jupyter/all-spark-notebook x86_64-spark-3.5.0

Python, Scala, R and Spark Jupyter Notebook Stack from https://github.com/jupyter/docker-stacks

jupyter/datascience-notebook x86_64-python-3.11.6

Data Science Jupyter Notebook Python Stack from https://github.com/jupyter/docker-stacks

broadinstitute/gatk 4.6.1.0

Official release repository for GATK versions 4.x

rocker/tidyverse 4.4.1

Version-stable build of R, rstudio, and R packages

apache/zeppelin 0.11.2

Apache Zeppelin

jupyter/r-notebook x86_64-python-3.11.6

R Jupyter Notebook Stack from https://github.com/jupyter/docker-stacks

rocker/verse 4.4.2

Adds tex & related publishing packages to version-locked tidyverse image

rocker/geospatial 4.4.2

Docker-based Geospatial toolkit for R, built on versioned Rocker images

rocker/shiny-verse 4.4.2

Rocker Shiny image + Tidyverse R packages. Uses version-stable images.

veupathdb/rserve 8.1.4

broadinstitute/viral-core 2.0.21

ashish1981/x86-r-z-appln latest

broadinstitute/gtex_eqtl V10

GTEx Consortium: eQTL pipeline based on FastQTL

ashish1981/shinyapp-sarb latest

broadinstitute/terra-jupyter-aou 2.1.13

rocker/binder 4.4.1

Adds binder to rocker/tidyverse, providing JupyterHub access on rocker containers

broadinstitute/gatk-nightly 2024-08-17-4.6.0.0-10-g9f2fbb553-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

rocker/ml 4.4.1

Docker images with R + GPU support for machine learning libraries

nfcore/atacseq 1.2.2

A Docker container for the nf-core/atacseq pipeline.

nfcore/chipseq 1.2.2

A docker image for nf-core/chipseq

ashish1981/s390x-r-appln-z 3.6.3

180a51c0/gh-action-buildapp latest

nfcore/mag 1.2.0

nfcore/eager 2.5.2

A Docker image for the nf-core/eager pipeline.

tabbzi/terra-dogagingproject-genomic-reports latest

Low-pass sequencing data processing for the Dog Aging Project

rocker/ml-verse 4.4.1

nfcore/rnafusion 1.2.0

A Docker image for the nf-core/rnafusion pipeline.

mirekphd/ml-cpu-r40-rs-cust 20230912

dhspence/docker-genomic-analysis 122121

From Chris Miller's example

fazenda/rsmd 64c1b962-4-14

mirekphd/ml-cpu-r36-rs-cust latest

ashish1981/zreferenceimplementation d17052022

ocdr/dkube-datascience-rs-tf-cpu-multiuser v2.6-19

vanallenlab/sv-pipeline rlc_aou_evidencetable_fix

rocker/tensorflow 3.6.1

Tensorflow & Keras libraries for machine learning (CPU version)

hzibraunschweig/sormas-rscript 3.5-5.2022.5

rocker/r-rmd latest

Rocker container for Rmarkdown packages

mirekphd/ml-cpu-r36-base latest

ashish1981/s390x-r-shiny latest

gesiscss/binder-juliasilge-2dsupervised-2dml-2dcase-2dstudies-2dcourse-1b08b0 eb13b6477d79950a9873e0966bd3aaaa0d043059

gesiscss/binder-rubydata-2dbinder-af0da2 b77e1d22eafca6c2ba3a22a8c4ea723b24f7c07e

hylleraas/singleuser 53

tabbzi/terra-dogagingproject-data-curation latest

broadinstitute/viral-assemble latest

broadinstitute/viral-phylo 2.0.21.5

biocontainers/imputeme vv1.0.7_cv1

biocontainers/isee-galaxy v3.13_cv1.0.0

qdidiscoveryservices/ms_pipeline latest

ocdr/dkube-datascience-rs-sk-cpu-multiuser v0.23.2

ocdr/dkube-datascience-rs-tf-cpu v2.0.0

ashish1981/s390x-clefos-shiny latest

ocdr/dkube-datascience-rs-pytorch-cpu-multiuser v1.5.1

patroonorg/patroondeps latest

gesiscss/binder-gesiscss-2dsmm-5fdemo-236470 dfd722278551f17b42f226ab5a196b2b4c58e298

ocdr/dkube-datascience-rs-tf-gpu-multiuser v2.6-19

ashish1981/x86-rbase-shiny-plumber d300422

gesiscss/binder-serhatcevikel-2dbdm-5f2019-e7b363 1239175be24a02ff0e1bcd30f865011dc1fca7d4

bgruening/docker-jupyter-notebook latest

Jupyter running in a docker container. This image can be used to integrate Jupyter into Galaxy

snoopycrimecop/training-notebooks master_merge_daily

A set of Python Notebooks to demonstrate how to access the images and metadata from OMERO

broadinstitute/terra-jupyter-gatk 0.0.13

nfcore/bcellmagic 1.2.0

A preliminary container for the bcellmagic pipeline

alligatorcompany/acs-exasol 1.0.5

exasol docker image with additional checks

databrewllc/odk-form-extraction a0ce218

araalinetworks/devproxy 0.9.91

dragonflyscience/niwaverse 2020-08-11

rapporteket/dev weekly

rocker/cuda-dev 3.6.1

Adds CUDA and cudnn development libraries to rocker stack

broadinstitute/fungal_gatk4 gatk4.5.0.0

tercen/dartrusttidy 1.0.10

gesiscss/binder-gesiscss-2ddata-5fscience-5fimage-117abb 49e91d93b12b6234447e34bd3a289a833841a4e8

gesiscss/binder-palmoreck-2ddockerfiles-2dfor-2dbinder-f98a72 e6751152f3669d7fa6b0892ed229918a75b153df

dceoy/r-tidyverse latest

R with tidyverse

dragonflyscience/dragonverse-18.04 latest

afcai2c/r-studio-eda 20230130il5

R Studio with Exploritory Data Analysis AI/ML packages installed

nfcore/neutronstar 1.0.0

A Docker Container for nf-core/neutronstar

kbase/metrics latest

ocdr/dkube-datascience-rs-tf-gpu v2.0.0

nfcore/airrflowreport dev

dragonflyscience/sharknado 2024-06-10

recetox/retip 0.5.4-recetox4

Retention Time prediction for metabolomics

kbase/errorlogging develop

nfcore/circrna dev

Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.

afcai2c/python-r-ai latest

Image with Python and R packages

tercen/runtime-r40 4.0.4-6

nfcore/sarek 2.7.2

A Docker container for the nf-core/sarek pipeline