mirekphd/ml-cpu-r40-rs-cust 20230912

nfcore/airrflowreport dev

veitveit/vsclust release-1.2.1

For more details, see https://bitbucket.org/veitveit/vsclust

bactopia/tools-pirate 1.7.1

koki/sctensor-experiments 20220208

koki/biocdev 20230818

austinhpatton123/cogeqc-1.2.0_r-4.2.2 latest

koki/sctensor-workshop sha-fa8c4cf

crukmi/mesa main

testalabgh/downstream signac-1.4.0

scgfacility/rstudio-course22 v0.11

image used to run the course 2022

hdsu/etbii2023 latest

crukmi/mesa_dependencies latest

veitveit/coexpresso latest

mattjmeier/r-odaf-hc-prod latest

sheddn/bioinformatics-tools latest

etretiakov/workbench-session-complete jammy-2023.10.24-custom-12.5

kisudsoe/r-base latest

viascientific/rstudio-app 1.0

albertea/numbat_light 02

mattjmeier/r-odaf-hc latest

Under Development. Containerized version of the R-ODAF Health Canada Pipeline.

crpeters/r-methylkit 4.2.1

denglab/vpfkit_base latest

bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

mattjmeier/r-odaf-hc-base latest

stormgod/deepmaps-cpu latest

tamaraperteghella/r4_hormonit latest

gmillot/immcantation_v1.1 gitlab_v10.0

weishwu/chipseeker 1.34.1

gmillot/r_v4.1.2_ig_clustering_v1.1 gitlab_v9.7

https://gitlab.pasteur.fr/gmillot/dockerfiles/-/tree/v9.7

andyvs/testimage 3.0

viascientific/deseq2-docker 2.0

13883956158/shinyproxy-r 4.2.2

payne6861/clutserprofiler v1.0.0

compbiocore/dscov_sct 20221201

compbiocore/lee_isg_erv 20230306

jenfisher7/rstudio_sbae latest

shl198/rna_ppl latest

payne6861/stereonote_non_conda_clusterprofiler_enrichplot v1.0.1

stereonote_non_conda_clusterprofiler_enrichplot

firriver/crvs latest

mfsentma/rna latest

mercury/nf_qc_scrna v2

gmillot/r_v4.1.2_ig_clustering_v1.2 gitlab_v9.8

https://gitlab.pasteur.fr/gmillot/dockerfiles/-/tree/v9.8

danhumassmed/debrowser 1.0.1

Software for Bioinformatics pipelines DEBrowser

compbiocore/jupyterhub-docker-images-jh_image 20230524

weishwu/diffbind 3.6.5

wlc27/dcanr v1

tamaraperteghella/r4_gencode latest

brianyee/cropseq-essentials 1.0.0

cgwyx/easymicrobiomer latest

The best practice for microbiome analysis using R

cjchen/gxuclass 1.0

tjhackmann/fermentationexplorer latest

preethiilumina/diffbind 1.5

fixed genome name

louisk92/spapros_scpnmf v1.0

cbgr/cager261 1.4

Container for the CAGEr tool version 2.6.1.

bianca7/clusterprofiler latest

kuangda/pc12 latest

omicsclass/genome-comparison v1.0

比较基因组分析镜像

cmccornack/crmsc latest

btrspg/genekitr latest

omicschef/rnaseqchef v1.0.9

RNAseqChef, an RNA-seq data controller highlighting gene expression features

sornnujah/sk-bactopia-nullarbor-report alpha1

mesti90/ecoli_hgt_all_in 1.1

sridnona/r4.2.0 v1

lroser/databricksbio latest

tariship/dev_sync_directories latest

nciccbr/ccbr_r_4.3.0 v1

sviatsidorov/granie_analysis 0.1

Analysis of gliogenesis in a mouse model using GRaNIE

biocorecrg/microbiomeprofile 0.4

etycksen/sc_deluxe 0.2

gyusikhwang/tgs v1

omicschef/epigenomechef v1.1.3

nfancy/scflow dev

wyangwu/r4.1.2 latest

bioxfu/xseurat2 latest

chunjiesamliu/scmocha latest

denglab/vpfkit latest

jingxin/terrascpipe v0

qdidiscoveryservices/diffbind latest

jackiezhuqi/bio-rstudio latest

dcarrillouu/plot_genomes 0.2

btrspg/vscode-dkd-env latest

imegusu/rstudio_rnaseq_all3 latest

RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq

ycli1995/bioinfo_dev 1.0.1

omicsclass/pan-genome v1.0

etretiakov/rocker-session latest

mfsentma/atacseq latest

mziemann/enrichment_recipe latest

Example highly reproducible bioinformatics workflow including transcriptome and pathway analysis.

bianca7/mompreprocess latest

avi156/rocker-binder-upd 4.2.2

fgualdr/env_gsea latest

ericsalomaki/rnaseq_r4_2 latest

omicsclass/metagenomics latest

btrspg/r-env latest