Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
Package Usage : cran : BiocIO
Explore the latest package usage data for BiocIO in the cran ecosystem, including detailed information on package dependencies and their usage.
Total dependents: 238
Total downloads: 246,132
More details on packages.ecosyste.ms - JSON
broadinstitute/terra-jupyter-aou 8bf6b13
- version: 1.8.0
nfcore/methylseq dev
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel.
- version: 1.2.0
mirekphd/ml-cpu-r40-rs-cust 20230912
- version: 1.10.0
biocontainers/isee-galaxy v3.13_cv1.0.0
- version: 1.3.0
cimendes/splicing-pipelines-nf 3.1.ubuntu
- version: 1.2.0
koki/sctensor-experiments 20220208
- version: 1.4.0
qdidiscoveryservices/scrna_downstream 1.1
- version: 1.2.0
koki/biocdev 20230818
- version: 1.11.0
anand7899/rmarkdown latest
- version: 1.8.0
hoonbiolab/hmftools v1.1
- version: 1.2.0
jafoltz/scclassify latest
- version: 1.4.0
crukmi/mesa main
- version: 1.7.1
testalabgh/downstream signac-1.4.0
- version: 1.4.0
mlepetit/ranalysis 3.3.4
- version: 1.2.0
dolphinnext/ont_variant_calling 1.0
- version: 1.8.0
tipsarin/rstudio 4.1.3viraltrack
- version: 1.4.0
lorentzb/gene8940_r 1.0
- version: 1.8.0
doejgi/trinityrnaseq-wdl 2.11.0b
- version: 1.8.0
khoulaha/jabba v1.0.0
- version: 1.8.0
koki/tensor-projects-machima 20220827
- version: 1.6.0
hoonbiolab/pepatac v1.1
- version: 1.2.0
crukmi/mesa_dependencies latest
- version: 1.8.0
koki/urchin_workflow_seurat 20230616
- version: 1.8.0
dmiller15/minfi 4.2.0
- version: 1.6.0
bryanfisk/capybara latest
- version: 1.4.0
mattjmeier/r-odaf-hc-prod latest
- version: 1.8.0
koki/velocytor 20221015
- version: 1.6.0
jpsmith5/peppro latest
- version: 1.8.0
alanocallaghan/high-dimensional-stats-r latest
- version: 1.9.1
sagnikbanerjee15/ngpint 1.0.0
- version: 1.5.0
haileyzhang/lfq-analyst v1.2.6
A docker container for LFQ-Analyst
- version: 1.8.0
mlepetit/rnormalisation 1.0
- version: 1.2.0
sheddn/bioinformatics-tools latest
- version: 1.4.0
weishwu/systempiper 12022022
- version: 1.6.0
etretiakov/workbench-session-complete jammy-2023.10.24-custom-12.5
- version: 1.10.0
biodancer/nasap_performance latest
write later
- version: 1.4.0
fgualdr/envrperm latest
- version: 1.8.0
mbaardwijk/hmftools latest
- version: 1.4.0
h836472/cs_mainimage test
- version: 1.4.0
haileyzhang/fragpipe-analyst v0.23
A Docker container of Fragpipe-Analyst
- version: 1.8.0
yiluxiangbei/pumpkin-genomealign-notebook 1.0
- version: 1.4.0
gongx030/ensemblemerge 2.1.24
Docker image for running ensemblemerge package.
- version: 1.8.0
yiluxiangbei/pumpkin-gene-genomealign 20220216
- version: 1.4.0
gnwanne/decontx latest
- version: 1.8.0
skoyamamd/scoreinvhap latest
- version: 1.4.0
lemoniada/test pipeline
- version: 1.8.0
hoonbiolab/chromothripsis v1.0
- version: 1.4.0
kisudsoe/r-base latest
- version: 1.8.0
haileyzhang/phospho-analyst v1.0.1
- version: 1.8.0
mtorresm55/r_env_4_1_0 v1.0
- version: 1.4.0
mattjmeier/r-odaf-hc latest
Under Development. Containerized version of the R-ODAF Health Canada Pipeline.
- version: 1.8.0
crpeters/r-methylkit 4.2.1
- version: 1.8.0
bioconductor/ismb.osca 124cbc0
- version: 1.10.0
jpsmith5/rpipe 0.3.1
- version: 1.8.0
alexthiery/archr 3.1
- version: 1.4.0
abelean/seurat_azimuth 5b
- version: 1.4.0
markataylor/r_yufree v1.0.0
- version: 1.8.0
sparktx/gviz 1.40.1
- version: 1.6.0
chriswyatt/genespaces latest
- version: 1.4.0
edkang0925/diffutr latest
- version: 1.8.0
bakeronit/rstudio_hpc_cancer 0.1.3
rocker-rstudio with some R packages installed in cancer genomic analysis
- version: 1.8.0, 1.10.0
mattjmeier/r-odaf-hc-base latest
- version: 1.8.0
philipp02/pathway v1
- version: 1.9.0
stormgod/deepmaps-cpu latest
- version: 1.8.0
sameetmehta/docker_report_apptainer devel
- version: 1.10.0
am5747/methylation latest
- version: 1.8.0
weishwu/planet 12052022
- version: 1.6.0
apollodorus/polyglot v1
- version: 1.8.0
gpato/lacen-app 2.4.0
- version: 1.4.0
hoonbiolab/hmftools_purple v3.7.2
- version: 1.8.0
hoonbiolab/hmftools_snv v3.2.2
- version: 1.8.0
elynrfw/gerald-test latest
- version: 1.8.0
almahmoud/terra-jupyter bioc
- version: 1.6.0
kdgosik/main-gitpod latest
- version: 1.8.0
jieliu4wustl/wustl v0.1_20230907
- version: 1.8.0
aokad/recount3 1.8.0
- version: 1.8.0
weishwu/chipseeker 1.34.1
- version: 1.8.0
dsouzd04/himc_zellkonverter 1.6.5
- version: 1.6.0
duclare123/vizcnv_dev latest
Visualization tool for WGS analysis
- version: 1.8.0
jwcarlson/genespace latest
- version: 1.10.0
fauzul/fuseq_wes_hg19 1.0
- version: 1.4.0
alkoenig08/harmonyseurat latest
Docker container built on satijalab/seurat with Broad Institute's "Harmony" package installed.
- version: 1.8.0
neutronstar21/rocker_tidyverse_2023_05_05_v1 latest
- version: 1.10.0
apollodorus/genentech-jp v1
- version: 1.4.0
mhettich0years/r-images v1.1.2
- version: 1.8.0
shashankti/bioc_docker v1
- version: 1.9.2
zwcdocker/seurat latest
- version: 1.2.0
compbiocore/dscov_sct 20221201
- version: 1.8.0
kxk302/g4hunter 1.0.0
- version: 1.8.0
hoonbiolab/hmftools_linx v1.23.1
- version: 1.8.0
yosuketanigawa/rocker-geospatial-seurat latest
Docker image of Seurat installed on R Studio
- version: 1.6.0
daltoncp/rstudio_celegansbulksequencing 4.2_3
- version: 1.8.0
compbiocore/lee_isg_erv 20230306
- version: 1.8.0
yinxiu/variantalker v2.0
NextFlow pipeline to functionally annotate DNA variants in VCF files
- version: 1.8.0, 1.10.0