Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : brio

Explore the latest package usage data for brio in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 1,420
Total downloads: 85,046,881

More details on packages.ecosyste.ms - JSON

jupyter/datascience-notebook x86_64-python-3.11.6

Data Science Jupyter Notebook Python Stack from https://github.com/jupyter/docker-stacks

  • version: 1.1.3
Latest release: over 1 year ago - 34,322,165 downloads - 2,728 dependencies
broadinstitute/gatk 4.6.1.0

Official release repository for GATK versions 4.x

  • version: 1.1.2
Latest release: 3 months ago - 38,914,712 downloads - 912 dependencies
rocker/tidyverse 4.4.1

Version-stable build of R, rstudio, and R packages

  • version: 1.1.4, 1.1.3
Latest release: 6 months ago - 25,141,853 downloads - 858 dependencies
apache/zeppelin 0.11.2

Apache Zeppelin

  • version: 1.1.2
Latest release: 7 months ago - 3,777,498 downloads - 1,492 dependencies
jupyter/r-notebook x86_64-python-3.11.6

R Jupyter Notebook Stack from https://github.com/jupyter/docker-stacks

  • version: 1.1.3
Latest release: over 1 year ago - 2,394,534 downloads - 1,718 dependencies
rocker/verse 4.4.2

Adds tex & related publishing packages to version-locked tidyverse image

  • version: 1.1.4, 1.1.3
Latest release: 3 months ago - 1,556,518 downloads - 1,104 dependencies
rocker/geospatial 4.4.2

Docker-based Geospatial toolkit for R, built on versioned Rocker images

  • version: 1.1.3, 1.1.4
Latest release: 3 months ago - 835,840 downloads - 1,336 dependencies
bioconductor/bioconductor_docker RELEASE_3_20

Bioconductor Docker Images

  • version: 1.1.3, 1.1.4
Latest release: 3 months ago - 1,450,871 downloads - 1,397 dependencies
rocker/shiny-verse 4.4.2

Rocker Shiny image + Tidyverse R packages. Uses version-stable images.

  • version: 1.1.3, 1.1.4
Latest release: 3 months ago - 1,258,802 downloads - 950 dependencies
veupathdb/rserve 8.1.4

  • version: 1.1.3
Latest release: 4 months ago - 626,889 downloads - 550 dependencies
ccdlstaging/dr_downloaders 1.45.8

  • version: 1.1.3
Latest release: over 1 year ago - 127,834 downloads - 1,028 dependencies
broadinstitute/gtex_eqtl V10

GTEx Consortium: eQTL pipeline based on FastQTL

  • version: 1.1.3
Latest release: almost 3 years ago - 103,038 downloads - 846 dependencies
ashish1981/shinyapp-sarb latest

  • version: 1.1.1
Latest release: almost 4 years ago - 91,399 downloads - 1,042 dependencies
broadinstitute/terra-jupyter-aou 2.1.13

  • version: 1.1.3
Latest release: about 2 years ago - 95,633 downloads - 4,112 dependencies
ccdlstaging/dr_affymetrix 1.45.8

  • version: 1.1.3
Latest release: over 1 year ago - 94,460 downloads - 1,220 dependencies
rocker/binder 4.4.1

Adds binder to rocker/tidyverse, providing JupyterHub access on rocker containers

  • version: 1.1.4, 1.1.3
Latest release: 8 months ago - 107,789 downloads - 2,239 dependencies
broadinstitute/gatk-nightly 2024-08-17-4.6.0.0-10-g9f2fbb553-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

  • version: 1.1.2
Latest release: 5 months ago - 186,109 downloads - 912 dependencies
rocker/ml 4.4.1

Docker images with R + GPU support for machine learning libraries

  • version: 1.1.4, 1.1.3
Latest release: 8 months ago - 74,198 downloads - 939 dependencies
ccdlstaging/dr_salmon 1.45.8

  • version: 1.1.3
Latest release: over 1 year ago - 61,084 downloads - 916 dependencies
nfcore/atacseq 1.2.2

A Docker container for the nf-core/atacseq pipeline.

  • version: 1.1.2
Latest release: over 2 years ago - 54,822 downloads - 352 dependencies
nfcore/chipseq 1.2.2

A docker image for nf-core/chipseq

  • version: 1.1.2
Latest release: almost 4 years ago - 52,400 downloads - 309 dependencies
ashish1981/s390x-r-appln-z 3.6.3

  • version: 1.1.1
Latest release: almost 4 years ago - 44,688 downloads - 1,475 dependencies
nfcore/eager 2.5.2

A Docker image for the nf-core/eager pipeline.

  • version: 1.1.3
Latest release: 7 months ago - 46,224 downloads - 738 dependencies
rocker/ml-verse 4.4.1

  • version: 1.1.3, 1.1.4
Latest release: 8 months ago - 53,386 downloads - 1,414 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 1.1.3
Latest release: over 1 year ago - 25,819 downloads - 10,962 dependencies
fazenda/rsmd 64c1b962-4-14

  • version: 1.1.3
Latest release: over 2 years ago - 20,360 downloads - 180 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 1.1.3
Latest release: over 2 years ago - 14,641 downloads - 11,684 dependencies
vanallenlab/sv-pipeline rlc_aou_evidencetable_fix

  • version: 1.1.3
Latest release: 10 months ago - 26,275 downloads - 1,231 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 1.1.3
Latest release: over 2 years ago - 6,916 downloads - 12,259 dependencies
ashish1981/s390x-r-shiny latest

  • version: 1.1.1
Latest release: almost 4 years ago - 6,043 downloads - 1,474 dependencies
gesiscss/binder-rubydata-2dbinder-af0da2 b77e1d22eafca6c2ba3a22a8c4ea723b24f7c07e

  • version: 1.1.2
Latest release: over 3 years ago - 5,347 downloads - 2,109 dependencies
hylleraas/singleuser 53

  • version: 1.1.3
Latest release: about 1 year ago - 11,917 downloads - 2,614 dependencies
biocontainers/imputeme vv1.0.7_cv1

  • version: 1.1.2
Latest release: about 3 years ago - 3,948 downloads - 1,734 dependencies
biocontainers/isee-galaxy v3.13_cv1.0.0

  • version: 1.1.2
Latest release: over 3 years ago - 3,671 downloads - 1,218 dependencies
qdidiscoveryservices/ms_pipeline latest

  • version: 1.1.0
Latest release: about 4 years ago - 3,042 downloads - 1,044 dependencies
ashish1981/s390x-clefos-shiny latest

  • version: 1.1.1
Latest release: almost 4 years ago - 2,996 downloads - 1,467 dependencies
patroonorg/patroondeps latest

  • version: 1.1.3
Latest release: almost 2 years ago - 3,003 downloads - 1,677 dependencies
bgruening/docker-jupyter-notebook latest

Jupyter running in a docker container. This image can be used to integrate Jupyter into Galaxy

  • version: 1.1.1
Latest release: over 3 years ago - 2,874 downloads - 1,920 dependencies
alligatorcompany/acs-exasol 1.0.5

exasol docker image with additional checks

  • version: 1.1.3
Latest release: over 3 years ago - 2,092 downloads - 2,085 dependencies
databrewllc/odk-form-extraction a0ce218

  • version: 1.1.3
Latest release: 9 months ago - 66,109 downloads - 747 dependencies
araalinetworks/devproxy 0.9.91

  • version: 1.1.3
Latest release: almost 5 years ago - 2,361 downloads - 2,686 dependencies
rapporteket/dev weekly

  • version: 1.1.3
Latest release: about 1 year ago - 2,423 downloads - 1,346 dependencies
broadinstitute/fungal_gatk4 gatk4.5.0.0

  • version: 1.1.3
Latest release: 9 months ago - 17,549 downloads - 942 dependencies
tercen/dartrusttidy 1.0.10

  • version: 1.1.1
Latest release: almost 4 years ago - 1,579 downloads - 700 dependencies
gesiscss/binder-palmoreck-2ddockerfiles-2dfor-2dbinder-f98a72 e6751152f3669d7fa6b0892ed229918a75b153df

  • version: 1.1.2
Latest release: over 3 years ago - 1,260 downloads - 2,152 dependencies
dceoy/r-tidyverse latest

R with tidyverse

  • version: 1.1.3
Latest release: about 2 years ago - 1,321 downloads - 615 dependencies
dragonflyscience/dragonverse-18.04 latest

  • version: 1.1.2
Latest release: over 2 years ago - 1,573 downloads - 1,440 dependencies
nfcore/smartseq2 dev

A docker container for the nf-core/smartseq2 pipeline.

  • version: 1.1.2
Latest release: almost 4 years ago - 1,753 downloads - 257 dependencies
afcai2c/r-studio-eda 20230130il5

R Studio with Exploritory Data Analysis AI/ML packages installed

  • version: 1.1.3
Latest release: almost 2 years ago - 1,959 downloads - 702 dependencies
nfcore/airrflowreport dev

  • version: 1.1.3
Latest release: almost 2 years ago - 1,010 downloads - 409 dependencies
dragonflyscience/sharknado 2024-06-10

  • version: 1.1.3
Latest release: 8 months ago - 1,807 downloads - 2,516 dependencies
recetox/retip 0.5.4-recetox4

Retention Time prediction for metabolomics

  • version: 1.1.1
Latest release: almost 4 years ago - 1,184 downloads - 524 dependencies
nfcore/circrna dev

Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.

  • version: 0.3.17
Latest release: over 2 years ago - 1,210 downloads - 654 dependencies
biocontainers/phylotools v0.2.4_cv1

  • version: 1.1.3
Latest release: almost 3 years ago - 896 downloads - 520 dependencies
afcai2c/python-r-ai latest

Image with Python and R packages

  • version: 1.1.3
Latest release: over 2 years ago - 920 downloads - 851 dependencies
tercen/runtime-r40 4.0.4-6

  • version: 1.1.1
Latest release: about 2 years ago - 1,053 downloads - 639 dependencies
nfcore/sarek 2.7.2

A Docker container for the nf-core/sarek pipeline

  • version: 1.1.3
Latest release: over 2 years ago - 1,069,006 downloads - 607 dependencies
intelliseqngs/task_bam-bsqr 1.2.2

  • version: 1.1.2
Latest release: almost 2 years ago - 31,363 downloads - 1,038 dependencies
intelliseqngs/task_bam-filter-mismatch 1.4.1

  • version: 1.1.2
Latest release: almost 2 years ago - 22,135 downloads - 1,138 dependencies
prismcmap/reports v0.3.0

  • version: 1.1.3
Latest release: over 1 year ago - 19,203 downloads - 1,108 dependencies
intelliseqngs/gatk dbsnp-genotyping_grch38-no-alt-analysis-set_1.0.4-chrY-and-the-rest

  • version: 1.1.2
Latest release: almost 3 years ago - 13,417 downloads - 948 dependencies
nfcore/nanoseq 1.1.0

Nanopore demultiplexing, QC and alignment pipeline

  • version: 1.1.0
Latest release: about 4 years ago - 9,714 downloads - 340 dependencies
nfcore/scrnaseq 1.1.0

A Docker Container for the nf-core/scrnaseq pipeline.

  • version: 1.1.2
Latest release: almost 4 years ago - 7,770 downloads - 423 dependencies
intelliseqngs/task_bam-metrics-grch38-no-alt 1.0.2

  • version: 1.1.2
Latest release: almost 2 years ago - 5,139 downloads - 1,140 dependencies
databrewllc/anomaly-detection acf56fc

This repository is used for forms anomaly detection

  • version: 1.1.3
Latest release: almost 2 years ago - 4,958 downloads - 656 dependencies
nfcore/proteomicslfq 1.0.0

A Docker Container for label free quantification for proteomics data.

  • version: 1.1.3
Latest release: over 4 years ago - 5,517 downloads - 1,124 dependencies
nfcore/diaproteomics 1.2.4

A Docker container for nf-core/diaproteomics

  • version: 1.1.2
Latest release: almost 4 years ago - 7,092 downloads - 488 dependencies
intelliseqngs/task_mt-varcall-mutect2 1.1.2

  • version: 1.1.2
Latest release: almost 2 years ago - 2,905 downloads - 1,038 dependencies
intelliseqngs/task_genotype-gvcf-on-dbsnp-positions-grch38-no-alt 1.0.2-chrY-and-the-rest

  • version: 1.1.2
Latest release: almost 2 years ago - 2,475 downloads - 1,040 dependencies
intelliseqngs/gatk-4.2.0.0 1.0.0

  • version: 1.1.1
Latest release: almost 4 years ago - 2,317 downloads - 957 dependencies
intelliseqngs/task_vcf-concat 1.0.4

  • version: 1.1.2
Latest release: almost 2 years ago - 3,244 downloads - 1,043 dependencies
intelliseqngs/task_vcf-anno-cosmic 2.1.6

  • version: 1.1.2
Latest release: about 1 year ago - 2,712 downloads - 346 dependencies
intelliseqngs/task_mt-realign 1.1.2

  • version: 1.1.2
Latest release: almost 2 years ago - 2,048 downloads - 1,038 dependencies
intelliseqngs/task_bam-gatk-m2 1.1.2

  • version: 1.1.2
Latest release: almost 2 years ago - 2,129 downloads - 1,038 dependencies
intelliseqngs/task_vcf-varcall-metrics-hg38 1.1.2

  • version: 1.1.2
Latest release: almost 2 years ago - 2,063 downloads - 1,038 dependencies
intelliseqngs/gatk-4.2.0.0-grch38-no-alt 1.1.0

  • version: 1.1.1
Latest release: about 3 years ago - 1,705 downloads - 957 dependencies
prismcmap/landing v0.2.2

  • version: 1.1.3
Latest release: over 1 year ago - 1,442 downloads - 877 dependencies
intelliseqngs/task_vcf-prepare 1.0.4

  • version: 1.1.2
Latest release: 8 months ago - 1,387 downloads - 1,038 dependencies
dg520/rsimple 1.1

  • version: 1.1.3
Latest release: about 2 years ago - 779 downloads - 403 dependencies
ocdr/ds-apps 1.0.43

  • version: 1.1.3
Latest release: about 1 year ago - 3,932 downloads - 3,778 dependencies
prismcmap/depmap_versions v0.1.0

  • version: 1.1.3
Latest release: about 3 years ago - 2,190 downloads - 633 dependencies