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Package Usage : cran : RcppHNSW

Explore the latest package usage data for RcppHNSW in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 128
Total downloads: 122,492

More details on packages.ecosyste.ms - JSON

broadinstitute/terra-jupyter-aou 2.1.13

  • version: 0.4.1
Latest release: over 2 years ago - 96,569 downloads - 4,112 dependencies
biocontainers/isee-galaxy v3.13_cv1.0.0

  • version: 0.3.0
Latest release: almost 4 years ago - 3,681 downloads - 1,218 dependencies
ocdr/ds-apps 1.0.43

  • version: 0.5.0
Latest release: over 1 year ago - 3,932 downloads - 3,778 dependencies
qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 0.4.1
Latest release: over 1 year ago - 3,981 downloads - 1,464 dependencies
qdidiscoveryservices/py3_cellranger 6.1.2

  • version: 0.2.0
Latest release: over 3 years ago - 343 downloads - 1,375 dependencies
tercen/runtime-flowsuite 3.15-4

  • version: 0.4.1
Latest release: almost 3 years ago - 455 downloads - 1,641 dependencies
qdidiscoveryservices/scrna_downstream 1.1

  • version: 0.3.0
Latest release: over 3 years ago - 426 downloads - 1,716 dependencies
jafoltz/scclassify latest

  • version: 0.4.1
Latest release: over 2 years ago - 94 downloads - 1,079 dependencies
testalabgh/downstream signac-1.4.0

  • version: 0.4.1
Latest release: over 2 years ago - 485 downloads - 3,517 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 0.4.1
Latest release: over 2 years ago - 149 downloads - 382 dependencies
tercen/debarcoding_cytof_operator 0.3.2

  • version: 0.4.1
Latest release: over 1 year ago - 168 downloads - 1,659 dependencies
koki/tensor-projects-machima 20220827

  • version: 0.4.1
Latest release: almost 3 years ago - 120 downloads - 1,441 dependencies
mbwali/jupyterlab qiime2023

  • version: 0.4.1
Latest release: about 2 years ago - 61 downloads - 1,941 dependencies
koki/urchin_workflow_seurat 20250213

  • version: 0.4.1
Latest release: 6 months ago - 123 downloads - 1,471 dependencies
qdidiscoveryservices/seurat_cell_annotation latest

  • version: 0.4.1
Latest release: over 2 years ago - 57 downloads - 699 dependencies
koki/velocytor 20221015

  • version: 0.4.1
Latest release: almost 3 years ago - 58 downloads - 1,452 dependencies
alanocallaghan/high-dimensional-stats-r latest

  • version: 0.4.1
Latest release: over 2 years ago - 106 downloads - 1,601 dependencies
porchard/decontx 20230104

  • version: 0.4.1
Latest release: over 2 years ago - 39 downloads - 830 dependencies
uabbds/zebrafish_telencephalon_atlas_app 1.0.0

  • version: 0.4.1
Latest release: about 2 years ago - 187 downloads - 1,409 dependencies
tercen/compensate_cytof_operator 0.0.7

  • version: 0.4.1
Latest release: over 2 years ago - 61 downloads - 1,643 dependencies
tercen/automated_gating_operator 1.0.3

  • version: 0.4.1
Latest release: over 1 year ago - 152 downloads - 655 dependencies
mlepetit/rnormalisation 1.0.0

  • version: 0.4.1
Latest release: over 2 years ago - 61 downloads - 2,142 dependencies
koki/bindsc 20220609

  • version: 0.3.0
Latest release: about 3 years ago - 43 downloads - 2,060 dependencies
luisas/rde latest

  • version: 0.3.0
Latest release: over 4 years ago - 43 downloads - 549 dependencies
etretiakov/workbench-session-complete jammy-2024.09.19-custom-12.9

  • version: 0.4.1
Latest release: 10 months ago - 861 downloads - 6,961 dependencies
luisas/r_sc latest

  • version: 0.3.0
Latest release: over 4 years ago - 20 downloads - 536 dependencies
shl198/sc_ppl 202306

  • version: 0.4.1
Latest release: about 2 years ago - 63 downloads - 2,005 dependencies
gongx030/ensemblemerge 2.1.24

Docker image for running ensemblemerge package.

  • version: 0.4.1
Latest release: over 2 years ago - 38 downloads - 546 dependencies
gnwanne/decontx latest

  • version: 0.4.1
Latest release: over 2 years ago - 49 downloads - 938 dependencies
qdidiscoveryservices/ubuntu-1604-pipeline_docker-r_and_bioconductor latest

  • version: 0.2.0
Latest release: almost 5 years ago - 13 downloads - 1,153 dependencies
qdidiscoveryservices/sc_pip_r_and_py latest

  • version: 0.3.0
Latest release: over 4 years ago - 14 downloads - 1,097 dependencies
luisas/r_sc.simg latest

  • version: 0.3.0
Latest release: over 4 years ago - 18 downloads - 260 dependencies
bioconductor/ismb.osca 124cbc0

  • version: 0.4.1
Latest release: about 2 years ago - 603 downloads - 1,422 dependencies
njjtemp/scrattch-mapping 4.2.0

  • version: 0.3.0, 0.4.1
Latest release: over 2 years ago - 588 downloads - 850 dependencies
njjai/genebasis latest

  • version: 0.4.1
Latest release: about 2 years ago - 43 downloads - 789 dependencies
abelean/seurat_azimuth 5.0.1

  • version: 0.4.1
Latest release: over 1 year ago - 1,367 downloads - 1,141 dependencies
denglab/vpfkit_base latest

  • version: 0.4.1
Latest release: over 2 years ago - 24 downloads - 1,089 dependencies
tercen/normalise_cytof_operator 0.2.3

  • version: 0.4.1
Latest release: over 1 year ago - 43 downloads - 655 dependencies
stormgod/deepmaps-cpu latest

  • version: 0.4.1
Latest release: over 2 years ago - 67 downloads - 1,710 dependencies
alleninst/arrow_scrattch_hmapping_on_hpc latest

  • version: 0.3.0
Latest release: over 2 years ago - 58 downloads - 1,556 dependencies
apollodorus/polyglot v1

  • version: 0.4.1
Latest release: over 2 years ago - 54 downloads - 428 dependencies
ucigenomics/cellchatnotebook 2.1.2

  • version: 0.4.1
Latest release: 12 months ago - 30 downloads - 1,564 dependencies
crukmi/liana 0.1.9

  • version: 0.4.1
Latest release: over 2 years ago - 34 downloads - 287 dependencies
elynrfw/gerald-test latest

  • version: 0.4.1
Latest release: over 2 years ago - 29 downloads - 349 dependencies
sebimer/samba-v4-qiime2 2024.2

  • version: 0.4.1
Latest release: over 1 year ago - 117 downloads - 583 dependencies
almahmoud/terra-jupyter bioc

  • version: 0.4.1
Latest release: over 2 years ago - 62 downloads - 2,217 dependencies
felixschlesinger/assign_types v0.2

  • version: 0.4.1
Latest release: over 2 years ago - 290 downloads - 503 dependencies
ruben6um/satijalab_seurat_slingshot_muscat_harmony_glmgampoi_svglite latest

  • version: 0.3.0
Latest release: over 2 years ago - 44 downloads - 406 dependencies
emersonchao/dsc180b latest

  • version: 0.4.1
Latest release: over 2 years ago - 57 downloads - 2,266 dependencies
ethill/qiime2 latest

docker container for qiime2

  • version: 0.4.1
Latest release: over 2 years ago - 18 downloads - 1,935 dependencies
brianyee/r-essentials 1.0.0

  • version: 0.4.1
Latest release: over 2 years ago - 76 downloads - 1,682 dependencies
daltoncp/rstudio_celeganssinglecell 4.2_12

  • version: 0.4.1
Latest release: almost 2 years ago - 224 downloads - 529 dependencies
crukmi/liana_tensor 0.1.9

  • version: 0.4.1
Latest release: over 2 years ago - 26 downloads - 467 dependencies
xjezzuuuu/setinfo-unibit-jupyter latest

  • version: 0.2.0
Latest release: over 2 years ago - 18 downloads - 2,010 dependencies
compbiocore/dscov_sct 20221201

  • version: 0.4.1
Latest release: over 2 years ago - 32 downloads - 1,031 dependencies
daltoncp/rstudio_celegansbulksequencing 4.2_3

  • version: 0.4.1
Latest release: almost 2 years ago - 52 downloads - 1,562 dependencies
fabianegli/scp-recommendations-2022 1.0

  • version: 0.4.1
Latest release: over 2 years ago - 25 downloads - 1,328 dependencies
bicore/scrattch_mapping 0.51

  • version: 0.4.1, 0.3.0
Latest release: over 1 year ago - 753 downloads - 832 dependencies
dabbleofdevops/r-datascience 4.2.2

  • version: 0.4.1
Latest release: over 2 years ago - 134 downloads - 816 dependencies
crukmi/nas-app latest

  • version: 0.4.1
Latest release: over 2 years ago - 31 downloads - 701 dependencies
crukmi/liana_tensor2 0.1.9

  • version: 0.4.1
Latest release: over 2 years ago - 19 downloads - 684 dependencies
madhu99/sb6 latest

  • version: 0.4.1
Latest release: over 2 years ago - 11 downloads - 666 dependencies
ucigenomics/spatiallibd latest

  • version: 0.4.1
Latest release: over 2 years ago - 26 downloads - 2,006 dependencies
compbiocore/jupyterhub-docker-images-jh_image 20230524

  • version: 0.4.1
Latest release: about 2 years ago - 101 downloads - 3,115 dependencies
wlc27/dcanr v1

  • version: 0.4.1
Latest release: over 2 years ago - 63 downloads - 1,681 dependencies
winuthayanon/seurat 4.3.0

  • version: 0.4.1
Latest release: about 2 years ago - 266 downloads - 2,660 dependencies
cgwyx/easymicrobiomer latest

The best practice for microbiome analysis using R

  • version: 0.4.1
Latest release: about 2 years ago - 44 downloads - 1,604 dependencies
nilesh0404/st_visualizer m1_0.1.2

  • version: 0.4.1
Latest release: almost 2 years ago - 18 downloads - 1,422 dependencies
apoorvababu/scviewerlite latest

Light version of SeuratViewer, an R Shiny website for viewing single cell RNA-Seq data

  • version: 0.3.0
Latest release: over 2 years ago - 14 downloads - 1,554 dependencies
tercen/tercen-studio-flowsuite 3.15-6

  • version: 0.4.1
Latest release: over 2 years ago - 93 downloads - 1,885 dependencies
cwong23/stx_env latest

Environment for spatial pipeline

  • version: 0.4.1
Latest release: about 2 years ago - 49 downloads - 1,606 dependencies
buddej/scshc 0.1.0

  • version: 0.4.1
Latest release: about 2 years ago - 17 downloads - 950 dependencies
weizhoujp/r-chtc-v1 latest

  • version: 0.4.1
Latest release: about 2 years ago - 5 downloads - 724 dependencies
kuangda/pc12 latest

  • version: 0.4.1
Latest release: over 2 years ago - 36 downloads - 1,326 dependencies
bigomics/omicsplayground v3.5.21

Self-service analytics for big omics data

  • version: 0.5.0, 0.4.1
Latest release: 5 months ago - 48,646 downloads - 1,551 dependencies
abelean/seurat_desctools 4.1.0

  • version: 0.4.1
Latest release: over 2 years ago - 800 downloads - 1,090 dependencies
bigomics/omicsplayground-base ub2204_v4

  • version: 0.4.1, 0.5.0
Latest release: about 1 year ago - 1,554 downloads - 1,536 dependencies
johnjun094/scgsea 0.3.11

DockerFile for benchmarking ssGSEA for single-cell RNA-seq

  • version: 0.3.0
Latest release: almost 2 years ago - 507 downloads - 924 dependencies
cmccornack/crmsc latest

  • version: 0.4.1
Latest release: about 2 years ago - 374 downloads - 1,476 dependencies
andrewatmp/testf latest

  • version: 0.4.1
Latest release: about 2 years ago - 468 downloads - 536 dependencies
jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

  • version: 0.3.0
Latest release: about 2 years ago - 269 downloads - 1,173 dependencies
bac3/microbiome latest

16S rRNA gene meta-barcoding NGS data analysis app - microbioma batterico. App streamlit.

  • version: 0.4.1
Latest release: over 2 years ago - 176 downloads - 752 dependencies
njjai/scrattch_mapping 1.1.0

  • version: 0.4.1
Latest release: 5 months ago - 1,690 downloads - 867 dependencies
weizhoujp/rchtc 4.3.0

  • version: 0.4.1
Latest release: almost 2 years ago - 141 downloads - 738 dependencies
tariship/dev_sync_directories latest

  • version: 0.4.1
Latest release: almost 2 years ago - 245 downloads - 421 dependencies
nathanprovin/cellcom 1.2.2

  • version: 0.4.1
Latest release: almost 2 years ago - 146 downloads - 596 dependencies
jafoltz/sc_python 8

  • version: 0.4.1
Latest release: over 2 years ago - 104 downloads - 438 dependencies
andrewatmp/qiime_unzip latest

  • version: 0.4.1
Latest release: almost 2 years ago - 150 downloads - 598 dependencies
etycksen/sc_deluxe 0.6

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

  • version: 0.3.0
Latest release: about 1 year ago - 2,031 downloads - 757 dependencies
gyusikhwang/tgs v1

  • version: 0.3.0
Latest release: over 2 years ago - 57 downloads - 1,095 dependencies
brusconi/seurat new

  • version: 0.4.1
Latest release: about 1 year ago - 124 downloads - 536 dependencies