Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : biomaRt

Explore the latest package usage data for biomaRt in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 253
Total downloads: 204,614

More details on packages.ecosyste.ms - JSON

broadinstitute/terra-jupyter-aou 8bf6b13

  • version: 2.54.0
Latest release: almost 2 years ago - 92,816 downloads - 4,112 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 2.56.1
Latest release: about 1 year ago - 21,613 downloads - 10,962 dependencies
dhspence/docker-genomic-analysis 122121

From Chris Miller's example

  • version: 2.42.1
Latest release: almost 3 years ago - 19,678 downloads - 1,294 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 2.38.0
Latest release: over 2 years ago - 13,673 downloads - 11,684 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 2.38.0
Latest release: over 2 years ago - 6,685 downloads - 12,259 dependencies
biocontainers/isee-galaxy v3.13_cv1.0.0

  • version: 2.49.2
Latest release: about 3 years ago - 3,660 downloads - 1,218 dependencies
nfcore/circrna dev

Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.

  • version: 2.42.0
Latest release: about 2 years ago - 1,202 downloads - 654 dependencies
nfcore/nanoseq dev

Nanopore demultiplexing, QC and alignment pipeline

  • version: 2.46.0
Latest release: almost 4 years ago - 9,677 downloads - 340 dependencies
nfcore/scrnaseq dev

A Docker Container for the nf-core/scrnaseq pipeline.

  • version: 2.42.0
Latest release: over 3 years ago - 7,707 downloads - 423 dependencies
mirekphd/ml-cpu-r35-rs 20190201

  • version: 2.38.0
Latest release: almost 6 years ago - 762 downloads - 9,716 dependencies
veitveit/isolabeledprotocol latest

Discontinued, see github.com/ProtProtocols/IsoProt for updates

  • version: 2.34.2
Latest release: about 6 years ago - 715 downloads - 2,000 dependencies
dhspence/docker-sicer latest

  • version: 2.36.1
Latest release: almost 6 years ago - 765 downloads - 1,147 dependencies
dhspence/docker-basestation latest

  • version: 2.36.1
Latest release: over 5 years ago - 308 downloads - 1,132 dependencies
qdidiscoveryservices/py3_cellranger 6.1.2

  • version: 2.44.0
Latest release: about 3 years ago - 302 downloads - 1,375 dependencies
veitveit/complexbrowser release-1.6

  • version: 2.54.0, 2.58.0
Latest release: 12 months ago - 316 downloads - 1,296 dependencies
dhspence/docker-dss latest

  • version: 2.42.0
Latest release: over 4 years ago - 367 downloads - 1,127 dependencies
biocontainers/bioconductor-cummerbund v2.16.0-2-deb_cv1

  • version: 2.30.0
Latest release: over 6 years ago - 502 downloads - 576 dependencies
biocontainers/bioconductor-variantannotation v1.20.2-1b1-deb_cv1

  • version: 2.30.0
Latest release: over 6 years ago - 529 downloads - 457 dependencies
biocontainers/bioconductor-ensembldb v1.6.2-1-deb_cv1

  • version: 2.30.0
Latest release: over 6 years ago - 522 downloads - 498 dependencies
biocontainers/bioconductor-biomart v2.30.0-1-deb_cv1

  • version: 2.30.0
Latest release: over 6 years ago - 519 downloads - 424 dependencies
biocontainers/bioconductor-biovizbase v1.22.0-2-deb_cv1

  • version: 2.30.0
Latest release: over 6 years ago - 477 downloads - 568 dependencies
koki/sctensor-experiments 20220208

  • version: 2.50.3
Latest release: almost 3 years ago - 206 downloads - 2,071 dependencies
koki/biocdev 20230818

  • version: 2.57.1
Latest release: over 1 year ago - 201 downloads - 1,504 dependencies
anand7899/rmarkdown latest

  • version: 2.54.0
Latest release: about 2 years ago - 262 downloads - 766 dependencies
hoonbiolab/hmftools v1.1

  • version: 2.48.0
Latest release: about 3 years ago - 1,211 downloads - 693 dependencies
biocontainers/bioconductor-gviz v1.18.1-1-deb_cv1

  • version: 2.30.0
Latest release: over 6 years ago - 156 downloads - 572 dependencies
chgyi/bio 3.5.1

  • version: 2.36.1
Latest release: about 6 years ago - 158 downloads - 1,077 dependencies
biocontainers/bioconductor-genomicfeatures v1.26.2-1-deb_cv1

  • version: 2.30.0
Latest release: over 6 years ago - 140 downloads - 453 dependencies
dhspence/docker-manta 1.5.0

  • version: 2.36.1
Latest release: almost 6 years ago - 126 downloads - 1,191 dependencies
dhspence/docker-hiccompare latest

  • version: 2.42.0
Latest release: over 3 years ago - 113 downloads - 1,271 dependencies
kcapd/wings-genomics latest

WINGS workflow system with software for genomics operations.

  • version: 2.30.0
Latest release: about 4 years ago - 103 downloads - 1,468 dependencies
mirekphd/ml-cpu-r35-rdp 20180918

  • version: 2.36.1
Latest release: about 6 years ago - 93 downloads - 9,486 dependencies
crukmi/mesa main

  • version: 2.53.2
Latest release: about 2 years ago - 91 downloads - 1,326 dependencies
testalabgh/downstream signac-1.4.0

  • version: 2.50.3
Latest release: over 1 year ago - 485 downloads - 3,517 dependencies
veitveit/isoprot latest

  • version: 2.38.0
Latest release: over 5 years ago - 86 downloads - 2,182 dependencies
mlepetit/ranalysis 3.3.4

  • version: 2.48.3
Latest release: about 2 years ago - 79 downloads - 2,131 dependencies
chriswyatt/goatee_biomart latest

  • version: 2.50.1
Latest release: almost 3 years ago - 95 downloads - 229 dependencies
koki/rstudio_mesh latest

  • version: 2.51.0
Latest release: about 3 years ago - 67 downloads - 1,389 dependencies
koki/annotationhub 20210323

  • version: 2.46.3
Latest release: over 3 years ago - 73 downloads - 1,250 dependencies
gesiscss/binder-statomics-2dsga2019-4a5361 1c74d6b57a18a85f98e3380f8356a4a6b5413520

  • version: 2.42.0
Latest release: almost 5 years ago - 55 downloads - 1,313 dependencies
tipsarin/rstudio 4.1.3viraltrack

  • version: 2.50.3
Latest release: almost 2 years ago - 54 downloads - 981 dependencies
lorentzb/gene8940_r 1.0

  • version: 2.54.0
Latest release: almost 2 years ago - 55 downloads - 926 dependencies
dhspence/docker-vep 93

  • version: 2.36.1
Latest release: over 5 years ago - 53 downloads - 1,191 dependencies
doejgi/trinityrnaseq-wdl 2.11.0b

  • version: 2.42.0, 2.54.0
Latest release: over 1 year ago - 331 downloads - 980 dependencies
maestsi/nf-m6anet v1

  • version: 2.46.3
Latest release: almost 2 years ago - 54 downloads - 645 dependencies
khoulaha/jabba v1.0.0

  • version: 2.54.0
Latest release: almost 2 years ago - 42 downloads - 2,527 dependencies
koki/tensor-projects-machima 20220827

  • version: 2.52.0
Latest release: about 2 years ago - 49 downloads - 1,441 dependencies
hoonbiolab/pepatac v1.1

  • version: 2.48.2
Latest release: about 3 years ago - 43 downloads - 1,213 dependencies
crukmi/mesa_dependencies latest

  • version: 2.54.1
Latest release: over 1 year ago - 63 downloads - 1,393 dependencies
broadcptacdev/panoply_so_nmf_report 9bb503e

  • version: 2.42.1
Latest release: over 1 year ago - 95 downloads - 725 dependencies
trust1/rbox v1

Methylation array work toolbox

  • version: 2.46.3
Latest release: over 1 year ago - 48 downloads - 912 dependencies
veitveit/isoptmprot latest

  • version: 2.40.0
Latest release: over 5 years ago - 38 downloads - 2,207 dependencies
veitveit/coexpresso latest

  • version: 2.50.3
Latest release: over 2 years ago - 39 downloads - 1,733 dependencies
dmiller15/minfi 4.2.0

  • version: 2.52.0
Latest release: over 2 years ago - 35 downloads - 1,415 dependencies
kcapd/wings-genomics-full latest

  • version: 2.30.0
Latest release: almost 4 years ago - 33 downloads - 1,502 dependencies
mirekphd/ml-cpu-r36-rs 20200131

  • version: 2.38.0
Latest release: almost 5 years ago - 34 downloads - 10,669 dependencies
hoonbiolab/variantannotation_r v1.1

  • version: 2.42.1
Latest release: about 3 years ago - 36 downloads - 828 dependencies
robsyme/cosmo latest

  • version: 2.54.0
Latest release: almost 2 years ago - 29 downloads - 543 dependencies
mattjmeier/r-odaf-hc-prod latest

  • version: 2.54.0
Latest release: almost 2 years ago - 35 downloads - 897 dependencies
koki/velocytor 20221015

  • version: 2.52.0
Latest release: about 2 years ago - 39 downloads - 1,452 dependencies
koki/workflow 20210327

  • version: 2.46.3
Latest release: over 3 years ago - 40 downloads - 1,265 dependencies
jpsmith5/peppro latest

  • version: 2.54.0
Latest release: almost 2 years ago - 29 downloads - 1,163 dependencies
alanocallaghan/high-dimensional-stats-r latest

  • version: 2.55.0
Latest release: almost 2 years ago - 91 downloads - 1,601 dependencies
sagnikbanerjee15/ngpint 1.0.0

  • version: 2.51.1
Latest release: almost 3 years ago - 28 downloads - 2,335 dependencies
hoonbiolab/titan v1.1

  • version: 2.42.1
Latest release: about 3 years ago - 29 downloads - 754 dependencies
haileyzhang/lfq-analyst v1.2.6

A docker container for LFQ-Analyst

  • version: 2.54.1
Latest release: 12 months ago - 89 downloads - 1,496 dependencies
keithgraham5/cnvrobot_v4_2 latest

  • version: 2.42.0
Latest release: almost 2 years ago - 21 downloads - 685 dependencies
mlepetit/rnormalisation 1.0

  • version: 2.48.3
Latest release: almost 2 years ago - 33 downloads - 2,142 dependencies
sheddn/bioinformatics-tools latest

  • version: 2.50.3
Latest release: almost 2 years ago - 41 downloads - 2,518 dependencies
etretiakov/workbench-session-complete jammy-2023.10.24-custom-12.5

  • version: 2.56.1
Latest release: about 1 year ago - 58 downloads - 6,961 dependencies
biodancer/nasap_performance latest

write later

  • version: 2.50.2
Latest release: almost 2 years ago - 18 downloads - 2,006 dependencies
mbaardwijk/hmftools latest

  • version: 2.50.0
Latest release: over 1 year ago - 25 downloads - 405 dependencies
haileyzhang/fragpipe-analyst v0.23

A Docker container of Fragpipe-Analyst

  • version: 2.54.1
Latest release: over 1 year ago - 34 downloads - 1,511 dependencies
yiluxiangbei/pumpkin-genomealign-notebook 1.0

  • version: 2.50.1
Latest release: almost 3 years ago - 13 downloads - 2,028 dependencies
yiluxiangbei/pumpkin-gene-genomealign 20220216

  • version: 2.50.1
Latest release: almost 3 years ago - 14 downloads - 2,116 dependencies
gnwanne/decontx latest

  • version: 2.54.0
Latest release: almost 2 years ago - 18 downloads - 938 dependencies
entsupml/r-with-libraries latest

  • version: 2.54.0
Latest release: almost 2 years ago - 14 downloads - 992 dependencies
qdidiscoveryservices/ubuntu-1604-pipeline_docker-r_and_bioconductor latest

  • version: 2.42.1
Latest release: about 4 years ago - 13 downloads - 1,153 dependencies
skoyamamd/scoreinvhap latest

  • version: 2.50.3
Latest release: over 2 years ago - 14 downloads - 662 dependencies
dhspence/docker-wg-basestation latest

  • version: 2.42.0
Latest release: about 4 years ago - 13 downloads - 1,126 dependencies
lemoniada/test pipeline

  • version: 2.54.0
Latest release: almost 2 years ago - 13 downloads - 1,181 dependencies
qdidiscoveryservices/sc_pip_r_and_py latest

  • version: 2.46.0
Latest release: almost 4 years ago - 12 downloads - 1,097 dependencies
intelliseqngs/bioconductor r-coverage-stats_v0.1

  • version: 2.42.0
Latest release: almost 5 years ago - 13 downloads - 185 dependencies
kisudsoe/r-base latest

  • version: 2.54.1
Latest release: over 1 year ago - 83 downloads - 1,107 dependencies
haileyzhang/phospho-analyst v1.0.1

  • version: 2.54.1
Latest release: about 1 year ago - 50 downloads - 796 dependencies
broadcptacdev/activedriver latest

  • version: 2.42.1
Latest release: over 1 year ago - 27 downloads - 720 dependencies
mtorresm55/r_env_4_1_0 v1.0

  • version: 2.50.0
Latest release: almost 2 years ago - 14 downloads - 354 dependencies
mattjmeier/r-odaf-hc latest

Under Development. Containerized version of the R-ODAF Health Canada Pipeline.

  • version: 2.54.0
Latest release: almost 2 years ago - 13 downloads - 598 dependencies
bioconductor/ismb.osca 124cbc0

  • version: 2.56.1
Latest release: over 1 year ago - 299 downloads - 1,422 dependencies
jpsmith5/rpipe 0.3.1

  • version: 2.54.0
Latest release: almost 2 years ago - 12 downloads - 262 dependencies
qdidiscoveryservices/seurat_tidyverse latest

  • version: 2.46.3
Latest release: over 3 years ago - 12 downloads - 435 dependencies
alexthiery/archr 3.1

  • version: 2.50.3
Latest release: over 1 year ago - 133 downloads - 819 dependencies
abelean/seurat_azimuth 5b

  • version: 2.50.3
Latest release: over 1 year ago - 343 downloads - 1,141 dependencies
markataylor/r_yufree v1.0.0

  • version: 2.54.0
Latest release: almost 2 years ago - 14 downloads - 1,514 dependencies
sparktx/gviz 1.40.1

  • version: 2.52.0
Latest release: almost 2 years ago - 11 downloads - 288 dependencies