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Package Usage : cran : qvalue

Explore the latest package usage data for qvalue in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 142
Total downloads: 185,748
Showing first 100 dependents

More details on packages.ecosyste.ms - JSON

btrspg/r-env cache

  • version: 2.34.0
Latest release: 8 months ago - 315 downloads - 2,231 dependencies
koki/urchin_workflow_seurat 20250213

  • version: 2.30.0
Latest release: 9 months ago - 183 downloads - 1,471 dependencies
qdidiscoveryservices/ms_pipeline latest

  • version: 2.22.0
Latest release: almost 5 years ago - 3,042 downloads - 1,044 dependencies
veitveit/coexpresso 0d86fb51b4b4cdc9a21ad900ae0f30e1eb9e828f

  • version: 2.26.0
Latest release: 3 months ago - 443 downloads - 1,733 dependencies
btrspg/genekitr 0.0.1

  • version: 2.32.0
Latest release: over 1 year ago - 198 downloads - 1,987 dependencies
jolespin/veba_binning-viral 2.5.1

  • version: 2.30.0
Latest release: 7 months ago - 470 downloads - 214 dependencies
tariship/dev_sync_directories latest

  • version: 2.30.0
Latest release: about 2 years ago - 379 downloads - 421 dependencies
andimajore/unpast_eval_container_asthma latest

  • version: 2.10.0
Latest release: over 2 years ago - 142 downloads - 486 dependencies
hdsu/etbii2023 latest

  • version: 2.26.0
Latest release: almost 3 years ago - 138 downloads - 358 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 2.30.0
Latest release: almost 3 years ago - 149 downloads - 382 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 2.12.0
Latest release: over 7 years ago - 443 downloads - 9,302 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 2.32.0
Latest release: over 2 years ago - 155 downloads - 679 dependencies
sviatsidorov/granie_analysis 0.1

Analysis of gliogenesis in a mouse model using GRaNIE

  • version: 2.30.0
Latest release: over 2 years ago - 98 downloads - 290 dependencies
mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

  • version: 2.12.0
Latest release: over 7 years ago - 40 downloads - 9,414 dependencies
mattjmeier/r-odaf-hc-prod latest

  • version: 2.30.0
Latest release: almost 3 years ago - 50 downloads - 897 dependencies
brianyee/cropseq-essentials 1.0.0

  • version: 2.26.0
Latest release: over 2 years ago - 60 downloads - 2,274 dependencies
omicschef/rnaseqchef v1.1.4

RNAseqChef, an RNA-seq data controller highlighting gene expression features

  • version: 2.32.0
Latest release: 11 months ago - 1,365 downloads - 1,420 dependencies
chgyi/bio 3.5.1

  • version: 2.12.0
Latest release: about 7 years ago - 661 downloads - 1,077 dependencies
biocontainers/bioconductor-qvalue v2.6.0-1-deb_cv1

  • version: 2.6.0
Latest release: over 7 years ago - 165 downloads - 434 dependencies
mfsentma/atacseq latest

  • version: 2.26.0
Latest release: over 2 years ago - 34 downloads - 852 dependencies
chgyi/metaware_rna_denovo latest

  • version: 2.14.1
Latest release: over 6 years ago - 360 downloads - 2,095 dependencies
cjchen/gxuclass 1.0

  • version: 2.32.0
Latest release: over 2 years ago - 19 downloads - 657 dependencies
mziemann/enrichment_recipe latest

Example highly reproducible bioinformatics workflow including transcriptome and pathway analysis.

  • version: 2.30.0
Latest release: over 2 years ago - 54 downloads - 1,332 dependencies
mattjmeier/r-odaf-hc latest

Under Development. Containerized version of the R-ODAF Health Canada Pipeline.

  • version: 2.30.0
Latest release: almost 3 years ago - 33 downloads - 598 dependencies
belindabgarana/dmea 20230705

Drug mechanism enrichment analysis

  • version: 2.30.0
Latest release: over 2 years ago - 20 downloads - 842 dependencies
crpeters/r-methylkit 4.2.1

  • version: 2.30.0
Latest release: almost 3 years ago - 80 downloads - 383 dependencies
biocorecrg/microbiomeprofile 0.4

  • version: 2.26.0
Latest release: about 2 years ago - 106 downloads - 267 dependencies
etycksen/sc_deluxe 0.7

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

  • version: 2.30.0
Latest release: 7 months ago - 2,648 downloads - 757 dependencies
gyusikhwang/tgs v1

  • version: 2.26.0
Latest release: over 2 years ago - 57 downloads - 1,095 dependencies
etretiakov/workbench-session-complete jammy-2024.09.19-custom-12.9

  • version: 2.32.0
Latest release: about 1 year ago - 1,187 downloads - 6,961 dependencies
andimajore/unpast_eval_container_bc latest

  • version: 2.10.0
Latest release: about 2 years ago - 76 downloads - 486 dependencies
qdidiscoveryservices/pipeline_docker-r_and_bioconductor latest

  • version: 2.18.0
Latest release: about 5 years ago - 10 downloads - 431 dependencies
mattjmeier/r-odaf-hc-base latest

  • version: 2.30.0
Latest release: almost 3 years ago - 20 downloads - 598 dependencies
stormgod/deepmaps-cpu latest

  • version: 2.30.0
Latest release: over 2 years ago - 96 downloads - 1,710 dependencies
omicschef/epigenomechef v1.1.5

  • version: 2.32.0
Latest release: over 1 year ago - 414 downloads - 1,066 dependencies
payne6861/clutserprofiler v1.0.0

  • version: 2.26.0
Latest release: almost 3 years ago - 13 downloads - 1,793 dependencies
muhengliao/r_docker2 genome

  • version: 2.22.0
Latest release: over 1 year ago - 346 downloads - 515 dependencies
compbiocore/dscov_sct 20221201

  • version: 2.30.0
Latest release: almost 3 years ago - 44 downloads - 1,031 dependencies
gesiscss/binder-kozo2-2dsakigakemtg2019-214397 c9d150b74c2eb09683e7fadd99703bda92c291cd

  • version: 2.18.0
Latest release: almost 6 years ago - 16 downloads - 2,128 dependencies
malachycamp/db_r_122lts v3.5

  • version: 2.32.0
Latest release: over 2 years ago - 148 downloads - 825 dependencies
compbiocore/lee_isg_erv 20230306

  • version: 2.30.0
Latest release: over 2 years ago - 13 downloads - 1,038 dependencies
jenfisher7/rstudio_sbae latest

  • version: 2.30.0
Latest release: almost 3 years ago - 30 downloads - 1,604 dependencies
bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

  • version: 2.32.0
Latest release: about 2 years ago - 110 downloads - 1,150 dependencies
koki/sctensor-workshop sha-fa8c4cf

  • version: 2.25.0
Latest release: about 4 years ago - 200 downloads - 2,087 dependencies
qdidiscoveryservices/diffbind latest

  • version: 2.32.0
Latest release: over 2 years ago - 44 downloads - 526 dependencies
danhumassmed/debrowser 1.0.1

Software for Bioinformatics pipelines DEBrowser

  • version: 2.30.0
Latest release: over 2 years ago - 67 downloads - 1,319 dependencies
jackiezhuqi/bio-rstudio latest

  • version: 2.30.0
Latest release: over 2 years ago - 76 downloads - 1,158 dependencies
winuthayanon/rstudio 4.3.0

  • version: 2.32.0
Latest release: over 2 years ago - 153 downloads - 2,687 dependencies
markataylor/r_yufree v1.0.0

  • version: 2.30.0
Latest release: almost 3 years ago - 32 downloads - 1,514 dependencies
shl198/rna_ppl latest

  • version: 2.28.0
Latest release: almost 3 years ago - 24 downloads - 2,099 dependencies
btrspg/vscode-dkd-env latest

  • version: 2.26.0
Latest release: over 2 years ago - 59 downloads - 1,182 dependencies
chgyi/rdev 3.5.1

  • version: 2.12.0
Latest release: about 7 years ago - 30 downloads - 435 dependencies
payne6861/stereonote_non_conda_clusterprofiler_enrichplot v1.0.1

stereonote_non_conda_clusterprofiler_enrichplot

  • version: 2.26.0
Latest release: almost 3 years ago - 20 downloads - 1,689 dependencies
imegusu/rstudio_rnaseq_all3 latest

RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq

  • version: 2.30.0
Latest release: over 2 years ago - 33 downloads - 1,568 dependencies
mfsentma/rna latest

  • version: 2.26.0
Latest release: over 2 years ago - 12 downloads - 807 dependencies
firriver/crvs latest

  • version: 2.26.0
Latest release: over 2 years ago - 53 downloads - 1,490 dependencies
ycli1995/bioinfo_dev 1.1.0

  • version: 2.32.0
Latest release: over 1 year ago - 185 downloads - 4,337 dependencies
mercury/nf_qc_scrna v2

  • version: 2.22.0
Latest release: over 2 years ago - 39 downloads - 548 dependencies
jieliu4wustl/wustl hisat3n

  • version: 2.30.0, 2.18.0
Latest release: almost 2 years ago - 5,675 downloads - 1,124 dependencies
chaunceyzhou/awesome_rnaseq v2.0

  • version: 2.18.0
Latest release: over 1 year ago - 83 downloads - 465 dependencies
jinlongru/viroprofiler-dvf latest

  • version: 2.12.0
Latest release: almost 3 years ago - 35 downloads - 241 dependencies
wyangwu/r4.1.2 latest

  • version: 2.26.0
Latest release: over 2 years ago - 93 downloads - 827 dependencies
byjin/sqtl 2.0

r docker for sqtl-seeker2( try )

  • version: 2.30.0
Latest release: almost 3 years ago - 50 downloads - 557 dependencies
omicsclass/pan-genome v1.0

  • version: 2.30.0
Latest release: over 2 years ago - 237 downloads - 3,108 dependencies
weishwu/diffbind 3.6.5

  • version: 2.28.0
Latest release: over 2 years ago - 31 downloads - 1,507 dependencies
viascientific/deseq2-docker 2.0

  • version: 2.30.0
Latest release: over 2 years ago - 134 downloads - 375 dependencies
compbiocore/jupyterhub-docker-images-jh_image 20230524

  • version: 2.30.0
Latest release: over 2 years ago - 139 downloads - 3,115 dependencies
bioxfu/xseurat2 latest

  • version: 2.30.0
Latest release: almost 3 years ago - 69 downloads - 982 dependencies
wlc27/dcanr v1

  • version: 2.30.0
Latest release: almost 3 years ago - 82 downloads - 1,681 dependencies
koji11235/rnaseq_env latest

  • version: 2.18.0
Latest release: almost 3 years ago - 83 downloads - 981 dependencies
porchard/tensorqtl_dev 0124d74

  • version: 2.30.0
Latest release: over 2 years ago - 91 downloads - 606 dependencies
preethiilumina/diffbind 1.5.1

fixed genome name

  • version: 2.30.0
Latest release: 11 months ago - 319 downloads - 626 dependencies
louisk92/spapros_scpnmf v1.0

  • version: 2.32.0
Latest release: over 2 years ago - 48 downloads - 1,422 dependencies
kobedr/bismark_alignment_utils latest

  • version: 2.26.0
Latest release: about 2 years ago - 37 downloads - 596 dependencies
bianca7/mompreprocess latest

  • version: 2.33.0
Latest release: over 2 years ago - 415 downloads - 1,340 dependencies
fallingstar10/gmadeomicsrocker tiny

  • version: 2.32.0
Latest release: over 1 year ago - 84 downloads - 1,224 dependencies
phenomedb/phenomedb-api-npc latest

  • version: 2.30.0
Latest release: over 2 years ago - 30 downloads - 1,310 dependencies
koki/tensor-projects-fly 20230516

  • version: 2.32.0
Latest release: over 2 years ago - 82 downloads - 222 dependencies
haokimriid/r-base latest

  • version: 2.32.0
Latest release: over 2 years ago - 20 downloads - 385 dependencies
jylin2022/r_svg_giotto latest

  • version: 2.30.0
Latest release: over 2 years ago - 40 downloads - 910 dependencies
andyvs/testimage 3.0

  • version: 2.30.0
Latest release: over 2 years ago - 47 downloads - 376 dependencies
cbgr/cager261 1.4

Container for the CAGEr tool version 2.6.1.

  • version: 2.32.0
Latest release: almost 2 years ago - 72 downloads - 1,356 dependencies
bianca7/clusterprofiler latest

  • version: 2.33.0
Latest release: over 2 years ago - 55 downloads - 1,315 dependencies
alfredshawn/wgbs_r 1.1

  • version: 2.26.0
Latest release: over 2 years ago - 32 downloads - 437 dependencies
fgualdr/env_gsea latest

  • version: 2.30.0
Latest release: over 2 years ago - 57 downloads - 566 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 2.32.0
Latest release: about 2 years ago - 29,205 downloads - 10,962 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 2.28.0
Latest release: over 3 years ago - 18,717 downloads - 11,684 dependencies
bigomics/omicsplayground v3.5.24

Self-service analytics for big omics data

  • version: 2.26.0
Latest release: 7 months ago - 52,691 downloads - 1,551 dependencies
biocontainers/trinityrnaseq v2.6.6dfsg-6-deb_cv1

  • version: 2.14.1
Latest release: about 6 years ago - 8,008 downloads - 831 dependencies
qdidiscoveryservices/ubuntu-1604-pipeline_docker-r_and_bioconductor latest

  • version: 2.18.0
Latest release: about 5 years ago - 13 downloads - 1,153 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 2.28.0
Latest release: over 3 years ago - 10,241 downloads - 12,259 dependencies
kbase/kbase sdkbase.latest

  • version: 1.36.0
Latest release: over 7 years ago - 4,331 downloads - 2,934 dependencies
tamaraperteghella/r4_hormonit latest

  • version: 2.26.0
Latest release: over 2 years ago - 27 downloads - 1,528 dependencies
chgyi/trinity 2.8.4

  • version: 2.10.0
Latest release: over 6 years ago - 21 downloads - 795 dependencies
cplaisier/ccafv2_extra latest

  • version: 2.30.0
Latest release: about 2 years ago - 29 downloads - 1,463 dependencies
bixbeta/cluster_profiler v1

  • version: 2.22.0
Latest release: almost 3 years ago - 18 downloads - 1,038 dependencies
viascientific/rstudio-app 1.0

  • version: 2.30.0
Latest release: over 2 years ago - 127 downloads - 1,074 dependencies
anusuiya/new latest

  • version: 2.30.0
Latest release: over 2 years ago - 17 downloads - 1,329 dependencies