Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
Package Usage : cran : Rcpp
Explore the latest package usage data for Rcpp in the cran ecosystem, including detailed information on package dependencies and their usage.
Total dependents: 2,407
Total downloads: 212,393,342
More details on packages.ecosyste.ms - JSON
jupyter/all-spark-notebook x86_64-spark-3.5.0
Python, Scala, R and Spark Jupyter Notebook Stack from https://github.com/jupyter/docker-stacks
- version: 1.0.11
broadinstitute/genomes-in-the-cloud 2.4.0-1501007820
Genomes-in-the-cloud is a genomic analysis pipeline project developed by the Broad Institute.
- version: 0.12.12
jupyter/datascience-notebook x86_64-python-3.11.6
Data Science Jupyter Notebook Python Stack from https://github.com/jupyter/docker-stacks
- version: 1.0.11
broadinstitute/gatk 4.5.0.0
Official release repository for GATK versions 4.x
- version: 1.0.6
rocker/tidyverse 4.3.2
Version-stable build of R, rstudio, and R packages
- version: 1.0.11
openanalytics/shinyproxy-demo latest
Image to demo how to deploy Shiny apps using ShinyProxy
- version: 1.0.8.3
apache/zeppelin 0.11.0
Apache Zeppelin
- version: 1.0.6
rocker/shiny 4.3.2
- version: 1.0.11
coala/base pre
A simple docker image featuring coala and it's dependencies.
- version: 0.12.12
jupyter/r-notebook x86_64-python-3.11.6
R Jupyter Notebook Stack from https://github.com/jupyter/docker-stacks
- version: 1.0.11
broadinstitute/gatk3 3.8-1
Official release repository for GATK versions 3.x
- version: 0.12.17
rocker/verse 4.3.2
Adds tex & related publishing packages to version-locked tidyverse image
- version: 1.0.11
rocker/geospatial 4.3.2
Docker-based Geospatial toolkit for R, built on versioned Rocker images
- version: 1.0.11
nfcore/rnaseq dev
Docker Image for nf-core/rnaseq project.
- version: 1.0.4.6
bioconductor/bioconductor_docker devel-R-devel
Bioconductor Docker Images
- version: 1.0.11
rocker/shiny-verse 4.3.2
Rocker Shiny image + Tidyverse R packages. Uses version-stable images.
- version: 1.0.11
veupathdb/rserve 7
- version: 1.0.10
rocker/r-apt disco
R-related apt-get information
- version: 1.0.3
broadinstitute/viral-core latest
- version: 1.0.4.6
ccdlstaging/dr_downloaders 549216c6fa7f6c80a5d78287c8814330f150428c
- version: 1.0.10
dit4c/dit4c-container-qgis latest
DIT4C image for QGIS
- version: 0.12.9
ashish1981/x86-r-z-appln latest
- version: 1.0.4.6
broadinstitute/gtex_eqtl V10
GTEx Consortium: eQTL pipeline based on FastQTL
- version: 1.0.8.3
ashish1981/shinyapp-sarb latest
- version: 1.0.6
broadinstitute/terra-jupyter-aou 8bf6b13
- version: 1.0.9, 1.0.8.3
ccdlstaging/dr_affymetrix f30409aceba66e19235b21b4ca8899e318e02e30
- version: 1.0.7
rocker/binder 4.3.2
Adds binder to rocker/tidyverse, providing JupyterHub access on rocker containers
- version: 1.0.11
rocker/ropensci latest
- version: 0.12.16
broadinstitute/gatk-nightly 2024-01-06-4.5.0.0-3-gb68fadc5f-NIGHTLY-SNAPSHOT
Official repository for nightly development builds of the GATK
- version: 1.0.6
rocker/ml 4.3.2
Docker images with R + GPU support for machine learning libraries
- version: 1.0.11
ccdlstaging/dr_salmon f30409aceba66e19235b21b4ca8899e318e02e30
- version: 1.0.10
nfcore/atacseq latest
A Docker container for the nf-core/atacseq pipeline.
- version: 1.0.6
nfcore/chipseq dev
A docker image for nf-core/chipseq
- version: 1.0.6
ashish1981/s390x-r-appln-z latest
- version: 1.0.6
180a51c0/gh-action-buildapp latest
- version: 1.0.4.6
dhspence/docker-basespace_chromoseq latest
- version: 1.0.2
nfcore/mag dev
- version: 1.0.6
nfcore/eager 2.5.0
A Docker image for the nf-core/eager pipeline.
- version: 1.0.9
nfcore/smrnaseq dev
A Docker container for the nf-core/smrnaseq pipeline.
- version: 1.0.6
rocker/r-parallel 1.0.1
- version: 1.0.2
tabbzi/terra-dogagingproject-genomic-reports latest
Low-pass sequencing data processing for the Dog Aging Project
- version: 1.0.7
rocker/ml-verse 4.3.2
- version: 1.0.11
broadinstitute/viral-ngs latest
See: https://viral-ngs.readthedocs.io/en/latest/
- version: 1.0.2
nfcore/rnafusion fusioninspector_2.8.0dev
A Docker image for the nf-core/rnafusion pipeline.
- version: 1.0.8.3
mirekphd/ml-cpu-r40-rs-cust 20230912
- version: 1.0.11
dhspence/docker-genomic-analysis 122121
From Chris Miller's example
- version: 1.0.7
fazenda/rsmd 64c1b962-4-14
- version: 1.0.9
rocker/cuda 4.3.2
NVIDIA CUDA libraries added to Rocker images
- version: 1.0.11
mirekphd/ml-cpu-r36-rs-cust latest
- version: 1.0.9
ccdlstaging/dr_no_op 549216c6fa7f6c80a5d78287c8814330f150428c
- version: 1.0.7
ashish1981/zreferenceimplementation d17052022
- version: 1.0.4.6
ocdr/dkube-datascience-rs-tf-cpu-multiuser v2.6-18
- version: 1.0.4.6
vanallenlab/sv-pipeline filter_gt_029fa3b
- version: 1.0.10
nfcore/ampliseq dev
A Docker image for nf-core/ampliseq.
- version: 1.0.2
biocontainers/assemblytics v1.0ds-1-deb_cv1
- version: 1.0.0
rocker/tensorflow 3.6.1
Tensorflow & Keras libraries for machine learning (CPU version)
- version: 1.0.3
biocontainers/qcumber v1.0.14dfsg-1-deb_cv1
- version: 1.0.0
biocontainers/ea-utils v1.1.2dfsg-5-deb_cv1
- version: 1.0.0
izone/hadoop ecosystem
Hadoop 2.8.5 Ecosystem fully distributed, Jupyter Notebook, RStudio Server, Julia, jdbc implement
- version: 0.12.18
hzibraunschweig/sormas-rscript 3.5-5.2022.5
- version: 1.0.11
biocontainers/trinityrnaseq v2.6.6dfsg-6-deb_cv1
- version: 1.0.0
biocontainers/nanook v1.33dfsg-1-deb_cv1
- version: 1.0.0
rocker/r-rmd latest
Rocker container for Rmarkdown packages
- version: 1.0.4.6
biocontainers/paleomix v1.2.13.3-1-deb_cv1
- version: 1.0.0
biocontainers/roary v3.12.0dfsg-2-deb_cv1
- version: 1.0.0
biocontainers/snakemake v5.4.0-1-deb_cv1
- version: 1.0.0
biocontainers/surankco v0.0.r5dfsg-2-deb_cv1
- version: 1.0.0
artemklevtsov/r-alpine pkgdev
R docker images based on the alpine:latest
- version: 0.12.17
openanalytics/r-shiny latest
Ubuntu 20.04 LTS with R and Shiny
- version: 1.0.7
mirekphd/ml-cpu-r36-base latest
- version: 1.0.8.3
ashish1981/s390x-r-shiny latest
- version: 1.0.6
gesiscss/binder-juliasilge-2dsupervised-2dml-2dcase-2dstudies-2dcourse-1b08b0 eb13b6477d79950a9873e0966bd3aaaa0d043059
- version: 1.0.5
gesiscss/binder-rubydata-2dbinder-af0da2 b77e1d22eafca6c2ba3a22a8c4ea723b24f7c07e
- version: 1.0.6
hylleraas/singleuser 27
- version: 1.0.8
tabbzi/terra-dogagingproject-data-curation latest
- version: 1.0.8
broadinstitute/viral-assemble latest
- version: 1.0.4.6
broadinstitute/viral-phylo 2.0.21.5
- version: 1.0.4.6
mesosphere/mesosphere-data-toolkit latest
- version: 1.0.0
kbase/kbase sdkbase.latest
- version: 0.12.0