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Package Usage : cran : pbapply

Explore the latest package usage data for pbapply in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 314
Total downloads: 884,998
Showing first 100 dependents

More details on packages.ecosyste.ms - JSON

qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 1.7-0
Latest release: about 2 years ago - 4,404 downloads - 1,464 dependencies
btrspg/r-env cache

  • version: 1.7-2
Latest release: 10 months ago - 342 downloads - 2,231 dependencies
ocdr/ds-apps 1.0.43

  • version: 1.7-2
Latest release: about 2 years ago - 3,932 downloads - 3,778 dependencies
ijapesigan/r2u 2025-10-31-01182782

  • version: 1.7-2
Latest release: 3 months ago - 12,982 downloads - 1,325 dependencies
koki/urchin_workflow_seurat 20251014

  • version: 1.7-0
Latest release: 3 months ago - 367 downloads - 1,471 dependencies
vnmd/afni_22.1.14 latest

  • version: 1.5-0
Latest release: over 3 years ago - 112 downloads - 2,186 dependencies
lukasjirinovak/paqvalidation latest

Materials necessary to fully reproduce results of the validation of Perth Alexithymia Questionnaire

  • version: 1.5-0
Latest release: about 3 years ago - 130 downloads - 747 dependencies
tercen/opencyto_operator 0.2.0

  • version: 1.5-0
Latest release: almost 4 years ago - 71 downloads - 1,514 dependencies
vanessa/seurat latest

  • version: 1.3-4
Latest release: over 7 years ago - 58 downloads - 475 dependencies
mlepetit/ranalysis 3.3.4

  • version: 1.5-0
Latest release: about 3 years ago - 221 downloads - 2,131 dependencies
globusgenomics/picrust 1.0

  • version: 1.7-0
Latest release: almost 3 years ago - 130 downloads - 595 dependencies
gnwanne/atac latest

  • version: 1.6-0
Latest release: about 3 years ago - 35 downloads - 688 dependencies
yosuketanigawa/rocker-geospatial-seurat latest

Docker image of Seurat installed on R Studio

  • version: 1.7-0
Latest release: almost 3 years ago - 149 downloads - 512 dependencies
tariship/dev_sync_directories latest

  • version: 1.7-0
Latest release: over 2 years ago - 396 downloads - 421 dependencies
loukaszagkoslcpuk/lcphaomicscoloc latest

  • version: 1.7-2
Latest release: about 2 years ago - 26 downloads - 896 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 1.6-0
Latest release: about 3 years ago - 195 downloads - 382 dependencies
cheyne0328/rstudio zxy

  • version: 1.7-0
Latest release: over 2 years ago - 24 downloads - 775 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 1.3-4
Latest release: over 7 years ago - 443 downloads - 9,302 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 1.7-0
Latest release: over 2 years ago - 155 downloads - 679 dependencies
nathanprovin/cellcom 1.2.2

  • version: 1.7-2
Latest release: over 2 years ago - 189 downloads - 596 dependencies
tercen/automated_gating_operator 1.0.3

  • version: 1.5-0
Latest release: almost 2 years ago - 207 downloads - 655 dependencies
tercen/tracksom_operator 0.1.5

  • version: 1.5-0
Latest release: almost 3 years ago - 144 downloads - 760 dependencies
raghukirannavipoint/aldex2 mar23

  • version: 1.7-0
Latest release: almost 3 years ago - 121 downloads - 1,548 dependencies
intiquan/iqdesktop latest

  • version: 1.5-0
Latest release: over 2 years ago - 376 downloads - 3,511 dependencies
ijapesigan/rocker 2025-11-21-09230020

  • version: 1.7-2
Latest release: 2 months ago - 26,993 downloads - 1,251 dependencies
matzieb/shiny-4.0.3-seurat4-spatial latest

  • version: 1.7-2
Latest release: over 2 years ago - 26 downloads - 1,061 dependencies
rgregstacey/seurat_image 2.1

  • version: 1.7-0
Latest release: almost 3 years ago - 113 downloads - 547 dependencies
payne6861/stereonote_non_conda_scmerge_seurat_harmony_batchelor_cca v1.0.0

stereonote_non_conda_scmerge_seurat_harmony_batchelor_cca

  • version: 1.6-0
Latest release: about 3 years ago - 81 downloads - 1,943 dependencies
qdidiscoveryservices/seurat_cell_annotation latest

  • version: 1.6-0
Latest release: about 3 years ago - 75 downloads - 699 dependencies
mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

  • version: 1.3-4
Latest release: over 7 years ago - 43 downloads - 9,414 dependencies
tipsarin/kubeflow-rstudio latest

rstudio for kubeflow

  • version: 1.5-0
Latest release: almost 4 years ago - 74 downloads - 1,312 dependencies
koki/velocytor 20221015

  • version: 1.5-0
Latest release: over 3 years ago - 62 downloads - 1,452 dependencies
ghhenry/curio-seeker-pipeline latest

  • version: 1.6-0
Latest release: about 3 years ago - 40 downloads - 926 dependencies
brianyee/cropseq-essentials 1.0.0

  • version: 1.7-0
Latest release: almost 3 years ago - 60 downloads - 2,274 dependencies
sagnikbanerjee15/ngpint 1.0.0

  • version: 1.5-0
Latest release: about 4 years ago - 45 downloads - 2,335 dependencies
tercen/compare_means_operator 0.1.9

  • version: 1.5-0
Latest release: over 2 years ago - 196 downloads - 559 dependencies
koki/bindsc 20220609

  • version: 1.5-0
Latest release: over 3 years ago - 52 downloads - 2,060 dependencies
uabbds/zebrafish_telencephalon_atlas_app 1.0.0

  • version: 1.7-2
Latest release: over 2 years ago - 330 downloads - 1,409 dependencies
jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

  • version: 1.4-3
Latest release: over 2 years ago - 303 downloads - 1,173 dependencies
mshriver01/share_task_seurat latest

  • version: 1.7-2
Latest release: over 2 years ago - 394 downloads - 1,637 dependencies
socioconfused/docker_r latest

  • version: 1.7-0
Latest release: almost 3 years ago - 164 downloads - 999 dependencies
tercen/diffcyt_operator 0.4.4

  • version: 1.5-0
Latest release: almost 2 years ago - 135 downloads - 1,563 dependencies
mfsentma/atacseq latest

  • version: 1.7-0
Latest release: almost 3 years ago - 34 downloads - 852 dependencies
andrewrrelmore/genepi_vscode test

  • version: 1.7-2
Latest release: over 2 years ago - 48 downloads - 1,188 dependencies
hoonbiolab/sequenza v1.1

  • version: 1.4-3
Latest release: over 4 years ago - 36 downloads - 801 dependencies
cgwyx/easymicrobiomer latest

The best practice for microbiome analysis using R

  • version: 1.7-0
Latest release: over 2 years ago - 47 downloads - 1,604 dependencies
ijapesigan/rarch 2024-12-29-00501041

  • version: 1.7-2
Latest release: about 1 year ago - 3,003 downloads - 897 dependencies
alexthiery/archr 3.1

  • version: 1.7-2
Latest release: over 2 years ago - 238 downloads - 819 dependencies
avi156/rocker-binder-upd 4.2.2

  • version: 1.7-0
Latest release: almost 3 years ago - 22 downloads - 2,271 dependencies
adrianrh/swomse shiny_live

  • version: 1.7-2
Latest release: over 2 years ago - 308 downloads - 569 dependencies
nilesh0404/st_visualizer m1_0.1.2

  • version: 1.7-2
Latest release: over 2 years ago - 18 downloads - 1,422 dependencies
addis/patavi-gemtc-worker-base latest

  • version: 1.4-3
Latest release: over 4 years ago - 164 downloads - 622 dependencies
ikanx101/r-custom latest

R Studio Server versi ikanx101.com

  • version: 1.5-0
Latest release: almost 3 years ago - 1,902 downloads - 1,729 dependencies
alexthiery/schelper seurat-schelper-0.3.5

  • version: 1.5-0
Latest release: over 2 years ago - 389 downloads - 1,494 dependencies
mlepetit/rnormalisation 1.0.0

  • version: 1.5-0
Latest release: about 3 years ago - 94 downloads - 2,142 dependencies
chiajungl/scrna-extra 4.4.0-4.4

  • version: 1.7-0
Latest release: over 1 year ago - 920 downloads - 1,350 dependencies
dmiller15/sequenza 3.0.0

  • version: 1.4-1
Latest release: about 3 years ago - 139 downloads - 448 dependencies
luisas/rde latest

  • version: 1.4-3
Latest release: about 5 years ago - 66 downloads - 549 dependencies
uvarc/rstudio tam5xe

  • version: 1.7-2
Latest release: over 2 years ago - 37 downloads - 1,062 dependencies
tercen/flowcut_operator 0.1.8

  • version: 1.5-0
Latest release: almost 2 years ago - 95 downloads - 578 dependencies
tercen/normalyzer_operator 0.1.4

  • version: 1.5-0
Latest release: almost 2 years ago - 101 downloads - 590 dependencies
natalie23gill/seurat-4-3_soupx-1-6-1_doubletfinder_67fb8b5 1.4

scRNA analysis- a collection of current tools, file used to build it is copied into /

  • version: 1.7-0
Latest release: over 2 years ago - 273 downloads - 1,392 dependencies
nciccbr/ccbr_fraser_1.10.2 latest

  • version: 1.4-3
Latest release: almost 3 years ago - 77 downloads - 293 dependencies
jafoltz/sc_python 8

  • version: 1.6-0
Latest release: almost 3 years ago - 122 downloads - 438 dependencies
daltoncp/rstudio_celeganssinglecell 4.2_12

  • version: 1.7-2
Latest release: over 2 years ago - 293 downloads - 529 dependencies
lishuangshuang3/dnbc4dev 2.0.3

  • version: 1.5-0
Latest release: over 2 years ago - 124 downloads - 1,043 dependencies
luisas/r_sc.simg latest

  • version: 1.4-3
Latest release: about 5 years ago - 21 downloads - 260 dependencies
dpraveen511/spot spot_ec2

  • version: 1.7-2
Latest release: over 2 years ago - 220 downloads - 287 dependencies
anlitiks/ra_takeda latest

  • version: 1.7-0
Latest release: about 3 years ago - 154 downloads - 390 dependencies
stefanucciluca/tregopathies latest

  • version: 1.7-2
Latest release: over 2 years ago - 91 downloads - 488 dependencies
harshaldeokar/us_medgenome_v12 latest

  • version: 1.4-2
Latest release: over 2 years ago - 66 downloads - 2,611 dependencies
etycksen/sc_deluxe 0.7

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

  • version: 1.5-0
Latest release: 9 months ago - 2,648 downloads - 757 dependencies
qdidiscoveryservices/seurat_tidyverse latest

  • version: 1.4-3
Latest release: almost 5 years ago - 13 downloads - 435 dependencies
nikhil166/cellxgene_vip_docker v2.4

  • version: 1.7-2
Latest release: over 2 years ago - 392 downloads - 2,101 dependencies
kaizhang/scatac-bench 0.2.1

  • version: 1.7-0
Latest release: over 2 years ago - 440 downloads - 588 dependencies
gyusikhwang/tgs v1

  • version: 1.5-0
Latest release: almost 3 years ago - 58 downloads - 1,095 dependencies
pennsive/mstools 4.2-amd64

  • version: 1.7-0
Latest release: almost 3 years ago - 74 downloads - 303 dependencies
etretiakov/workbench-session-complete jammy-2024.09.19-custom-12.9

  • version: 1.7-2
Latest release: over 1 year ago - 1,193 downloads - 6,961 dependencies
granatumx/gbox-cellid-sctype 1.0.2

  • version: 1.7-0
Latest release: over 2 years ago - 91 downloads - 201 dependencies
rsoren/hmtbook_rstudio latest

  • version: 1.6-0
Latest release: about 3 years ago - 53 downloads - 260 dependencies
qdidiscoveryservices/pipeline_docker-r_and_bioconductor latest

  • version: 1.4-2
Latest release: over 5 years ago - 10 downloads - 431 dependencies
tercen/normalise_cytof_operator 0.2.3

  • version: 1.5-0
Latest release: almost 2 years ago - 53 downloads - 655 dependencies
mshriver01/share_task_archr latest

  • version: 1.7-2
Latest release: over 2 years ago - 91 downloads - 1,364 dependencies
bixbeta/czid v6

updated to https://github.com/chanzuckerberg/czid-cli/releases/tag/v6.0.0

  • version: 1.4-3
Latest release: over 1 year ago - 68 downloads - 421 dependencies
evafastpf/commot 0.1

  • version: 1.7-2
Latest release: over 2 years ago - 62 downloads - 1,877 dependencies
mknudson/share_task_cell_annotation mei-cell-annotation

  • version: 1.7-2
Latest release: over 2 years ago - 158 downloads - 316 dependencies
vgonzenbach/rstudio 4.2

  • version: 1.6-0
Latest release: about 3 years ago - 94 downloads - 528 dependencies
tercen/flowsom_mst_shiny_operator 0.1.9

  • version: 1.5-0
Latest release: almost 4 years ago - 44 downloads - 734 dependencies
brianyee/r-essentials 2.0.0

  • version: 1.7-0
Latest release: 6 months ago - 121 downloads - 1,682 dependencies
mikesiwenwu/eversus_benchmarking v7_s3test

  • version: 1.7-2
Latest release: over 2 years ago - 158 downloads - 579 dependencies
mpaltsai/biotextquest_top2vec 27122022

  • version: 1.5-0
Latest release: about 3 years ago - 212 downloads - 476 dependencies
brusconi/seurat new

  • version: 1.7-2
Latest release: over 1 year ago - 146 downloads - 536 dependencies
stormgod/deepmaps-cpu latest

  • version: 1.7-0
Latest release: almost 3 years ago - 114 downloads - 1,710 dependencies
lizzyr/pseudo_ko 1.0.3

  • version: 1.7-2
Latest release: over 2 years ago - 40 downloads - 379 dependencies
sameetmehta/docker_report_apptainer devel

  • version: 1.7-0
Latest release: over 2 years ago - 26 downloads - 352 dependencies
biomehub/encodestatsbase 0.0.6

Basic docker image used as a base for EncodeStats.

  • version: 1.7-2
Latest release: almost 2 years ago - 807 downloads - 853 dependencies
tercen/tercen_studio_flowsuite 0.0.1

  • version: 1.5-0
Latest release: almost 4 years ago - 142 downloads - 574 dependencies
apollodorus/polyglot v1

  • version: 1.6-0
Latest release: about 3 years ago - 77 downloads - 428 dependencies
ucigenomics/cellchatnotebook 2.1.2

  • version: 1.6-0
Latest release: over 1 year ago - 36 downloads - 1,564 dependencies