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An open API service providing dependency metadata for docker images.

Package Usage : cran : edgeR

Explore the latest package usage data for edgeR in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 268
Total downloads: 1,749,654

More details on packages.ecosyste.ms - JSON

nfcore/rnaseq 1.4.2

Docker Image for nf-core/rnaseq project.

  • version: 3.30.0
Latest release: almost 6 years ago - 660,804 downloads - 208 dependencies
veupathdb/rserve 8.2.2

  • version: 3.40.2
Latest release: 5 months ago - 627,414 downloads - 550 dependencies
broadinstitute/terra-jupyter-aou 2.1.13

  • version: 3.40.0
Latest release: over 2 years ago - 96,569 downloads - 4,112 dependencies
nfcore/smrnaseq 1.1.0

A Docker container for the nf-core/smrnaseq pipeline.

  • version: 3.26.5
Latest release: about 4 years ago - 52,167 downloads - 320 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 3.42.4
Latest release: almost 2 years ago - 28,089 downloads - 10,962 dependencies
dhspence/docker-genomic-analysis 122121

From Chris Miller's example

  • version: 3.28.1
Latest release: over 3 years ago - 19,986 downloads - 1,294 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 3.38.1
Latest release: about 3 years ago - 17,819 downloads - 11,684 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 3.38.1
Latest release: about 3 years ago - 9,814 downloads - 12,259 dependencies
kbase/kbase sdkbase.latest

  • version: 3.4.2
Latest release: over 7 years ago - 4,321 downloads - 2,934 dependencies
nfcore/nanoseq 1.1.0

Nanopore demultiplexing, QC and alignment pipeline

  • version: 3.32.0
Latest release: over 4 years ago - 9,754 downloads - 340 dependencies
mirekphd/ml-cpu-r35-rs 20190201

  • version: 3.24.3
Latest release: over 6 years ago - 1,359 downloads - 9,716 dependencies
prismcmap/depmap_versions v0.1.0

  • version: 3.32.1
Latest release: over 3 years ago - 2,833 downloads - 633 dependencies
dhspence/docker-homer latest

docker with chip-seq tool homer

  • version: 3.22.5
Latest release: over 6 years ago - 723 downloads - 606 dependencies
nfcore/exoseq dev

A docker container for the ExoSeq pipeline

  • version: 3.22.5
Latest release: over 6 years ago - 1,192 downloads - 616 dependencies
nfcore/lncpipe dev

A Docker image for nf-core/lncpipe

  • version: 3.22.5
Latest release: over 6 years ago - 1,196 downloads - 413 dependencies
kbase/kbase_base latest

KBase Base Image containing Core services and runtime

  • version: 3.4.2
Latest release: over 8 years ago - 644 downloads - 3,106 dependencies
kbase/sdkbase latest

  • version: 3.4.2
Latest release: over 8 years ago - 497 downloads - 2,934 dependencies
prismcmap/drc-module v0.0.1

  • version: 3.32.1
Latest release: over 2 years ago - 597 downloads - 647 dependencies
dhspence/docker-sicer latest

  • version: 3.22.3
Latest release: over 6 years ago - 789 downloads - 1,147 dependencies
qdidiscoveryservices/limma-voom 4.2.0

  • version: 3.38.0
Latest release: about 3 years ago - 1,640 downloads - 1,382 dependencies
qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 3.36.0
Latest release: over 1 year ago - 3,981 downloads - 1,464 dependencies
prismcmap/norm-module v0.0.1

  • version: 3.32.1
Latest release: over 3 years ago - 430 downloads - 633 dependencies
dhspence/docker-basestation latest

  • version: 3.22.3
Latest release: over 6 years ago - 347 downloads - 1,132 dependencies
qdidiscoveryservices/py3_cellranger 6.1.2

  • version: 3.30.0
Latest release: over 3 years ago - 343 downloads - 1,375 dependencies
mirekphd/ml-cpu-r35-jnb devel_2b2752c

  • version: 3.22.2
Latest release: about 7 years ago - 364 downloads - 9,222 dependencies
koki/pagoda latest

  • version: 3.18.1
Latest release: almost 8 years ago - 270 downloads - 390 dependencies
tercen/runtime-flowsuite 3.15-4

  • version: 3.38.4
Latest release: almost 3 years ago - 455 downloads - 1,641 dependencies
qdidiscoveryservices/scrna_downstream 1.1

  • version: 3.34.1
Latest release: over 3 years ago - 426 downloads - 1,716 dependencies
qdidiscoveryservices/bam_to_10x_counts latest

  • version: 3.36.0
Latest release: over 2 years ago - 198 downloads - 962 dependencies
chgyi/bio 3.5.1

  • version: 3.22.3
Latest release: almost 7 years ago - 531 downloads - 1,077 dependencies
biocontainers/bioconductor-edger v3.14.0dfsg-1-deb_cv1

  • version: 3.14.0
Latest release: about 7 years ago - 162 downloads - 390 dependencies
chgyi/metaware_rna_denovo latest

  • version: 3.24.3
Latest release: over 6 years ago - 237 downloads - 2,095 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 3.22.3
Latest release: about 7 years ago - 357 downloads - 9,302 dependencies
dhspence/docker-manta 1.5.0

  • version: 3.22.3
Latest release: over 6 years ago - 180 downloads - 1,191 dependencies
dhspence/docker-hiccompare latest

  • version: 3.28.1
Latest release: about 4 years ago - 126 downloads - 1,271 dependencies
atttilacs/dsp_geomxtools latest

  • version: 3.36.0
Latest release: almost 3 years ago - 114 downloads - 871 dependencies
atttilacs/seurat_big latest

  • version: 3.36.0
Latest release: over 2 years ago - 495 downloads - 997 dependencies
mirekphd/ml-cpu-r35-rdp 20180918

  • version: 3.22.3
Latest release: almost 7 years ago - 230 downloads - 9,486 dependencies
jafoltz/scclassify latest

  • version: 3.36.0
Latest release: over 2 years ago - 94 downloads - 1,079 dependencies
crukmi/mesa main

  • version: 3.39.6
Latest release: almost 3 years ago - 162 downloads - 1,326 dependencies
testalabgh/downstream signac-1.4.0

  • version: 3.36.0
Latest release: over 2 years ago - 485 downloads - 3,517 dependencies
atttilacs/dsp_giotto latest

  • version: 3.36.0
Latest release: almost 3 years ago - 101 downloads - 1,154 dependencies
mlepetit/ranalysis 3.3.4

  • version: 3.34.1
Latest release: over 2 years ago - 221 downloads - 2,131 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 3.40.0
Latest release: over 2 years ago - 149 downloads - 382 dependencies
koki/tensor-project-parasite 20211013

  • version: 3.34.1
Latest release: almost 4 years ago - 100 downloads - 206 dependencies
gesiscss/binder-ngs-2ddocs-2d2020-2dggg-2d298-2dfirst-2dday-2drnaseq-c342e4 dca58a4e2661655c1469b51f54f6baafdd836726

  • version: 3.28.0
Latest release: over 5 years ago - 126 downloads - 1,498 dependencies
tercen/flowsom_operator 1.6.2

  • version: 3.38.0
Latest release: over 1 year ago - 245 downloads - 1,563 dependencies
gesiscss/binder-statomics-2dsga2019-4a5361 1c74d6b57a18a85f98e3380f8356a4a6b5413520

  • version: 3.28.0
Latest release: over 5 years ago - 62 downloads - 1,313 dependencies
dhspence/docker-vep 93

  • version: 3.22.3
Latest release: over 6 years ago - 73 downloads - 1,191 dependencies
mirekphd/ml-cpu-r35-guac devel_6f33d1e

  • version: 3.22.2
Latest release: about 7 years ago - 136 downloads - 8,551 dependencies
qdidiscoveryservices/bam_to_10x_counts_pandoc latest

  • version: 3.36.0
Latest release: over 2 years ago - 67 downloads - 964 dependencies
doejgi/trinityrnaseq-wdl 2.15.1

  • version: 3.28.1, 3.40.0
Latest release: over 2 years ago - 798 downloads - 980 dependencies
chriswyatt/perl_r_e1071 latest

  • version: 3.36.0
Latest release: over 3 years ago - 73 downloads - 268 dependencies
tercen/debarcoding_cytof_operator 0.3.2

  • version: 3.38.4
Latest release: over 1 year ago - 168 downloads - 1,659 dependencies
koki/tensor-projects-machima 20220827

  • version: 3.38.4
Latest release: almost 3 years ago - 120 downloads - 1,441 dependencies
mirekphd/ml-gpu-r35-cuda90 devel_00b4e38

  • version: 3.22.2
Latest release: about 7 years ago - 76 downloads - 9,405 dependencies
qdidiscoveryservices/batch_correction latest

  • version: 3.30.3
Latest release: over 4 years ago - 41 downloads - 790 dependencies
crukmi/mesa_dependencies latest

  • version: 3.40.2
Latest release: over 2 years ago - 76 downloads - 1,393 dependencies
trust1/rbox v1

Methylation array work toolbox

  • version: 3.32.1
Latest release: about 2 years ago - 59 downloads - 912 dependencies
koki/urchin_workflow_seurat 20250213

  • version: 3.40.2
Latest release: 6 months ago - 123 downloads - 1,471 dependencies
koki/tensor-projects-parasite 20220819

  • version: 3.38.4
Latest release: almost 3 years ago - 71 downloads - 1,281 dependencies
mirekphd/ml-cpu-r36-rs 20200131

  • version: 3.28.0
Latest release: over 5 years ago - 68 downloads - 10,669 dependencies
mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

  • version: 3.22.2
Latest release: about 7 years ago - 40 downloads - 9,414 dependencies
qdidiscoveryservices/glimma 4.2.0

  • version: 3.38.0
Latest release: about 3 years ago - 74 downloads - 1,371 dependencies
mattjmeier/r-odaf-hc-prod latest

  • version: 3.40.0
Latest release: over 2 years ago - 50 downloads - 897 dependencies
recetox/xmsanalyzer 2.0.6.1-recetox1

  • version: 3.30.3
Latest release: over 4 years ago - 50 downloads - 588 dependencies
koki/velocytor 20221015

  • version: 3.38.4
Latest release: almost 3 years ago - 58 downloads - 1,452 dependencies
luisas/rdeanalysis latest

  • version: 3.28.1
Latest release: over 5 years ago - 47 downloads - 508 dependencies
bjornson/st_viewer v1

  • version: 3.20.9
Latest release: over 6 years ago - 36 downloads - 892 dependencies
porchard/decontx 20230104

  • version: 3.40.1
Latest release: over 2 years ago - 39 downloads - 830 dependencies
tercen/diffcyt_operator 0.4.4

  • version: 3.38.0
Latest release: over 1 year ago - 110 downloads - 1,563 dependencies
tercen/compensate_cytof_operator 0.0.7

  • version: 3.38.4
Latest release: over 2 years ago - 61 downloads - 1,643 dependencies
tercen/automated_gating_operator 1.0.3

  • version: 3.38.4
Latest release: over 1 year ago - 152 downloads - 655 dependencies
mlepetit/rnormalisation 1.0.0

  • version: 3.34.1
Latest release: over 2 years ago - 61 downloads - 2,142 dependencies
koki/bindsc 20220609

  • version: 3.38.1
Latest release: about 3 years ago - 43 downloads - 2,060 dependencies
luisas/rde latest

  • version: 3.28.1
Latest release: over 4 years ago - 43 downloads - 549 dependencies
sheddn/bioinformatics-tools latest

  • version: 3.36.0
Latest release: over 2 years ago - 54 downloads - 2,518 dependencies
atttilacs/omardspcode latest

  • version: 3.36.0
Latest release: almost 3 years ago - 18 downloads - 672 dependencies
etretiakov/workbench-session-complete jammy-2024.09.19-custom-12.9

  • version: 3.42.4
Latest release: 10 months ago - 861 downloads - 6,961 dependencies
qdidiscoveryservices/flowr 1.0

  • version: 3.38.1
Latest release: about 3 years ago - 62 downloads - 1,476 dependencies
koki/urchin_workflow_r 20250116

  • version: 3.38.1
Latest release: 6 months ago - 70 downloads - 1,253 dependencies
luisas/r_sc latest

  • version: 3.28.1
Latest release: over 4 years ago - 20 downloads - 536 dependencies
shl198/sc_ppl 202306

  • version: 3.42.2
Latest release: about 2 years ago - 63 downloads - 2,005 dependencies
prismcmap/batch-correct-module v0.0.1

  • version: 3.32.1
Latest release: over 2 years ago - 56 downloads - 633 dependencies
yiluxiangbei/pumpkin-genomealign-notebook 1.0

  • version: 3.36.0
Latest release: over 3 years ago - 25 downloads - 2,028 dependencies
gongx030/ensemblemerge 2.1.24

Docker image for running ensemblemerge package.

  • version: 3.40.0
Latest release: over 2 years ago - 38 downloads - 546 dependencies
yiluxiangbei/pumpkin-gene-genomealign 20220216

  • version: 3.36.0
Latest release: over 3 years ago - 29 downloads - 2,116 dependencies
gnwanne/decontx latest

  • version: 3.40.1
Latest release: over 2 years ago - 49 downloads - 938 dependencies
entsupml/r-with-libraries latest

  • version: 3.40.2
Latest release: over 2 years ago - 84 downloads - 992 dependencies
qdidiscoveryservices/ubuntu-1604-pipeline_docker-r_and_bioconductor latest

  • version: 3.28.1
Latest release: almost 5 years ago - 13 downloads - 1,153 dependencies
tercen/flowsom_mst_operator 0.0.3

  • version: 3.38.0
Latest release: about 3 years ago - 38 downloads - 1,547 dependencies
chgyi/trinity 2.8.4

  • version: 3.20.8
Latest release: over 6 years ago - 19 downloads - 795 dependencies
qdidiscoveryservices/sc_pip_r_and_py latest

  • version: 3.32.0
Latest release: over 4 years ago - 14 downloads - 1,097 dependencies
prismcmap/biomarker-module v0.1.1

  • version: 3.32.1
Latest release: about 3 years ago - 183,444 downloads - 633 dependencies
tercen/t_test_operator 1.1.4

  • version: 3.38.0
Latest release: over 1 year ago - 113 downloads - 1,547 dependencies
tercen/compare_means_operator 0.1.9

  • version: 3.38.0
Latest release: about 2 years ago - 170 downloads - 559 dependencies