjmeier/r-odaf-hc-base latest

  • version: 1.1-3
Latest release: almost 3 years ago - 20 downloads - 598 dependencies
brusconi/seurat new

  • version: 1.1-3
Latest release: over 1 year ago - 146 downloads - 536 dependencies
stormgod/deepmaps-cpu latest

  • version: 1.1-3
Latest release: over 2 years ago - 114 downloads - 1,710 dependencies
lizzyr/pseudo_ko 1.0.3

  • version: 1.1-4
Latest release: over 2 years ago - 40 downloads - 379 dependencies
omicschef/epigenomechef v1.1.5

  • version: 1.1-4
Latest release: over 1 year ago - 414 downloads - 1,066 dependencies
gesiscss/binder-r2d-g5b5b759-gesiscss-2dpadme-5fbtw17-4c0a4e c588d8116da9ecb49ba42098267e6693942340b8

  • version: 1.1-3
Latest release: over 2 years ago - 107 downloads - 1,795 dependencies
cliu97/r4.3_seurat latest

  • version: 1.1-6
Latest release: over 2 years ago - 20 downloads - 776 dependencies
pecan/depends 4.0.2

Image that contains all the required external packages needed for PEcAn.

  • version: 1.1-4
Latest release: almost 5 years ago - 85,775 downloads - 1,274 dependencies
alexthiery/archr_seurat_signac_mega 3.2

  • version: 1.1-3
Latest release: about 2 years ago - 142 downloads - 441 dependencies
msgao/deseq2 latest

  • version: 1.1-3
Latest release: almost 3 years ago - 21 downloads - 384 dependencies
mengchen18/xcmsviewer_process latest

  • version: 1.1-3
Latest release: over 2 years ago - 55 downloads - 1,355 dependencies
payne6861/clutserprofiler v1.0.0

  • version: 1.1-3
Latest release: about 3 years ago - 13 downloads - 1,793 dependencies
r2bit/bit-edu-server latest

bit-edu is an open-source scientific and technical education environment built on Docker.

  • version: 1.1-3
Latest release: about 3 years ago - 236 downloads - 3,544 dependencies
yosuketanigawa/rstudio_yt latest

  • version: 1.1-3
Latest release: over 2 years ago - 207 downloads - 2,089 dependencies
sheddn/bioinformatics-tools latest

  • version: 1.1-3
Latest release: about 3 years ago - 56 downloads - 2,518 dependencies
elynrfw/gerald-test latest

  • version: 1.1-3
Latest release: almost 3 years ago - 36 downloads - 349 dependencies
njjai/genebasis latest

  • version: 1.1-3
Latest release: over 2 years ago - 43 downloads - 789 dependencies
compbiocore/dscov_sct 20221201

  • version: 1.1-3
Latest release: about 3 years ago - 44 downloads - 1,031 dependencies
gesiscss/binder-kozo2-2dsakigakemtg2019-214397 c9d150b74c2eb09683e7fadd99703bda92c291cd

  • version: 1.1-0
Latest release: almost 6 years ago - 16 downloads - 2,128 dependencies
evolbioinfo/treewas v1.0

A phylogenetic tree-based approach to genome-wide association studies in microbes

  • version: 1.1-0
Latest release: over 6 years ago - 35 downloads - 858 dependencies
compbiocore/lee_isg_erv 20230306

  • version: 1.1-3
Latest release: almost 3 years ago - 13 downloads - 1,038 dependencies
repbioinfo/transformgampoi latest

  • version: 1.1-4
Latest release: about 2 years ago - 41 downloads - 1,664 dependencies
jenfisher7/rstudio_sbae latest

  • version: 1.1-3
Latest release: almost 3 years ago - 30 downloads - 1,604 dependencies
bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

  • version: 1.1-4
Latest release: about 2 years ago - 110 downloads - 1,150 dependencies
jingxin/terrascpipe v0

  • version: 1.1-3
Latest release: almost 3 years ago - 141 downloads - 2,467 dependencies
koki/sctensor-workshop sha-fa8c4cf

  • version: 1.1-3
Latest release: about 4 years ago - 200 downloads - 2,087 dependencies
sagemathinc/compute-rlang-arm64 latest

  • version: 1.1-3
Latest release: about 2 years ago - 24 downloads - 2,723 dependencies
qdidiscoveryservices/diffbind latest

  • version: 1.1-3
Latest release: over 2 years ago - 44 downloads - 526 dependencies
keithomayot/nlp_ins metronic

  • version: 1.1-3
Latest release: over 2 years ago - 29 downloads - 852 dependencies
danhumassmed/debrowser 1.0.1

Software for Bioinformatics pipelines DEBrowser

  • version: 1.1-3
Latest release: over 2 years ago - 67 downloads - 1,319 dependencies
jackiezhuqi/bio-rstudio latest

  • version: 1.1-3
Latest release: over 2 years ago - 86 downloads - 1,158 dependencies
winuthayanon/rstudio 4.3.0

  • version: 1.1-3
Latest release: over 2 years ago - 153 downloads - 2,687 dependencies
markataylor/r_yufree v1.0.0

  • version: 1.1-3
Latest release: almost 3 years ago - 32 downloads - 1,514 dependencies
abelhj/rstudio 4.2.3

  • version: 1.1-3
Latest release: over 2 years ago - 53 downloads - 800 dependencies
crukmi/nas-app latest

  • version: 1.1-3
Latest release: about 3 years ago - 39 downloads - 701 dependencies
prangannath/rna_seq latest

Container for EvolOMICS RNA_Seq pipeline

  • version: 1.1-3
Latest release: almost 3 years ago - 115 downloads - 1,382 dependencies
treecoutheo/phylter_docker 0.9.11-1

PhylteR, a tool for analyzing, visualizing and filtering phylogenomics datasets

  • version: 1.1-3
Latest release: about 2 years ago - 139 downloads - 661 dependencies
gesiscss/binder-ssnn-2dairr-2drepcred-9e07f7 e68c2846fb6fd48559d9bb9c191b4e9389b2bccf

  • version: 1.1-0
Latest release: almost 6 years ago - 44 downloads - 2,091 dependencies
bioinformaticsmusc/ploidy-ngs latest

  • version: 1.1-3
Latest release: over 2 years ago - 42 downloads - 1,181 dependencies
shl198/rna_ppl latest

  • version: 1.1-3
Latest release: almost 3 years ago - 24 downloads - 2,099 dependencies