Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
Package Usage : cran : lambda.r
Explore the latest package usage data for lambda.r in the cran ecosystem, including detailed information on package dependencies and their usage.
Total dependents: 631
Total downloads: 2,762,114
More details on packages.ecosyste.ms - JSON
veupathdb/rserve 7
- version: 1.2.4
broadinstitute/gtex_eqtl V10
GTEx Consortium: eQTL pipeline based on FastQTL
- version: 1.2.4
broadinstitute/terra-jupyter-aou 8bf6b13
- version: 1.2.4
ccdlstaging/dr_affymetrix f30409aceba66e19235b21b4ca8899e318e02e30
- version: 1.2.4
nfcore/methylseq dev
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel.
- version: 1.2.4
rocker/ropensci latest
- version: 1.2.2
nfcore/atacseq latest
A Docker container for the nf-core/atacseq pipeline.
- version: 1.2.4
biocontainers/control-freec v11.5_cv1
- version: 1.1.7
nfcore/chipseq dev
A docker image for nf-core/chipseq
- version: 1.2.4
nfcore/eager 2.5.0
A Docker image for the nf-core/eager pipeline.
- version: 1.2.4
mirekphd/ml-cpu-r40-rs-cust 20230912
- version: 1.2.4
dhspence/docker-genomic-analysis 122121
From Chris Miller's example
- version: 1.2.4
mirekphd/ml-cpu-r36-rs-cust latest
- version: 1.2.4
nfcore/ampliseq dev
A Docker image for nf-core/ampliseq.
- version: 1.2.4
mirekphd/ml-cpu-r36-base latest
- version: 1.2.4
biocontainers/isee-galaxy v3.13_cv1.0.0
- version: 1.2.4
qdidiscoveryservices/ms_pipeline latest
- version: 1.2.4
patroonorg/patroondeps latest
- version: 1.2.4
dhspence/docker-biscuit latest
- version: 1.2.3
nfcore/airrflowreport dev
- version: 1.2.4
biocontainers/ipo develop
A Tool for automated Optimization of XCMS Parameters
- version: 1.2
nfcore/circrna dev
Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.
- version: 1.2.4
nfcore/sarek 2.7.2
A Docker container for the nf-core/sarek pipeline
- version: 1.2.4
nfcore/slamseq dev
A docker image for nf-core/slamseq
- version: 1.2.4
nfcore/hic dev
A docker container for the nf-core/hic pipeline.
- version: 1.2.4
nfcore/nanoseq dev
Nanopore demultiplexing, QC and alignment pipeline
- version: 1.2.4
nfcore/scrnaseq dev
A Docker Container for the nf-core/scrnaseq pipeline.
- version: 1.2.4
nfcore/diaproteomics dev
A Docker container for nf-core/diaproteomics
- version: 1.2.4
mirekphd/ml-cpu-r35-rs 20190201
- version: 1.2.3
veitveit/isolabeledprotocol latest
Discontinued, see github.com/ProtProtocols/IsoProt for updates
- version: 1.2.3
prismcmap/depmap_versions dd55695d58fb
- version: 1.2.4
dhspence/docker-homer latest
docker with chip-seq tool homer
- version: 1.2.3
nfcore/exoseq dev
A docker container for the ExoSeq pipeline
- version: 1.2.3
nfcore/lncpipe dev
A Docker image for nf-core/lncpipe
- version: 1.2.3
seglh/exomedepth f4716ad
- version: 1.2.4
gene110/nipt_report latest
- version: 1.2.4
gesiscss/binder-arnim-2dstmdemo-166b8a 3c29f7eaee928ba308137abb0effe5998f8ffa52
- version: 1.2.3
prismcmap/drc-module robust_DRC
- version: 1.2.4
veitveit/vsclust release-1.2.1
For more details, see https://bitbucket.org/veitveit/vsclust
- version: 1.2.4
dhspence/docker-sicer latest
- version: 1.2.3
qdidiscoveryservices/limma-voom 4.2.0
- version: 1.2.4
qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2
- version: 1.2.4
prismcmap/norm-module 26be7aa8ab48
- version: 1.2.4
dhspence/docker-basestation latest
- version: 1.2.3
qdidiscoveryservices/py3_cellranger 6.1.2
- version: 1.2.4
mirekphd/ml-cpu-r35-jnb devel_2b2752c
- version: 1.2.3
dhspence/docker-dss latest
- version: 1.2.4
koki/pagoda latest
- version: 1.1.9
biocontainers/bioconductor-rsamtools v1.26.1-2b1-deb_cv1
- version: 1.1.9
biocontainers/bioconductor-cummerbund v2.16.0-2-deb_cv1
- version: 1.1.9
biocontainers/bioconductor-bsgenome v1.42.0-2-deb_cv1
- version: 1.1.9
biocontainers/bioconductor-variantannotation v1.20.2-1b1-deb_cv1
- version: 1.1.9
biocontainers/bioconductor-ensembldb v1.6.2-1-deb_cv1
- version: 1.1.9
biocontainers/bioconductor-shortread v1.32.0-1b1-deb_cv1
- version: 1.1.9
tercen/runtime-flowsuite 3.15-4
- version: 1.2.4
cimendes/splicing-pipelines-nf 3.1.ubuntu
- version: 1.2.4
biocontainers/bioconductor-genomicalignments v1.10.0-1b1-deb_cv1
- version: 1.1.9
biocontainers/bioconductor-biocparallel v1.8.1-1-deb_cv1
- version: 1.1.9
biocontainers/bioconductor-biovizbase v1.22.0-2-deb_cv1
- version: 1.1.9
koki/sctensor-experiments 20220208
- version: 1.2.4
evolbioinfo/deseq2 v1.28.1
- version: 1.2.4
qdidiscoveryservices/scrna_downstream 1.1
- version: 1.2.4
recetox/ramclustr 1.1.0-recetox0
- version: 1.2.4
koki/biocdev 20230818
- version: 1.2.4
anand7899/rmarkdown latest
- version: 1.2.4
prismcmap/sushi develop
- version: 1.2.4
ctomlins/minion_qc latest
- version: 1.2.3
hoonbiolab/hmftools v1.1
- version: 1.2.4
qdidiscoveryservices/bam_to_10x_counts latest
- version: 1.2.4
broadinstitute/pcawg_broad_wgs_variant_callers mutect_2percent_floor
pcawg_broad_wgs_variant_callers
- version: 1.2
biocontainers/bioconductor-rtracklayer v1.34.1-1-deb_cv1
- version: 1.1.9
biocontainers/bioconductor-gviz v1.18.1-1-deb_cv1
- version: 1.1.9
chgyi/bio 3.5.1
- version: 1.2.3
evolbioinfo/minionqc v1.4.1
Quality control for MinION sequencing data
- version: 1.2.3
canaantt/notitia-ocpu latest
This is part of zager/notitia.
- version: 1.2
biocontainers/bioconductor-deseq2 v1.14.1-1-deb_cv1
- version: 1.1.9
broadinstitute/pcawg_full 7
- version: 1.1.9
biocontainers/bioconductor-genomicfeatures v1.26.2-1-deb_cv1
- version: 1.1.9
chgyi/metaware_rna_denovo latest
- version: 1.2.3
mirekphd/ml-cpu-r35-nx devel_fdbf539
- version: 1.2.3
dhspence/docker-manta 1.5.0
- version: 1.2.3
dhspence/docker-hiccompare latest
- version: 1.2.4
peterdjames/r_base_with_packs_incl_rkdb r-base
- version: 1.2.4
koki/sctensor-workshop sha-fa8c4cf
- version: 1.2.4
atttilacs/dsp_geomxtools latest
- version: 1.2.4
koki/reductdims latest
- version: 1.2.4
kcapd/wings-genomics latest
WINGS workflow system with software for genomics operations.
- version: 1.2.3
atttilacs/seurat_big latest
- version: 1.2.4
broadinstitute/pcawg_tokens latest
- version: 1.1.9
mirekphd/ml-cpu-r35-rdp 20180918
- version: 1.2.3
jafoltz/scclassify latest
- version: 1.2.4
crukmi/mesa main
- version: 1.2.4