Data

Tools

Indexes

Applications

Experiments

Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : RANN

Explore the latest package usage data for RANN in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 277
Total downloads: 287,903
Showing first 100 dependents

More details on packages.ecosyste.ms - JSON

qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 2.6.1
Latest release: about 2 years ago - 4,404 downloads - 1,464 dependencies
atingupta2005/rocker_tidyverse latest

  • version: 2.6.1
Latest release: about 6 years ago - 69 downloads - 1,055 dependencies
btrspg/r-env cache

  • version: 2.6.1
Latest release: 8 months ago - 315 downloads - 2,231 dependencies
ocdr/ds-apps 1.0.43

  • version: 2.6.1
Latest release: almost 2 years ago - 3,932 downloads - 3,778 dependencies
koki/urchin_workflow_seurat 20250213

  • version: 2.6.1
Latest release: 10 months ago - 183 downloads - 1,471 dependencies
vanessa/seurat latest

  • version: 2.6
Latest release: over 7 years ago - 54 downloads - 475 dependencies
genular/base_image 2.0.0

Base image used in PADNORA - https://github.com/genular/pandora

  • version: 2.6.1
Latest release: over 2 years ago - 356 downloads - 3,654 dependencies
mlepetit/ranalysis 3.3.4

  • version: 2.6.1
Latest release: about 3 years ago - 221 downloads - 2,131 dependencies
afcai2c/r-studio-aiml latest

  • version: 2.6.1
Latest release: about 3 years ago - 57 downloads - 1,442 dependencies
gnwanne/atac latest

  • version: 2.6.1
Latest release: almost 3 years ago - 30 downloads - 688 dependencies
yosuketanigawa/rocker-geospatial-seurat latest

Docker image of Seurat installed on R Studio

  • version: 2.6.1
Latest release: over 2 years ago - 149 downloads - 512 dependencies
tariship/dev_sync_directories latest

  • version: 2.6.1
Latest release: about 2 years ago - 379 downloads - 421 dependencies
almahmoud/workshops-auto-spectratutorials latest

  • version: 2.6.1
Latest release: over 3 years ago - 89 downloads - 2,003 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 2.6.1
Latest release: about 3 years ago - 194 downloads - 382 dependencies
rocker/ropensci 3.4.1

  • version: 2.5.1
Latest release: about 8 years ago - 88,870 downloads - 1,589 dependencies
cheyne0328/rstudio zxy

  • version: 2.6.1
Latest release: over 2 years ago - 24 downloads - 775 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 2.6
Latest release: over 7 years ago - 443 downloads - 9,302 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 2.6.1
Latest release: over 2 years ago - 155 downloads - 679 dependencies
evolomicsmbbt/rna_seq latest

  • version: 2.6.1
Latest release: almost 3 years ago - 138 downloads - 412 dependencies
nathanprovin/cellcom 1.2.2

  • version: 2.6.1
Latest release: over 2 years ago - 147 downloads - 596 dependencies
matzieb/shiny-4.0.3-seurat4-spatial latest

  • version: 2.6.1
Latest release: over 2 years ago - 20 downloads - 1,061 dependencies
rgregstacey/seurat_image 2.1

  • version: 2.6.1
Latest release: over 2 years ago - 113 downloads - 547 dependencies
payne6861/stereonote_non_conda_scmerge_seurat_harmony_batchelor_cca v1.0.0

stereonote_non_conda_scmerge_seurat_harmony_batchelor_cca

  • version: 2.6.1
Latest release: almost 3 years ago - 81 downloads - 1,943 dependencies
ipbhalle/biobyte latest

  • version: 2.6.1
Latest release: over 2 years ago - 22 downloads - 1,311 dependencies
recetox/xmsanalyzer 2.0.6.1-recetox1

  • version: 2.6.1
Latest release: about 5 years ago - 59 downloads - 588 dependencies
mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

  • version: 2.5.1
Latest release: over 7 years ago - 40 downloads - 9,414 dependencies
qdidiscoveryservices/seurat_cell_annotation latest

  • version: 2.6.1
Latest release: almost 3 years ago - 62 downloads - 699 dependencies
tipsarin/kubeflow-rstudio latest

rstudio for kubeflow

  • version: 2.6.1
Latest release: almost 4 years ago - 62 downloads - 1,312 dependencies
koki/velocytor 20221015

  • version: 2.6.1
Latest release: about 3 years ago - 62 downloads - 1,452 dependencies
ghhenry/curio-seeker-pipeline latest

  • version: 2.6.1
Latest release: about 3 years ago - 37 downloads - 926 dependencies
brianyee/cropseq-essentials 1.0.0

  • version: 2.6.1
Latest release: over 2 years ago - 60 downloads - 2,274 dependencies
commander121/rmarkdown 4.4.0d-b4

  • version: 2.6.1
Latest release: 9 months ago - 907 downloads - 1,625 dependencies
koki/bindsc 20220609

  • version: 2.6.1
Latest release: over 3 years ago - 52 downloads - 2,060 dependencies
uabbds/zebrafish_telencephalon_atlas_app 1.0.0

  • version: 2.6.1
Latest release: over 2 years ago - 308 downloads - 1,409 dependencies
jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

  • version: 2.6.1
Latest release: over 2 years ago - 302 downloads - 1,173 dependencies
mshriver01/share_task_seurat latest

  • version: 2.6.1
Latest release: over 2 years ago - 394 downloads - 1,637 dependencies
mfsentma/atacseq latest

  • version: 2.6.1
Latest release: over 2 years ago - 34 downloads - 852 dependencies
alexthiery/archr 3.1

  • version: 2.6.1
Latest release: over 2 years ago - 202 downloads - 819 dependencies
fallingstar10/hbsigrocker latest

  • version: 2.6.1
Latest release: over 2 years ago - 256 downloads - 1,223 dependencies
avi156/rocker-binder-upd 4.2.2

  • version: 2.6.1
Latest release: almost 3 years ago - 21 downloads - 2,271 dependencies
nilesh0404/st_visualizer m1_0.1.2

  • version: 2.6.1
Latest release: about 2 years ago - 18 downloads - 1,422 dependencies
alexthiery/schelper seurat-schelper-0.3.5

  • version: 2.6.1
Latest release: over 2 years ago - 389 downloads - 1,494 dependencies
mlepetit/rnormalisation 1.0.0

  • version: 2.6.1
Latest release: about 3 years ago - 94 downloads - 2,142 dependencies
chiajungl/scrna-extra 4.4.0-4.4

  • version: 2.6.1
Latest release: over 1 year ago - 866 downloads - 1,350 dependencies
luisas/rde latest

  • version: 2.6.1
Latest release: almost 5 years ago - 47 downloads - 549 dependencies
genular/pandora 2.0.0

PANDORA - https://pandora.atomic-lab.org

  • version: 2.6.1
Latest release: over 2 years ago - 1,976 downloads - 3,716 dependencies
uvarc/rstudio tam5xe

  • version: 2.6.1
Latest release: about 2 years ago - 35 downloads - 1,062 dependencies
natalie23gill/seurat-4-3_soupx-1-6-1_doubletfinder_67fb8b5 1.4

scRNA analysis- a collection of current tools, file used to build it is copied into /

  • version: 2.6.1
Latest release: over 2 years ago - 273 downloads - 1,392 dependencies
jafoltz/sc_python 8

  • version: 2.6.1
Latest release: over 2 years ago - 122 downloads - 438 dependencies
daltoncp/rstudio_celeganssinglecell 4.2_12

  • version: 2.6.1
Latest release: over 2 years ago - 293 downloads - 529 dependencies
lishuangshuang3/dnbc4dev 2.0.3

  • version: 2.6.1
Latest release: over 2 years ago - 124 downloads - 1,043 dependencies
luisas/r_sc.simg latest

  • version: 2.6.1
Latest release: about 5 years ago - 18 downloads - 260 dependencies
dpraveen511/spot spot_ec2

  • version: 2.6.1
Latest release: about 2 years ago - 220 downloads - 287 dependencies
stefanucciluca/tregopathies latest

  • version: 2.6.1
Latest release: over 2 years ago - 86 downloads - 488 dependencies
etycksen/sc_deluxe 0.7

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

  • version: 2.6.1
Latest release: 7 months ago - 2,648 downloads - 757 dependencies
qdidiscoveryservices/seurat_tidyverse latest

  • version: 2.6.1
Latest release: almost 5 years ago - 13 downloads - 435 dependencies
nikhil166/cellxgene_vip_docker v2.4

  • version: 2.6.1
Latest release: about 2 years ago - 365 downloads - 2,101 dependencies
kaizhang/scatac-bench 0.2.1

  • version: 2.6.1
Latest release: over 2 years ago - 440 downloads - 588 dependencies
gyusikhwang/tgs v1

  • version: 2.6.1
Latest release: over 2 years ago - 58 downloads - 1,095 dependencies
granatumx/gbox-cellid-sctype 1.0.2

  • version: 2.6.1
Latest release: over 2 years ago - 91 downloads - 201 dependencies
qdidiscoveryservices/pipeline_docker-r_and_bioconductor latest

  • version: 2.6.1
Latest release: about 5 years ago - 10 downloads - 431 dependencies
jaredlander/odsceast2023_credit_best v1

  • version: 2.6.1
Latest release: over 2 years ago - 27 downloads - 302 dependencies
mshriver01/share_task_archr latest

  • version: 2.6.1
Latest release: over 2 years ago - 91 downloads - 1,364 dependencies
bixbeta/czid v6

updated to https://github.com/chanzuckerberg/czid-cli/releases/tag/v6.0.0

  • version: 2.6.1
Latest release: over 1 year ago - 51 downloads - 421 dependencies
dzhakparov/geneselectr-image latest

  • version: 2.6.1
Latest release: about 2 years ago - 157 downloads - 713 dependencies
mknudson/share_task_cell_annotation mei-cell-annotation

  • version: 2.6.1
Latest release: about 2 years ago - 147 downloads - 316 dependencies
qdidiscoveryservices/flower v3

  • version: 2.6.1
Latest release: over 2 years ago - 64 downloads - 1,066 dependencies
mikesiwenwu/eversus_benchmarking v7_s3test

  • version: 2.6.1
Latest release: over 2 years ago - 158 downloads - 579 dependencies
brusconi/seurat new

  • version: 2.6.1
Latest release: over 1 year ago - 146 downloads - 536 dependencies
stormgod/deepmaps-cpu latest

  • version: 2.6.1
Latest release: over 2 years ago - 114 downloads - 1,710 dependencies
lizzyr/pseudo_ko 1.0.3

  • version: 2.6.1
Latest release: over 2 years ago - 40 downloads - 379 dependencies
apollodorus/polyglot v1

  • version: 2.6.1
Latest release: about 3 years ago - 65 downloads - 428 dependencies
ucigenomics/cellchatnotebook 2.1.2

  • version: 2.6.1
Latest release: over 1 year ago - 35 downloads - 1,564 dependencies
nfancy/scflow 0.7.4

  • version: 2.6.1
Latest release: almost 2 years ago - 300 downloads - 778 dependencies
qdidiscoveryservices/pseudobulk 2.0.2

  • version: 2.6.1
Latest release: over 1 year ago - 589 downloads - 1,112 dependencies
cliu97/r4.3_seurat latest

  • version: 2.6.2
Latest release: over 2 years ago - 20 downloads - 776 dependencies
payne6861/seurat v1.0.0

  • version: 2.6.1
Latest release: about 3 years ago - 16 downloads - 1,862 dependencies
alexthiery/archr_seurat_signac_mega 3.2

  • version: 2.6.1
Latest release: about 2 years ago - 142 downloads - 441 dependencies
msgao/deseq2 latest

  • version: 2.6.1
Latest release: almost 3 years ago - 21 downloads - 384 dependencies
mengchen18/xcmsviewer_process latest

  • version: 2.6.1
Latest release: over 2 years ago - 55 downloads - 1,355 dependencies
bixbeta/pavian v1

  • version: 2.6.1
Latest release: about 3 years ago - 14 downloads - 388 dependencies
zwcdocker/seurat latest

  • version: 2.6.1
Latest release: about 3 years ago - 20 downloads - 655 dependencies
r2bit/bit-edu-server latest

bit-edu is an open-source scientific and technical education environment built on Docker.

  • version: 2.6.1
Latest release: about 3 years ago - 236 downloads - 3,544 dependencies
yosuketanigawa/rstudio_yt latest

  • version: 2.6.1
Latest release: over 2 years ago - 207 downloads - 2,089 dependencies
andrewsg/archr dev

  • version: 2.6.1
Latest release: almost 2 years ago - 173 downloads - 1,356 dependencies
sheddn/bioinformatics-tools latest

  • version: 2.6.1
Latest release: about 3 years ago - 56 downloads - 2,518 dependencies
elynrfw/gerald-test latest

  • version: 2.6.1
Latest release: almost 3 years ago - 36 downloads - 349 dependencies
chiajungl/scrna 4.4.0-4.4

  • version: 2.6.1
Latest release: over 1 year ago - 135 downloads - 1,312 dependencies
compbiocore/dscov_sct 20221201

  • version: 2.6.1
Latest release: about 3 years ago - 44 downloads - 1,031 dependencies
koki/crandev 20230814

  • version: 2.6.1
Latest release: over 2 years ago - 229 downloads - 1,329 dependencies
luisas/rdeanalysis latest

  • version: 2.6.1
Latest release: over 5 years ago - 55 downloads - 508 dependencies
almahmoud/terra-jupyter bioc

  • version: 2.6.1
Latest release: about 3 years ago - 73 downloads - 2,217 dependencies
daltoncp/rstudio_celegansbulksequencing 4.2_3

  • version: 2.6.1
Latest release: over 2 years ago - 60 downloads - 1,562 dependencies
repbioinfo/transformgampoi latest

  • version: 2.6.1
Latest release: about 2 years ago - 41 downloads - 1,664 dependencies
ysong09/dsci-310-group-14 latest

  • version: 2.6.1
Latest release: almost 3 years ago - 63 downloads - 664 dependencies
jenfisher7/rstudio_sbae latest

  • version: 2.6.1
Latest release: almost 3 years ago - 30 downloads - 1,604 dependencies
jingxin/terrascpipe v0

  • version: 2.6.1
Latest release: almost 3 years ago - 141 downloads - 2,467 dependencies
gene110/nipt_combinereport_wcx v0

  • version: 2.6.1
Latest release: almost 3 years ago - 47 downloads - 674 dependencies
koki/sctensor-workshop sha-fa8c4cf

  • version: 2.6.1
Latest release: about 4 years ago - 200 downloads - 2,087 dependencies
sagemathinc/compute-rlang-arm64 latest

  • version: 2.6.1
Latest release: about 2 years ago - 24 downloads - 2,723 dependencies