Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : annotate

Explore the latest package usage data for annotate in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 296
Total downloads: 1,290,623

More details on packages.ecosyste.ms - JSON

veupathdb/rserve 7

  • version: 1.76.0
Latest release: 12 months ago - 624,940 downloads - 550 dependencies
broadinstitute/terra-jupyter-aou 8bf6b13

  • version: 1.76.0
Latest release: almost 2 years ago - 92,816 downloads - 4,112 dependencies
ccdlstaging/dr_affymetrix f30409aceba66e19235b21b4ca8899e318e02e30

  • version: 1.56.2
Latest release: about 1 year ago - 92,270 downloads - 1,220 dependencies
nfcore/atacseq latest

A Docker container for the nf-core/atacseq pipeline.

  • version: 1.64.0
Latest release: over 2 years ago - 54,429 downloads - 352 dependencies
nfcore/chipseq dev

A docker image for nf-core/chipseq

  • version: 1.66.0
Latest release: over 3 years ago - 50,176 downloads - 309 dependencies
dhspence/docker-basespace_chromoseq latest

  • version: 1.62.0
Latest release: over 5 years ago - 38,314 downloads - 559 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 1.78.0
Latest release: about 1 year ago - 21,613 downloads - 10,962 dependencies
dhspence/docker-genomic-analysis 122121

From Chris Miller's example

  • version: 1.64.0
Latest release: almost 3 years ago - 19,678 downloads - 1,294 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 1.70.0
Latest release: over 2 years ago - 13,673 downloads - 11,684 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 1.70.0
Latest release: over 2 years ago - 6,685 downloads - 12,259 dependencies
nfcore/circrna dev

Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.

  • version: 1.64.0
Latest release: about 2 years ago - 1,202 downloads - 654 dependencies
nfcore/slamseq dev

A docker image for nf-core/slamseq

  • version: 1.60.1
Latest release: over 3 years ago - 25,614 downloads - 354 dependencies
nfcore/nanoseq dev

Nanopore demultiplexing, QC and alignment pipeline

  • version: 1.68.0
Latest release: almost 4 years ago - 9,677 downloads - 340 dependencies
mirekphd/ml-cpu-r35-rs 20190201

  • version: 1.60.0
Latest release: almost 6 years ago - 762 downloads - 9,716 dependencies
prismcmap/depmap_versions dd55695d58fb

  • version: 1.68.0
Latest release: 12 months ago - 1,452 downloads - 633 dependencies
dhspence/docker-homer latest

docker with chip-seq tool homer

  • version: 1.58.0
Latest release: almost 6 years ago - 702 downloads - 606 dependencies
nfcore/exoseq dev

A docker container for the ExoSeq pipeline

  • version: 1.58.0
Latest release: about 6 years ago - 1,158 downloads - 616 dependencies
nfcore/lncpipe dev

A Docker image for nf-core/lncpipe

  • version: 1.58.0
Latest release: almost 6 years ago - 1,141 downloads - 413 dependencies
prismcmap/drc-module robust_DRC

  • version: 1.68.0
Latest release: over 1 year ago - 539 downloads - 647 dependencies
veitveit/vsclust release-1.2.1

For more details, see https://bitbucket.org/veitveit/vsclust

  • version: 1.76.0
Latest release: over 1 year ago - 445 downloads - 1,148 dependencies
dhspence/docker-sicer latest

  • version: 1.58.0
Latest release: almost 6 years ago - 765 downloads - 1,147 dependencies
qdidiscoveryservices/limma-voom 4.2.0

  • version: 1.74.0
Latest release: over 2 years ago - 1,002 downloads - 1,382 dependencies
prismcmap/norm-module 26be7aa8ab48

  • version: 1.68.0
Latest release: almost 2 years ago - 380 downloads - 633 dependencies
dhspence/docker-basestation latest

  • version: 1.58.0
Latest release: over 5 years ago - 308 downloads - 1,132 dependencies
qdidiscoveryservices/py3_cellranger 6.1.2

  • version: 1.66.0
Latest release: about 3 years ago - 302 downloads - 1,375 dependencies
mirekphd/ml-cpu-r35-jnb devel_2b2752c

  • version: 1.58.0
Latest release: over 6 years ago - 271 downloads - 9,222 dependencies
dhspence/docker-ichor latest

  • version: 1.58.0
Latest release: over 6 years ago - 236 downloads - 961 dependencies
biocontainers/bioconductor-annotate v1.52.1dfsg-1-deb_cv1

  • version: 1.52.1
Latest release: over 6 years ago - 520 downloads - 426 dependencies
biocontainers/bioconductor-geneplotter v1.52.0-2-deb_cv1

  • version: 1.52.1
Latest release: over 6 years ago - 517 downloads - 430 dependencies
koki/sctensor-experiments 20220208

  • version: 1.72.0
Latest release: almost 3 years ago - 206 downloads - 2,071 dependencies
evolbioinfo/deseq2 v1.28.1

  • version: 1.66.0
Latest release: about 4 years ago - 206 downloads - 452 dependencies
qdidiscoveryservices/scrna_downstream 1.1

  • version: 1.70.0
Latest release: almost 3 years ago - 354 downloads - 1,716 dependencies
koki/biocdev 20230818

  • version: 1.79.0
Latest release: over 1 year ago - 201 downloads - 1,504 dependencies
anand7899/rmarkdown latest

  • version: 1.76.0
Latest release: about 2 years ago - 262 downloads - 766 dependencies
prismcmap/sushi develop

  • version: 1.68.0
Latest release: 10 months ago - 221 downloads - 723 dependencies
chgyi/bio 3.5.1

  • version: 1.58.0
Latest release: about 6 years ago - 158 downloads - 1,077 dependencies
canaantt/notitia-ocpu latest

This is part of zager/notitia.

  • version: 1.56.1
Latest release: almost 7 years ago - 153 downloads - 633 dependencies
biocontainers/bioconductor-deseq2 v1.14.1-1-deb_cv1

  • version: 1.52.1
Latest release: over 6 years ago - 155 downloads - 523 dependencies
biocontainers/bioconductor-genefilter v1.56.0-1-deb_cv1

  • version: 1.52.1
Latest release: over 6 years ago - 133 downloads - 428 dependencies
chgyi/metaware_rna_denovo latest

  • version: 1.60.0
Latest release: over 5 years ago - 132 downloads - 2,095 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 1.58.0
Latest release: over 6 years ago - 134 downloads - 9,302 dependencies
dhspence/docker-manta 1.5.0

  • version: 1.58.0
Latest release: almost 6 years ago - 126 downloads - 1,191 dependencies
koki/sctensor-workshop sha-fa8c4cf

  • version: 1.71.0
Latest release: about 3 years ago - 111 downloads - 2,087 dependencies
atttilacs/dsp_geomxtools latest

  • version: 1.72.0
Latest release: about 2 years ago - 114 downloads - 871 dependencies
atttilacs/seurat_big latest

  • version: 1.72.0
Latest release: almost 2 years ago - 495 downloads - 997 dependencies
mirekphd/ml-cpu-r35-rdp 20180918

  • version: 1.58.0
Latest release: about 6 years ago - 93 downloads - 9,486 dependencies
jafoltz/scclassify latest

  • version: 1.72.0
Latest release: almost 2 years ago - 90 downloads - 1,079 dependencies
testalabgh/downstream signac-1.4.0

  • version: 1.72.0
Latest release: over 1 year ago - 485 downloads - 3,517 dependencies
mlepetit/ranalysis 3.3.4

  • version: 1.70.0
Latest release: about 2 years ago - 79 downloads - 2,131 dependencies
hdsu/etbii2023 latest

  • version: 1.72.0
Latest release: almost 2 years ago - 73 downloads - 358 dependencies
koki/rstudio_mesh latest

  • version: 1.73.0
Latest release: about 3 years ago - 67 downloads - 1,389 dependencies
ccdlstaging/dr_common_tests 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 1.56.2
Latest release: 12 months ago - 710 downloads - 784 dependencies
qdidiscoveryservices/ssgsea 1.0

  • version: 1.76.0
Latest release: almost 2 years ago - 65 downloads - 665 dependencies
millerh1/ste v1.0

  • version: 1.76.0
Latest release: almost 2 years ago - 9,929 downloads - 844 dependencies
gesiscss/binder-statomics-2dsga2019-4a5361 1c74d6b57a18a85f98e3380f8356a4a6b5413520

  • version: 1.64.0
Latest release: almost 5 years ago - 55 downloads - 1,313 dependencies
lorentzb/gene8940_r 1.0

  • version: 1.76.0
Latest release: almost 2 years ago - 55 downloads - 926 dependencies
dhspence/docker-vep 93

  • version: 1.58.0
Latest release: over 5 years ago - 53 downloads - 1,191 dependencies
mirekphd/ml-cpu-r35-guac devel_6f33d1e

  • version: 1.58.0
Latest release: over 6 years ago - 54 downloads - 8,551 dependencies
doejgi/trinityrnaseq-wdl 2.11.0b

  • version: 1.76.0, 1.64.0
Latest release: over 1 year ago - 331 downloads - 980 dependencies
ccdlstaging/dr_downloader latest

  • version: 1.56.2
Latest release: over 6 years ago - 47 downloads - 663 dependencies
koki/tensor-projects-machima 20220827

  • version: 1.74.0
Latest release: about 2 years ago - 49 downloads - 1,441 dependencies
mirekphd/ml-gpu-r35-cuda90 devel_00b4e38

  • version: 1.58.0
Latest release: over 6 years ago - 42 downloads - 9,405 dependencies
qdidiscoveryservices/batch_correction latest

  • version: 1.66.0
Latest release: almost 4 years ago - 40 downloads - 790 dependencies
trust1/rbox v1

Methylation array work toolbox

  • version: 1.68.0
Latest release: over 1 year ago - 48 downloads - 912 dependencies
koki/urchin_workflow_seurat 20230616

  • version: 1.76.0
Latest release: over 1 year ago - 63 downloads - 1,471 dependencies
koki/tensor-projects-parasite 20220819

  • version: 1.74.0
Latest release: over 2 years ago - 43 downloads - 1,281 dependencies
dmiller15/minfi 4.2.0

  • version: 1.74.0
Latest release: over 2 years ago - 35 downloads - 1,415 dependencies
mirekphd/ml-cpu-r36-rs 20200131

  • version: 1.64.0
Latest release: almost 5 years ago - 34 downloads - 10,669 dependencies
bryanfisk/capybara latest

  • version: 1.72.0
Latest release: almost 2 years ago - 35 downloads - 1,067 dependencies
mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

  • version: 1.58.0
Latest release: over 6 years ago - 29 downloads - 9,414 dependencies
qdidiscoveryservices/glimma 4.2.0

  • version: 1.74.0
Latest release: over 2 years ago - 69 downloads - 1,371 dependencies
chriswyatt/svm1071deseq2limma latest

  • version: 1.72.0
Latest release: almost 3 years ago - 29 downloads - 327 dependencies
mattjmeier/r-odaf-hc-prod latest

  • version: 1.76.0
Latest release: almost 2 years ago - 35 downloads - 897 dependencies
recetox/xmsanalyzer 2.0.6.1-recetox1

  • version: 1.66.0
Latest release: about 4 years ago - 31 downloads - 588 dependencies
alanocallaghan/high-dimensional-stats-r latest

  • version: 1.77.0
Latest release: almost 2 years ago - 91 downloads - 1,601 dependencies
luisas/rdeanalysis latest

  • version: 1.64.0
Latest release: over 4 years ago - 29 downloads - 508 dependencies
sagnikbanerjee15/ngpint 1.0.0

  • version: 1.73.0
Latest release: about 3 years ago - 28 downloads - 2,335 dependencies
qdidiscoveryservices/ssgsea-py3 latest

  • version: 1.64.0
Latest release: over 3 years ago - 28 downloads - 596 dependencies
haileyzhang/lfq-analyst v1.2.6

A docker container for LFQ-Analyst

  • version: 1.76.0
Latest release: 12 months ago - 89 downloads - 1,496 dependencies
prangannath/rna_seq latest

Container for EvolOMICS RNA_Seq pipeline

  • version: 1.72.0
Latest release: almost 2 years ago - 26 downloads - 1,382 dependencies
mlepetit/rnormalisation 1.0

  • version: 1.70.0
Latest release: about 2 years ago - 33 downloads - 2,142 dependencies
luisas/rde latest

  • version: 1.64.0
Latest release: almost 4 years ago - 20 downloads - 549 dependencies
sheddn/bioinformatics-tools latest

  • version: 1.72.0
Latest release: almost 2 years ago - 41 downloads - 2,518 dependencies
weishwu/systempiper 12022022

  • version: 1.74.0
Latest release: almost 2 years ago - 19 downloads - 1,383 dependencies
etretiakov/workbench-session-complete jammy-2023.10.24-custom-12.5

  • version: 1.78.0
Latest release: about 1 year ago - 58 downloads - 6,961 dependencies
qdidiscoveryservices/flowr 1.0

  • version: 1.74.0
Latest release: over 2 years ago - 17 downloads - 1,476 dependencies
koki/urchin_workflow_r 20220531

  • version: 1.74.0
Latest release: over 2 years ago - 17 downloads - 1,253 dependencies
luisas/r_sc latest

  • version: 1.64.0
Latest release: about 4 years ago - 18 downloads - 536 dependencies
shl198/sc_ppl 202306

  • version: 1.78.0
Latest release: over 1 year ago - 52 downloads - 2,005 dependencies
prismcmap/batch-correct-module v0.0.1

  • version: 1.68.0
Latest release: almost 2 years ago - 21 downloads - 633 dependencies
froeuhouais/r_image latest

R image with DESeq2

  • version: 1.76.0
Latest release: almost 2 years ago - 18 downloads - 424 dependencies
haileyzhang/fragpipe-analyst v0.23

A Docker container of Fragpipe-Analyst

  • version: 1.76.0
Latest release: over 1 year ago - 34 downloads - 1,511 dependencies
yiluxiangbei/pumpkin-genomealign-notebook 1.0

  • version: 1.72.0
Latest release: almost 3 years ago - 13 downloads - 2,028 dependencies