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Package Usage : cran : hdf5r

Explore the latest package usage data for hdf5r in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 218
Total downloads: 1,311,832
Showing first 100 dependents

More details on packages.ecosyste.ms - JSON

qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 1.3.8
Latest release: about 2 years ago - 4,362 downloads - 1,464 dependencies
btrspg/r-env cache

  • version: 1.3.8
Latest release: 7 months ago - 315 downloads - 2,231 dependencies
ocdr/ds-apps 1.0.43

  • version: 1.3.8
Latest release: almost 2 years ago - 3,932 downloads - 3,778 dependencies
inseefrlab/travail-collaboratif 0.1.0

  • version: 1.3.7
Latest release: almost 3 years ago - 192 downloads - 1,119 dependencies
vanessa/seurat latest

  • version: 1.0.0
Latest release: over 7 years ago - 54 downloads - 475 dependencies
mlepetit/ranalysis 3.3.4

  • version: 1.3.4
Latest release: almost 3 years ago - 221 downloads - 2,131 dependencies
prismcmap/biomarker 4602f53feb5a

  • version: 1.3.5
Latest release: 8 months ago - 10,896 downloads - 633 dependencies
prismcmap/sushi v0.0.2

  • version: 1.3.8
Latest release: almost 4 years ago - 1,331 downloads - 723 dependencies
yosuketanigawa/rocker-geospatial-seurat latest

Docker image of Seurat installed on R Studio

  • version: 1.3.8
Latest release: over 2 years ago - 120 downloads - 512 dependencies
tariship/dev_sync_directories latest

  • version: 1.3.8
Latest release: about 2 years ago - 379 downloads - 421 dependencies
gesiscss/binder-darribas-2dgds-5fucm19-a1b96e 27cbafcf6a865910a18b835a4efc47e9fd532696

  • version: 1.0.1
Latest release: almost 6 years ago - 80 downloads - 1,567 dependencies
rocker/binder 4.4.1

Adds binder to rocker/tidyverse, providing JupyterHub access on rocker containers

  • version: 1.3.8
Latest release: over 1 year ago - 107,789 downloads - 2,239 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 1.3.7
Latest release: almost 3 years ago - 149 downloads - 382 dependencies
rocker/ropensci 3.4.1

  • version: 1.0.0
Latest release: about 8 years ago - 88,870 downloads - 1,589 dependencies
prismcmap/base-clue-pseq v0.0.1

  • version: 1.3.8
Latest release: almost 4 years ago - 114 downloads - 318 dependencies
cheyne0328/rstudio zxy

  • version: 1.3.8
Latest release: over 2 years ago - 24 downloads - 775 dependencies
nathanprovin/cellcom 1.2.2

  • version: 1.3.8
Latest release: over 2 years ago - 147 downloads - 596 dependencies
gesiscss/binder-wlandau-2dlearndrake-4eaf31 37504de3434ab3b0fedf8680a95efeeb605bef4d

  • version: 1.2.0
Latest release: over 5 years ago - 107 downloads - 447 dependencies
prismcmap/drc MTS028_PMTS079

  • version: 1.3.5
Latest release: 4 months ago - 6,370 downloads - 651 dependencies
matzieb/shiny-4.0.3-seurat4-spatial latest

  • version: 1.3.8
Latest release: over 2 years ago - 20 downloads - 1,061 dependencies
gesiscss/binder-r2d-g5b5b759-2i2c-2dorg-2dutoronto-2dr-2dimage-f9fba3 5e7aea3c30ff4157e2fe53e17b295f2e719b97a3

  • version: 1.3.9
Latest release: about 1 year ago - 21 downloads - 2,291 dependencies
nuest/altrnative-paper latest

  • version: 1.2.0
Latest release: almost 6 years ago - 46 downloads - 1,178 dependencies
recetox/xmsanalyzer 2.0.6.1-recetox1

  • version: 1.3.2
Latest release: about 5 years ago - 59 downloads - 588 dependencies
qdidiscoveryservices/seurat_cell_annotation latest

  • version: 1.3.7
Latest release: almost 3 years ago - 62 downloads - 699 dependencies
koki/velocytor 20221015

  • version: 1.3.7
Latest release: about 3 years ago - 62 downloads - 1,452 dependencies
gesiscss/binder-ajstewartlang-2dbinder-5fdemo-a82af5 b2c39fc6050f1879a6707e4a703da12f7c935b1f

  • version: 1.2.0
Latest release: almost 6 years ago - 32 downloads - 1,176 dependencies
prismcmap/normalization EPS005

  • version: 1.3.5
Latest release: 4 months ago - 1,176 downloads - 627 dependencies
koki/bindsc 20220609

  • version: 1.3.5
Latest release: over 3 years ago - 43 downloads - 2,060 dependencies
pieratio/shinyc19 latest

  • version: 1.3.8
Latest release: over 2 years ago - 93 downloads - 1,130 dependencies
mshriver01/share_task_seurat latest

  • version: 1.3.8
Latest release: over 2 years ago - 394 downloads - 1,637 dependencies
nuest/reproducible-research-at-giscience latest

  • version: 1.3.2
Latest release: over 4 years ago - 154 downloads - 1,132 dependencies
avi156/rocker-binder-upd 4.2.2

  • version: 1.3.7
Latest release: almost 3 years ago - 21 downloads - 2,271 dependencies
nilesh0404/st_visualizer m1_0.1.2

  • version: 1.3.8
Latest release: about 2 years ago - 18 downloads - 1,422 dependencies
alexthiery/schelper seurat-schelper-0.3.5

  • version: 1.3.5
Latest release: over 2 years ago - 389 downloads - 1,494 dependencies
inseefrlab/onyxia-r ds-r4.1.2-gpu-2022.09.08

A R environment with a collection of standard data science packages.

  • version: 1.3.5
Latest release: about 3 years ago - 285 downloads - 2,202 dependencies
mlepetit/rnormalisation 1.0.0

  • version: 1.3.4
Latest release: almost 3 years ago - 64 downloads - 2,142 dependencies
chiajungl/scrna-extra 4.4.0-4.4

  • version: 1.3.8
Latest release: over 1 year ago - 866 downloads - 1,350 dependencies
uvarc/rstudio tam5xe

  • version: 1.3.8
Latest release: about 2 years ago - 35 downloads - 1,062 dependencies
natalie23gill/seurat-4-3_soupx-1-6-1_doubletfinder_67fb8b5 1.4

scRNA analysis- a collection of current tools, file used to build it is copied into /

  • version: 1.3.8
Latest release: over 2 years ago - 273 downloads - 1,392 dependencies
prismcmap/qc EPS005

  • version: 1.3.5
Latest release: 4 months ago - 739 downloads - 245 dependencies
stefanucciluca/tregopathies latest

  • version: 1.3.8
Latest release: about 2 years ago - 86 downloads - 488 dependencies
prismcmap/lfc 0.0.1

  • version: 1.3.5
Latest release: over 2 years ago - 780 downloads - 245 dependencies
etycksen/sc_deluxe 0.7

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

  • version: 1.3.8
Latest release: 6 months ago - 2,648 downloads - 757 dependencies
qdidiscoveryservices/seurat_tidyverse latest

  • version: 1.3.3
Latest release: over 4 years ago - 13 downloads - 435 dependencies
gesiscss/binder-r2d-g5b5b759-krisrs1128-2dmbtransfer-5fdemo-dffea6 8280cdc5b2cd4819736eeb5d37151f18aa521d51

  • version: 1.3.8
Latest release: over 1 year ago - 142 downloads - 1,437 dependencies
etretiakov/workbench-session-complete jammy-2024.09.19-custom-12.9

  • version: 1.3.8
Latest release: about 1 year ago - 1,187 downloads - 6,961 dependencies
gesiscss/binder-r2d-g5b5b759-ropensci-2druodk-43df84 94345cd4f4d31472feca85aa4bff7761cd359341

  • version: 1.3.5
Latest release: 11 months ago - 206 downloads - 1,957 dependencies
nakamichi/r-latex geospatial-4.2.2

  • version: 1.3.7
Latest release: almost 3 years ago - 33 downloads - 381 dependencies
prismcmap/batch_correction EPS005

  • version: 1.3.5
Latest release: 4 months ago - 756 downloads - 245 dependencies
micedre/onyxia-r-datascience r4.4.2-2025.05.05

  • version: 1.3.8, 1.3.12
Latest release: 6 months ago - 783 downloads - 2,211 dependencies
prismcmap/compound_summary APS005

  • version: 1.3.5
Latest release: 2 months ago - 675 downloads - 627 dependencies
mshriver01/share_task_archr latest

  • version: 1.3.8
Latest release: over 2 years ago - 85 downloads - 1,364 dependencies
bixbeta/czid v6

updated to https://github.com/chanzuckerberg/czid-cli/releases/tag/v6.0.0

  • version: 1.3.3
Latest release: over 1 year ago - 51 downloads - 421 dependencies
nefsc/rstudio 4.2.2

  • version: 1.3.7
Latest release: almost 3 years ago - 17 downloads - 630 dependencies
mknudson/share_task_cell_annotation mei-cell-annotation

  • version: 1.3.8
Latest release: about 2 years ago - 147 downloads - 316 dependencies
thomasfaria/dt-rn-chapitre1 latest

  • version: 1.3.7
Latest release: almost 3 years ago - 23 downloads - 1,704 dependencies
stormgod/deepmaps-cpu latest

  • version: 1.3.8
Latest release: over 2 years ago - 96 downloads - 1,710 dependencies
weishwu/planet 12052022

  • version: 1.3.7
Latest release: almost 3 years ago - 32 downloads - 341 dependencies
apollodorus/polyglot v1

  • version: 1.3.7
Latest release: almost 3 years ago - 65 downloads - 428 dependencies
nfancy/scflow 0.7.4

  • version: 1.3.8
Latest release: over 1 year ago - 300 downloads - 778 dependencies
inseefrlab/formation-r-lissage-spatial latest

  • version: 1.3.7
Latest release: about 3 years ago - 59 downloads - 1,456 dependencies
maitner/example latest

  • version: 1.3.7
Latest release: almost 3 years ago - 19 downloads - 418 dependencies
qdidiscoveryservices/pseudobulk 2.0.2

  • version: 1.3.3
Latest release: about 1 year ago - 589 downloads - 1,112 dependencies
ucbscf/stat20-course-materials latest

  • version: 1.3.7
Latest release: over 2 years ago - 69 downloads - 375 dependencies
pecan/depends 4.0.2

Image that contains all the required external packages needed for PEcAn.

  • version: 1.3.8
Latest release: almost 5 years ago - 85,775 downloads - 1,274 dependencies
ramanmagar/ufc-app latest

First App

  • version: 1.3.7
Latest release: almost 3 years ago - 92 downloads - 339 dependencies
cblefari/onyxia-rstudio r4.4.2-2025.05.19

  • version: 1.3.8
Latest release: 6 months ago - 2,962 downloads - 1,607 dependencies
bixbeta/pavian v1

  • version: 1.3.3
Latest release: almost 3 years ago - 14 downloads - 388 dependencies
zwcdocker/seurat latest

  • version: 1.3.6
Latest release: almost 3 years ago - 20 downloads - 655 dependencies
aliese/wwl_demand_tracker 2.1

  • version: 1.3.8
Latest release: over 2 years ago - 84 downloads - 1,546 dependencies
inseefrlab/onyxia-r-datascience r4.4.3-2025.09.01

  • version: 1.3.12
Latest release: 2 months ago - 13,315 downloads - 1,215 dependencies
yosuketanigawa/rstudio_yt latest

  • version: 1.3.8
Latest release: over 2 years ago - 207 downloads - 2,089 dependencies
espirado/slurm.worker 23.02

  • version: 1.3.8
Latest release: over 2 years ago - 62 downloads - 1,095 dependencies
elynrfw/gerald-test latest

  • version: 1.3.7
Latest release: almost 3 years ago - 36 downloads - 349 dependencies
chiajungl/scrna 4.4.0-4.4

  • version: 1.3.8
Latest release: over 1 year ago - 94 downloads - 1,312 dependencies
compbiocore/dscov_sct 20221201

  • version: 1.3.7
Latest release: almost 3 years ago - 44 downloads - 1,031 dependencies
gesiscss/binder-r2d-g5b5b759-karthik-2dbinder-2dtest-649047 db6941e4903ed4e97d65e6c67b0d43c624659327

  • version: 1.2.0
Latest release: over 2 years ago - 70 downloads - 1,119 dependencies
gesiscss/binder-r2d-g5b5b759-bitbacchus-2dlandscapemetrics-534342 419e1888d2a366045ff96c1118759fb246b0924d

  • version: 1.2.0
Latest release: over 2 years ago - 21 downloads - 1,119 dependencies
daltoncp/rstudio_celegansbulksequencing 4.2_3

  • version: 1.3.8
Latest release: over 2 years ago - 60 downloads - 1,562 dependencies
gesiscss/binder-r2d-g5b5b759-carstenlange-2daiblogpackages-f5acfa d6dd0cf9d7cad6225db275435decb7f6976862c1

  • version: 1.3.5
Latest release: over 2 years ago - 54 downloads - 1,972 dependencies
jingxin/terrascpipe v0

  • version: 1.3.8
Latest release: almost 3 years ago - 141 downloads - 2,467 dependencies
lupgmbh/snuc 200624

Smart Nature Use Case Tegel - Vegetationsmonitoring mit Fernerkundungsdaten

  • version: 1.3.8
Latest release: over 1 year ago - 328 downloads - 1,105 dependencies
dsouzd04/himc_zellkonverter 1.6.5

  • version: 1.3.7
Latest release: almost 3 years ago - 86 downloads - 953 dependencies
viascientific/rstudio-app-isee 1.0

  • version: 1.3.3
Latest release: over 2 years ago - 82 downloads - 897 dependencies
inseefrlab/esa-nowcasting-2023 v10.0.0

  • version: 1.3.8
Latest release: over 2 years ago - 233 downloads - 2,402 dependencies
dantingz/seurat 1.0.2

  • version: 1.0.0
Latest release: about 2 years ago - 97 downloads - 915 dependencies
winuthayanon/rstudio 4.3.0

  • version: 1.3.8
Latest release: over 2 years ago - 153 downloads - 2,687 dependencies
abelhj/rstudio 4.2.3

  • version: 1.3.8
Latest release: over 2 years ago - 53 downloads - 800 dependencies
sludock/sludock18august latest

  • version: 1.3.4
Latest release: about 3 years ago - 18 downloads - 1,078 dependencies
gesiscss/binder-ds421-2ddocker-2dtutorial-30bf5e 821258d172cef1b4b0dcf56940cba3d0b934b1ad

  • version: 1.2.0
Latest release: almost 6 years ago - 13 downloads - 1,118 dependencies
gesiscss/binder-r2d-g5b5b759-seabbs-2dcste-2dforecasting-2dworkshop-00735f b5563d9a628f5eba1c6f436724b03e6392c32f59

  • version: 1.3.8
Latest release: over 1 year ago - 177 downloads - 1,442 dependencies
lglforfun/rstudio_dev 4.3.2

  • version: 1.3.8
Latest release: almost 2 years ago - 239 downloads - 1,462 dependencies
shl198/rna_ppl latest

  • version: 1.3.5
Latest release: over 2 years ago - 24 downloads - 2,099 dependencies
btrspg/vscode-dkd-env latest

  • version: 1.3.8
Latest release: over 2 years ago - 59 downloads - 1,182 dependencies
bicore/gcs_10x_rnaseq_qc 4.2.0

  • version: 1.3.5
Latest release: almost 3 years ago - 35 downloads - 1,454 dependencies
schmitzdj/r_studio_azure latest

  • version: 1.3.8
Latest release: over 2 years ago - 63 downloads - 1,109 dependencies
imegusu/rstudio_rnaseq_all3 latest

RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq

  • version: 1.3.8
Latest release: over 2 years ago - 33 downloads - 1,568 dependencies