Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : BiocManager

Explore the latest package usage data for BiocManager in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 1,095
Total downloads: 14,676,699

More details on packages.ecosyste.ms - JSON

rocker/tidyverse 4.3.2

Version-stable build of R, rstudio, and R packages

  • version: 1.30.22
Latest release: about 1 year ago - 8,148,628 downloads - 858 dependencies
rocker/verse 4.3.2

Adds tex & related publishing packages to version-locked tidyverse image

  • version: 1.30.22
Latest release: about 1 year ago - 1,337,043 downloads - 1,104 dependencies
rocker/geospatial 4.3.2

Docker-based Geospatial toolkit for R, built on versioned Rocker images

  • version: 1.30.22
Latest release: about 1 year ago - 744,200 downloads - 1,336 dependencies
bioconductor/bioconductor_docker devel-R-devel

Bioconductor Docker Images

  • version: 1.30.22
Latest release: about 1 year ago - 1,124,807 downloads - 1,397 dependencies
rocker/shiny-verse 4.3.2

Rocker Shiny image + Tidyverse R packages. Uses version-stable images.

  • version: 1.30.22
Latest release: about 1 year ago - 949,642 downloads - 950 dependencies
veupathdb/rserve 7

  • version: 1.30.20
Latest release: 12 months ago - 624,940 downloads - 550 dependencies
ccdlstaging/dr_downloaders 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 1.30.20
Latest release: 12 months ago - 124,831 downloads - 1,028 dependencies
broadinstitute/terra-jupyter-aou 8bf6b13

  • version: 1.30.19
Latest release: almost 2 years ago - 92,816 downloads - 4,112 dependencies
ccdlstaging/dr_affymetrix f30409aceba66e19235b21b4ca8899e318e02e30

  • version: 1.30.20
Latest release: about 1 year ago - 92,270 downloads - 1,220 dependencies
rocker/binder 4.3.2

Adds binder to rocker/tidyverse, providing JupyterHub access on rocker containers

  • version: 1.30.22
Latest release: about 1 year ago - 95,871 downloads - 2,239 dependencies
vanallenlab/sv-pipeline-base gnomad_rf_abd6c1

  • version: 1.30.18
Latest release: almost 2 years ago - 88,219 downloads - 1,101 dependencies
rocker/ml 4.3.2

Docker images with R + GPU support for machine learning libraries

  • version: 1.30.22
Latest release: 11 months ago - 66,768 downloads - 939 dependencies
ccdlstaging/dr_salmon f30409aceba66e19235b21b4ca8899e318e02e30

  • version: 1.30.20
Latest release: about 1 year ago - 57,229 downloads - 916 dependencies
nfcore/atacseq latest

A Docker container for the nf-core/atacseq pipeline.

  • version: 1.30.15
Latest release: over 2 years ago - 54,429 downloads - 352 dependencies
nfcore/chipseq dev

A docker image for nf-core/chipseq

  • version: 1.30.12
Latest release: over 3 years ago - 50,176 downloads - 309 dependencies
dhspence/docker-basespace_chromoseq latest

  • version: 1.30.4
Latest release: over 5 years ago - 38,314 downloads - 559 dependencies
rocker/ml-verse 4.3.2

  • version: 1.30.22
Latest release: 11 months ago - 34,310 downloads - 1,414 dependencies
nfcore/rnafusion fusioninspector_2.8.0dev

A Docker image for the nf-core/rnafusion pipeline.

  • version: 1.30.18
Latest release: over 2 years ago - 24,036 downloads - 1,302 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 1.30.22
Latest release: about 1 year ago - 21,613 downloads - 10,962 dependencies
dhspence/docker-genomic-analysis 122121

From Chris Miller's example

  • version: 1.30.16
Latest release: almost 3 years ago - 19,678 downloads - 1,294 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 1.30.18
Latest release: over 2 years ago - 13,673 downloads - 11,684 dependencies
ccdlstaging/dr_no_op 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 1.30.20
Latest release: 12 months ago - 14,674 downloads - 894 dependencies
ocdr/dkube-datascience-rs-tf-cpu-multiuser v2.6-18

  • version: 1.30.10
Latest release: over 1 year ago - 13,462 downloads - 747 dependencies
vanallenlab/sv-pipeline filter_gt_029fa3b

  • version: 1.30.20
Latest release: over 1 year ago - 22,757 downloads - 1,231 dependencies
rocker/tensorflow 3.6.1

Tensorflow & Keras libraries for machine learning (CPU version)

  • version: 1.30.10
Latest release: almost 5 years ago - 12,227 downloads - 534 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 1.30.18
Latest release: over 2 years ago - 6,685 downloads - 12,259 dependencies
biocontainers/isee-galaxy v3.13_cv1.0.0

  • version: 1.30.16
Latest release: about 3 years ago - 3,660 downloads - 1,218 dependencies
rocker/ml-gpu 3.6.0

Deprecated. see rocker/ml for modern GPU-enabled builds.

  • version: 1.30.4
Latest release: almost 5 years ago - 3,524 downloads - 843 dependencies
ccdlstaging/dr_smasher 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 1.30.20
Latest release: 12 months ago - 4,929 downloads - 884 dependencies
qdidiscoveryservices/ms_pipeline latest

  • version: 1.30.10
Latest release: almost 4 years ago - 3,040 downloads - 1,044 dependencies
ocdr/dkube-datascience-rs-sk-cpu-multiuser v1.1.1-tiji-test

  • version: 1.30.10
Latest release: over 2 years ago - 3,480 downloads - 751 dependencies
ocdr/dkube-datascience-rs-tf-cpu v2.0.0-tiji-test

  • version: 1.30.10
Latest release: over 2 years ago - 3,001 downloads - 722 dependencies
ccdlstaging/dr_illumina 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 1.30.20
Latest release: 12 months ago - 3,448 downloads - 893 dependencies
ocdr/dkube-datascience-rs-pytorch-cpu-multiuser v1.9-18

  • version: 1.30.10
Latest release: over 1 year ago - 3,150 downloads - 747 dependencies
patroonorg/patroondeps latest

  • version: 1.30.20
Latest release: over 1 year ago - 2,754 downloads - 1,677 dependencies
ocdr/dkube-datascience-rs-tf-gpu-multiuser v2.6-18

  • version: 1.30.10
Latest release: over 1 year ago - 2,777 downloads - 841 dependencies
rocker/tensorflow-gpu 3.6.0

DEPRECATED. Please use `rocker/ml` instead

  • version: 1.30.4
Latest release: almost 5 years ago - 2,657 downloads - 591 dependencies
broadinstitute/terra-jupyter-gatk 8444561

  • version: 1.30.10
Latest release: over 4 years ago - 2,239 downloads - 3,913 dependencies
databrewllc/odk-form-extraction 3ffdc02

  • version: 1.30.19
Latest release: about 1 year ago - 33,252 downloads - 747 dependencies
ccdlstaging/dr_compendia 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 1.30.20
Latest release: 12 months ago - 2,332 downloads - 877 dependencies
rapporteket/dev main

  • version: 1.30.22
Latest release: almost 2 years ago - 1,958 downloads - 1,346 dependencies
rocker/cuda-dev 3.6.1

Adds CUDA and cudnn development libraries to rocker stack

  • version: 1.30.10
Latest release: almost 5 years ago - 1,775 downloads - 581 dependencies
tercen/dartrusttidy travis-17

  • version: 1.30.10
Latest release: over 3 years ago - 1,434 downloads - 700 dependencies
dceoy/r-tidyverse latest

R with tidyverse

  • version: 1.30.19
Latest release: almost 2 years ago - 1,242 downloads - 615 dependencies
ocdr/dkube-datascience-rs-tf-gpu v2.0.0-tiji-test

  • version: 1.30.10
Latest release: over 2 years ago - 1,025 downloads - 1,011 dependencies
tercen/runtime-r40 4.0.4-6

  • version: 1.30.12
Latest release: almost 2 years ago - 877 downloads - 639 dependencies
prismcmap/reports 94804f34cf31

  • version: 1.30.22, 1.30.21
Latest release: 12 months ago - 16,420 downloads - 1,108 dependencies
databrewllc/anomaly-detection acf56fc

This repository is used for forms anomaly detection

  • version: 1.30.19
Latest release: over 1 year ago - 4,920 downloads - 656 dependencies
nfcore/diaproteomics dev

A Docker container for nf-core/diaproteomics

  • version: 1.30.10
Latest release: over 3 years ago - 5,499 downloads - 488 dependencies
prismcmap/landing v0.2.2

  • version: 1.30.20
Latest release: over 1 year ago - 1,316 downloads - 877 dependencies
hoonbiolab/cellranger v1.0

  • version: 1.30.16
Latest release: almost 3 years ago - 919 downloads - 682 dependencies
mirekphd/ml-cpu-r35-rs 20190201

  • version: 1.30.4
Latest release: almost 6 years ago - 762 downloads - 9,716 dependencies
lucifer001/custom-rs-tf-multiuser gpu

  • version: 1.30.10
Latest release: over 3 years ago - 949 downloads - 807 dependencies
prismcmap/depmap_versions dd55695d58fb

  • version: 1.30.16
Latest release: 11 months ago - 1,452 downloads - 633 dependencies
tercen/runtime-r35 3.5.3-7

  • version: 1.30.4
Latest release: over 2 years ago - 700 downloads - 563 dependencies
afcai2c/r-studio-dl latest

R Studio with Deep Learning AI/ML packages installed [builds upon jlab-eda]

  • version: 1.30.16
Latest release: over 2 years ago - 635 downloads - 1,650 dependencies
seglh/exomedepth f4716ad

  • version: 1.30.22
Latest release: 12 months ago - 928 downloads - 548 dependencies
gene110/nipt_report latest

  • version: 1.30.10
Latest release: over 3 years ago - 785 downloads - 676 dependencies
tercen/tercen_studio 4.0.4-1

  • version: 1.30.12
Latest release: about 2 years ago - 490 downloads - 637 dependencies
rocker/gdal latest

Build gdal separately to avoid timeouts

  • version: 1.30.4
Latest release: about 5 years ago - 520 downloads - 748 dependencies
prismcmap/drc-module robust_DRC

  • version: 1.30.16
Latest release: over 1 year ago - 539 downloads - 647 dependencies
databrewllc/data-anonymization production

  • version: 1.30.19
Latest release: almost 2 years ago - 3,095 downloads - 651 dependencies
veitveit/vsclust release-1.2.1

For more details, see https://bitbucket.org/veitveit/vsclust

  • version: 1.30.20
Latest release: over 1 year ago - 445 downloads - 1,148 dependencies
fazenda/r-testing latest

ESTATCAMP's R testing environment.

  • version: 1.30.4
Latest release: almost 6 years ago - 416 downloads - 680 dependencies
qdidiscoveryservices/limma-voom 4.2.0

  • version: 1.30.17
Latest release: over 2 years ago - 1,002 downloads - 1,382 dependencies
recetox/aplcms latest

  • version: 1.30.10
Latest release: over 3 years ago - 386 downloads - 458 dependencies
qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 1.30.19
Latest release: about 1 year ago - 2,811 downloads - 1,464 dependencies
prismcmap/norm-module 26be7aa8ab48

  • version: 1.30.16
Latest release: almost 2 years ago - 380 downloads - 633 dependencies
nuest/ten-simple-rules-dockerfiles latest

  • version: 1.30.10
Latest release: about 4 years ago - 361 downloads - 752 dependencies
cristaniguti/onemap_git 2.8.0

R package to build linkage map for outcrossing, F2, backcross and RILs populations

  • version: 1.30.18
Latest release: over 2 years ago - 363 downloads - 1,581 dependencies
almahmoud/bioconductor_docker RELEASE_3_17

  • version: 1.30.20
Latest release: over 1 year ago - 359 downloads - 1,206 dependencies
vanallenlab/sv-pipeline-qc gnomad_v3_qc

  • version: 1.30.16
Latest release: almost 2 years ago - 338 downloads - 1,373 dependencies
qdidiscoveryservices/py3_cellranger 6.1.2

  • version: 1.30.10
Latest release: about 3 years ago - 302 downloads - 1,375 dependencies
inseefrlab/onyxia-sparkr r4.3.2-spark3.5.0-2024.01.15

A minimal R environment configured to use Spark through the SparkR package.

  • version: 1.30.22
Latest release: 10 months ago - 1,249 downloads - 2,922 dependencies
ocdr/dkube-datascience-rs-sk-cpu test-py

  • version: 1.30.10
Latest release: about 4 years ago - 299 downloads - 714 dependencies
nuest/rockerverse-paper latest

  • version: 1.30.10
Latest release: about 4 years ago - 286 downloads - 1,133 dependencies
veitveit/complexbrowser release-1.6

  • version: 1.30.19, 1.30.22
Latest release: 12 months ago - 316 downloads - 1,296 dependencies