Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : rstudioapi

Explore the latest package usage data for rstudioapi in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 1,988
Total downloads: 162,038,697

More details on packages.ecosyste.ms - JSON

jupyter/all-spark-notebook x86_64-spark-3.5.0

Python, Scala, R and Spark Jupyter Notebook Stack from https://github.com/jupyter/docker-stacks

  • version: 0.15.0
Latest release: over 1 year ago - 74,897,375 downloads - 2,095 dependencies
jupyter/datascience-notebook x86_64-python-3.11.6

Data Science Jupyter Notebook Python Stack from https://github.com/jupyter/docker-stacks

  • version: 0.15.0
Latest release: over 1 year ago - 34,322,165 downloads - 2,728 dependencies
broadinstitute/gatk 4.6.1.0

Official release repository for GATK versions 4.x

  • version: 0.13
Latest release: 3 months ago - 38,914,712 downloads - 912 dependencies
rocker/tidyverse 4.4.1

Version-stable build of R, rstudio, and R packages

  • version: 0.15.0
Latest release: 6 months ago - 25,141,853 downloads - 858 dependencies
apache/zeppelin 0.11.2

Apache Zeppelin

  • version: 0.13
Latest release: 7 months ago - 3,777,498 downloads - 1,492 dependencies
coala/base pre

A simple docker image featuring coala and it's dependencies.

  • version: 0.6
Latest release: over 7 years ago - 1,955,301 downloads - 1,827 dependencies
jupyter/r-notebook x86_64-python-3.11.6

R Jupyter Notebook Stack from https://github.com/jupyter/docker-stacks

  • version: 0.15.0
Latest release: over 1 year ago - 2,394,534 downloads - 1,718 dependencies
rocker/verse 4.4.2

Adds tex & related publishing packages to version-locked tidyverse image

  • version: 0.15.0
Latest release: 3 months ago - 1,556,518 downloads - 1,104 dependencies
rocker/geospatial 4.4.2

Docker-based Geospatial toolkit for R, built on versioned Rocker images

  • version: 0.15.0
Latest release: 3 months ago - 835,840 downloads - 1,336 dependencies
bioconductor/bioconductor_docker RELEASE_3_20

Bioconductor Docker Images

  • version: 0.15.0
Latest release: 3 months ago - 1,450,871 downloads - 1,397 dependencies
rocker/shiny-verse 4.4.2

Rocker Shiny image + Tidyverse R packages. Uses version-stable images.

  • version: 0.15.0
Latest release: 3 months ago - 1,258,802 downloads - 950 dependencies
veupathdb/rserve 8.1.4

  • version: 0.14
Latest release: 4 months ago - 626,889 downloads - 550 dependencies
broadinstitute/viral-core 2.0.21

  • version: 0.11
Latest release: over 4 years ago - 154,409 downloads - 419 dependencies
ccdlstaging/dr_downloaders 1.45.8

  • version: 0.14
Latest release: over 1 year ago - 127,834 downloads - 1,028 dependencies
dit4c/dit4c-container-qgis latest

DIT4C image for QGIS

  • version: 0.6
Latest release: about 8 years ago - 115,446 downloads - 884 dependencies
ashish1981/x86-r-z-appln latest

  • version: 0.11
Latest release: almost 4 years ago - 107,198 downloads - 1,150 dependencies
broadinstitute/gtex_eqtl V10

GTEx Consortium: eQTL pipeline based on FastQTL

  • version: 0.13
Latest release: almost 3 years ago - 103,038 downloads - 846 dependencies
ashish1981/shinyapp-sarb latest

  • version: 0.13
Latest release: almost 4 years ago - 91,399 downloads - 1,042 dependencies
broadinstitute/terra-jupyter-aou 2.1.13

  • version: 0.14
Latest release: about 2 years ago - 95,633 downloads - 4,112 dependencies
ccdlstaging/dr_affymetrix 1.45.8

  • version: 0.11
Latest release: over 1 year ago - 94,460 downloads - 1,220 dependencies
rocker/binder 4.4.1

Adds binder to rocker/tidyverse, providing JupyterHub access on rocker containers

  • version: 0.15.0
Latest release: 8 months ago - 107,789 downloads - 2,239 dependencies
rocker/ropensci 3.4.1

  • version: 0.7
Latest release: over 7 years ago - 88,724 downloads - 1,589 dependencies
broadinstitute/gatk-nightly 2024-08-17-4.6.0.0-10-g9f2fbb553-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

  • version: 0.13
Latest release: 5 months ago - 186,109 downloads - 912 dependencies
rocker/ml 4.4.1

Docker images with R + GPU support for machine learning libraries

  • version: 0.15.0
Latest release: 8 months ago - 74,198 downloads - 939 dependencies
ccdlstaging/dr_salmon 1.45.8

  • version: 0.14
Latest release: over 1 year ago - 61,084 downloads - 916 dependencies
nfcore/atacseq 1.2.2

A Docker container for the nf-core/atacseq pipeline.

  • version: 0.13
Latest release: over 2 years ago - 54,822 downloads - 352 dependencies
nfcore/chipseq 1.2.2

A docker image for nf-core/chipseq

  • version: 0.13
Latest release: almost 4 years ago - 52,400 downloads - 309 dependencies
ashish1981/s390x-r-appln-z 3.6.3

  • version: 0.13
Latest release: almost 4 years ago - 44,688 downloads - 1,475 dependencies
180a51c0/gh-action-buildapp latest

  • version: 0.11
Latest release: over 4 years ago - 56,914 downloads - 1,987 dependencies
dit4c/dit4c-container-jupyterlab latest

DIT4C container for Jupyter Lab

  • version: 0.6
Latest release: almost 8 years ago - 41,688 downloads - 585 dependencies
dit4c/dit4c-container-jupyter latest

  • version: 0.6
Latest release: almost 8 years ago - 25,937 downloads - 585 dependencies
rocker/ml-verse 4.4.1

  • version: 0.15.0
Latest release: 8 months ago - 53,386 downloads - 1,414 dependencies
nfcore/rnafusion 1.2.0

A Docker image for the nf-core/rnafusion pipeline.

  • version: 0.13
Latest release: over 4 years ago - 27,538 downloads - 1,302 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 0.15.0
Latest release: over 1 year ago - 25,819 downloads - 10,962 dependencies
dhspence/docker-genomic-analysis 122121

From Chris Miller's example

  • version: 0.13
Latest release: about 3 years ago - 19,985 downloads - 1,294 dependencies
fazenda/rsmd 64c1b962-4-14

  • version: 0.13
Latest release: over 2 years ago - 20,360 downloads - 180 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 0.13
Latest release: over 2 years ago - 14,641 downloads - 11,684 dependencies
ccdlstaging/dr_no_op 1.45.8

  • version: 0.11
Latest release: over 1 year ago - 17,904 downloads - 894 dependencies
ashish1981/zreferenceimplementation d17052022

  • version: 0.11
Latest release: over 2 years ago - 14,155 downloads - 1,150 dependencies
ocdr/dkube-datascience-rs-tf-cpu-multiuser v2.6-19

  • version: 0.11
Latest release: 12 months ago - 13,653 downloads - 747 dependencies
vanallenlab/sv-pipeline rlc_aou_evidencetable_fix

  • version: 0.14
Latest release: 10 months ago - 26,275 downloads - 1,231 dependencies
rocker/tensorflow 3.6.1

Tensorflow & Keras libraries for machine learning (CPU version)

  • version: 0.10
Latest release: about 5 years ago - 12,710 downloads - 534 dependencies
biocontainers/ea-utils v1.1.2dfsg-5-deb_cv1

  • version: 0.9.0
Latest release: over 5 years ago - 8,473 downloads - 644 dependencies
izone/hadoop 2.7.3

Hadoop 2.8.5 Ecosystem fully distributed, Jupyter Notebook, RStudio Server, Julia, jdbc implement

  • version: 0.7
Latest release: about 8 years ago - 8,309 downloads - 2,460 dependencies
rocker/r-rmd latest

Rocker container for Rmarkdown packages

  • version: 0.11
Latest release: over 4 years ago - 8,442 downloads - 584 dependencies
artemklevtsov/r-alpine 3.3.1

R docker images based on the alpine:latest

  • version: 0.7
Latest release: over 8 years ago - 7,422 downloads - 124 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 0.13
Latest release: over 2 years ago - 6,916 downloads - 12,259 dependencies
ashish1981/s390x-r-shiny latest

  • version: 0.13
Latest release: almost 4 years ago - 6,043 downloads - 1,474 dependencies
gesiscss/binder-juliasilge-2dsupervised-2dml-2dcase-2dstudies-2dcourse-1b08b0 eb13b6477d79950a9873e0966bd3aaaa0d043059

  • version: 0.13
Latest release: over 3 years ago - 5,816 downloads - 2,008 dependencies
gesiscss/binder-rubydata-2dbinder-af0da2 b77e1d22eafca6c2ba3a22a8c4ea723b24f7c07e

  • version: 0.13
Latest release: over 3 years ago - 5,347 downloads - 2,109 dependencies
hylleraas/singleuser 53

  • version: 0.13
Latest release: about 1 year ago - 11,917 downloads - 2,614 dependencies
tabbzi/terra-dogagingproject-data-curation latest

  • version: 0.13
Latest release: almost 3 years ago - 18,354 downloads - 706 dependencies
broadinstitute/viral-assemble latest

  • version: 0.11
Latest release: over 4 years ago - 4,486 downloads - 431 dependencies
broadinstitute/viral-phylo 2.0.21.5

  • version: 0.11
Latest release: over 4 years ago - 4,454 downloads - 431 dependencies
mesosphere/mesosphere-data-toolkit latest

  • version: 0.8
Latest release: about 6 years ago - 4,275 downloads - 1,270 dependencies
kbase/kbase sdkbase.latest

  • version: 0.3.1
Latest release: almost 7 years ago - 4,291 downloads - 2,934 dependencies
biocontainers/imputeme vv1.0.7_cv1

  • version: 0.13
Latest release: about 3 years ago - 3,948 downloads - 1,734 dependencies
biocontainers/isee-galaxy v3.13_cv1.0.0

  • version: 0.13
Latest release: over 3 years ago - 3,671 downloads - 1,218 dependencies
rocker/ml-gpu 3.6.0

Deprecated. see rocker/ml for modern GPU-enabled builds.

  • version: 0.10
Latest release: about 5 years ago - 3,562 downloads - 843 dependencies
ccdlstaging/dr_smasher 1.45.8

  • version: 0.11
Latest release: over 1 year ago - 7,326 downloads - 884 dependencies
qdidiscoveryservices/ms_pipeline latest

  • version: 0.13
Latest release: about 4 years ago - 3,042 downloads - 1,044 dependencies
ocdr/dkube-datascience-rs-sk-cpu-multiuser v0.23.2

  • version: 0.11
Latest release: about 4 years ago - 4,052 downloads - 751 dependencies
ocdr/dkube-datascience-rs-tf-cpu v2.0.0

  • version: 0.11
Latest release: about 4 years ago - 3,600 downloads - 722 dependencies
ashish1981/s390x-clefos-shiny latest

  • version: 0.13
Latest release: almost 4 years ago - 2,996 downloads - 1,467 dependencies
ccdlstaging/dr_illumina 1.45.8

  • version: 0.11
Latest release: over 1 year ago - 6,466 downloads - 893 dependencies
ocdr/dkube-datascience-rs-pytorch-cpu-multiuser v1.5.1

  • version: 0.11
Latest release: about 4 years ago - 3,682 downloads - 747 dependencies
patroonorg/patroondeps latest

  • version: 0.14
Latest release: almost 2 years ago - 3,003 downloads - 1,677 dependencies
gesiscss/binder-gesiscss-2dsmm-5fdemo-236470 dfd722278551f17b42f226ab5a196b2b4c58e298

  • version: 0.7
Latest release: over 3 years ago - 2,760 downloads - 1,911 dependencies
ocdr/dkube-datascience-rs-tf-gpu-multiuser v2.6-19

  • version: 0.11
Latest release: 12 months ago - 3,508 downloads - 841 dependencies
rocker/tensorflow-gpu 3.6.0

DEPRECATED. Please use `rocker/ml` instead

  • version: 0.10
Latest release: about 5 years ago - 2,705 downloads - 591 dependencies
ashish1981/x86-rbase-shiny-plumber d300422

  • version: 0.11
Latest release: over 2 years ago - 2,651 downloads - 955 dependencies
gesiscss/binder-serhatcevikel-2dbdm-5f2019-e7b363 1239175be24a02ff0e1bcd30f865011dc1fca7d4

  • version: 0.11
Latest release: about 4 years ago - 2,510 downloads - 2,536 dependencies
bgruening/docker-jupyter-notebook latest

Jupyter running in a docker container. This image can be used to integrate Jupyter into Galaxy

  • version: 0.13
Latest release: over 3 years ago - 2,874 downloads - 1,920 dependencies
snoopycrimecop/training-notebooks master_merge_daily

A set of Python Notebooks to demonstrate how to access the images and metadata from OMERO

  • version: 0.11
Latest release: over 3 years ago - 2,261 downloads - 2,866 dependencies
broadinstitute/terra-jupyter-gatk 0.0.13

  • version: 0.11
Latest release: almost 5 years ago - 2,359 downloads - 3,913 dependencies
mesosphere/mesosphere-jupyter-service latest

  • version: 0.8
Latest release: about 6 years ago - 2,273 downloads - 2,835 dependencies
databrewllc/odk-form-extraction a0ce218

  • version: 0.14
Latest release: 9 months ago - 66,109 downloads - 747 dependencies
araalinetworks/devproxy 0.9.91

  • version: 0.15.0
Latest release: almost 5 years ago - 2,361 downloads - 2,686 dependencies
dragonflyscience/niwaverse 2020-08-11

  • version: 0.11
Latest release: over 4 years ago - 1,791 downloads - 1,445 dependencies
ccdlstaging/dr_compendia 1.45.8

  • version: 0.11
Latest release: over 1 year ago - 4,957 downloads - 877 dependencies
rapporteket/dev weekly

  • version: 0.15.0
Latest release: about 1 year ago - 2,423 downloads - 1,346 dependencies