Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : BH

Explore the latest package usage data for BH in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 1,347
Total downloads: 45,513,906

More details on packages.ecosyste.ms - JSON

broadinstitute/genomes-in-the-cloud 2.1.1

Genomes-in-the-cloud is a genomic analysis pipeline project developed by the Broad Institute.

  • version: 1.62.0-1
Latest release: over 8 years ago - 41,234,014 downloads - 951 dependencies
rocker/geospatial 4.4.2

Docker-based Geospatial toolkit for R, built on versioned Rocker images

  • version: 1.81.0-1
Latest release: 3 months ago - 835,840 downloads - 1,336 dependencies
veupathdb/rserve 8.1.4

  • version: 1.81.0-1
Latest release: 4 months ago - 626,889 downloads - 550 dependencies
ccdlstaging/dr_downloaders 1.45.8

  • version: 1.81.0-1
Latest release: over 1 year ago - 127,834 downloads - 1,028 dependencies
ashish1981/x86-r-z-appln latest

  • version: 1.72.0-3
Latest release: almost 4 years ago - 107,198 downloads - 1,150 dependencies
broadinstitute/gtex_eqtl V10

GTEx Consortium: eQTL pipeline based on FastQTL

  • version: 1.78.0-0
Latest release: almost 3 years ago - 103,038 downloads - 846 dependencies
ashish1981/shinyapp-sarb latest

  • version: 1.75.0-0
Latest release: almost 4 years ago - 91,399 downloads - 1,042 dependencies
broadinstitute/terra-jupyter-aou 2.1.13

  • version: 1.78.0-0
Latest release: about 2 years ago - 95,633 downloads - 4,112 dependencies
ccdlstaging/dr_affymetrix 1.45.8

  • version: 1.72.0-3
Latest release: over 1 year ago - 94,460 downloads - 1,220 dependencies
rocker/binder 4.4.1

Adds binder to rocker/tidyverse, providing JupyterHub access on rocker containers

  • version: 1.81.0-1
Latest release: 8 months ago - 107,789 downloads - 2,239 dependencies
nfcore/methylseq 1.6.1

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel.

  • version: 1.75.0-0
Latest release: over 3 years ago - 95,030 downloads - 297 dependencies
rocker/ropensci 3.4.1

  • version: 1.66.0-1
Latest release: over 7 years ago - 88,724 downloads - 1,589 dependencies
ccdlstaging/dr_salmon 1.45.8

  • version: 1.81.0-1
Latest release: over 1 year ago - 61,084 downloads - 916 dependencies
nfcore/atacseq 1.2.2

A Docker container for the nf-core/atacseq pipeline.

  • version: 1.75.0-0
Latest release: over 2 years ago - 54,822 downloads - 352 dependencies
nfcore/chipseq 1.2.2

A docker image for nf-core/chipseq

  • version: 1.75.0-0
Latest release: almost 4 years ago - 52,400 downloads - 309 dependencies
ashish1981/s390x-r-appln-z 3.6.3

  • version: 1.75.0-0
Latest release: almost 4 years ago - 44,688 downloads - 1,475 dependencies
180a51c0/gh-action-buildapp latest

  • version: 1.72.0-3, 1.66.0-1
Latest release: over 4 years ago - 56,914 downloads - 1,987 dependencies
dhspence/docker-basespace_chromoseq latest

  • version: 1.69.0-1
Latest release: over 5 years ago - 38,683 downloads - 559 dependencies
nfcore/eager 2.5.2

A Docker image for the nf-core/eager pipeline.

  • version: 1.78.0-0
Latest release: 7 months ago - 46,224 downloads - 738 dependencies
rocker/r-parallel 1.0.1

  • version: 1.69.0-1
Latest release: over 5 years ago - 29,803 downloads - 427 dependencies
rocker/ml-verse 4.4.1

  • version: 1.81.0-1
Latest release: 8 months ago - 53,386 downloads - 1,414 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 1.81.0-1
Latest release: over 1 year ago - 25,819 downloads - 10,962 dependencies
dhspence/docker-genomic-analysis 122121

From Chris Miller's example

  • version: 1.75.0-0
Latest release: about 3 years ago - 19,985 downloads - 1,294 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 1.78.0-0
Latest release: over 2 years ago - 14,641 downloads - 11,684 dependencies
ccdlstaging/dr_no_op 1.45.8

  • version: 1.72.0-3
Latest release: over 1 year ago - 17,904 downloads - 894 dependencies
ashish1981/zreferenceimplementation d17052022

  • version: 1.72.0-3
Latest release: over 2 years ago - 14,155 downloads - 1,150 dependencies
ocdr/dkube-datascience-rs-tf-cpu-multiuser v2.6-19

  • version: 1.72.0-3
Latest release: 12 months ago - 13,653 downloads - 747 dependencies
vanallenlab/sv-pipeline rlc_aou_evidencetable_fix

  • version: 1.81.0-1
Latest release: 10 months ago - 26,275 downloads - 1,231 dependencies
nfcore/ampliseq 1.2.0

A Docker image for nf-core/ampliseq.

  • version: 1.69.0-1
Latest release: almost 4 years ago - 10,515 downloads - 331 dependencies
rocker/tensorflow 3.6.1

Tensorflow & Keras libraries for machine learning (CPU version)

  • version: 1.69.0-1
Latest release: about 5 years ago - 12,710 downloads - 534 dependencies
rocker/r-rmd latest

Rocker container for Rmarkdown packages

  • version: 1.66.0-1
Latest release: over 4 years ago - 8,442 downloads - 584 dependencies
artemklevtsov/r-alpine 3.3.1

R docker images based on the alpine:latest

  • version: 1.66.0-1
Latest release: over 8 years ago - 7,422 downloads - 124 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 1.78.0-0
Latest release: over 2 years ago - 6,916 downloads - 12,259 dependencies
ashish1981/s390x-r-shiny latest

  • version: 1.75.0-0
Latest release: almost 4 years ago - 6,043 downloads - 1,474 dependencies
gesiscss/binder-juliasilge-2dsupervised-2dml-2dcase-2dstudies-2dcourse-1b08b0 eb13b6477d79950a9873e0966bd3aaaa0d043059

  • version: 1.72.0-3
Latest release: over 3 years ago - 5,816 downloads - 2,008 dependencies
mesosphere/mesosphere-data-toolkit latest

  • version: 1.66.0-1
Latest release: about 6 years ago - 4,275 downloads - 1,270 dependencies
biocontainers/imputeme vv1.0.7_cv1

  • version: 1.72.0-3
Latest release: about 3 years ago - 3,948 downloads - 1,734 dependencies
biocontainers/isee-galaxy v3.13_cv1.0.0

  • version: 1.75.0-0
Latest release: over 3 years ago - 3,671 downloads - 1,218 dependencies
rocker/ml-gpu 3.6.0

Deprecated. see rocker/ml for modern GPU-enabled builds.

  • version: 1.69.0-1
Latest release: about 5 years ago - 3,562 downloads - 843 dependencies
ccdlstaging/dr_smasher 1.45.8

  • version: 1.72.0-3
Latest release: over 1 year ago - 7,326 downloads - 884 dependencies
qdidiscoveryservices/ms_pipeline latest

  • version: 1.66.0-1
Latest release: about 4 years ago - 3,042 downloads - 1,044 dependencies
ocdr/dkube-datascience-rs-sk-cpu-multiuser v0.23.2

  • version: 1.72.0-3
Latest release: about 4 years ago - 4,052 downloads - 751 dependencies
ocdr/dkube-datascience-rs-tf-cpu v2.0.0

  • version: 1.72.0-3
Latest release: about 4 years ago - 3,600 downloads - 722 dependencies
ashish1981/s390x-clefos-shiny latest

  • version: 1.75.0-0
Latest release: almost 4 years ago - 2,996 downloads - 1,467 dependencies
ccdlstaging/dr_illumina 1.45.8

  • version: 1.72.0-3
Latest release: over 1 year ago - 6,466 downloads - 893 dependencies
ocdr/dkube-datascience-rs-pytorch-cpu-multiuser v1.5.1

  • version: 1.72.0-3
Latest release: about 4 years ago - 3,682 downloads - 747 dependencies
patroonorg/patroondeps latest

  • version: 1.81.0-1
Latest release: almost 2 years ago - 3,003 downloads - 1,677 dependencies
gesiscss/binder-gesiscss-2dsmm-5fdemo-236470 dfd722278551f17b42f226ab5a196b2b4c58e298

  • version: 1.69.0-1
Latest release: over 3 years ago - 2,760 downloads - 1,911 dependencies
ocdr/dkube-datascience-rs-tf-gpu-multiuser v2.6-19

  • version: 1.72.0-3
Latest release: 12 months ago - 3,508 downloads - 841 dependencies
rocker/tensorflow-gpu 3.6.0

DEPRECATED. Please use `rocker/ml` instead

  • version: 1.69.0-1
Latest release: about 5 years ago - 2,705 downloads - 591 dependencies
ashish1981/x86-rbase-shiny-plumber d300422

  • version: 1.72.0-3
Latest release: over 2 years ago - 2,651 downloads - 955 dependencies
gesiscss/binder-serhatcevikel-2dbdm-5f2019-e7b363 1239175be24a02ff0e1bcd30f865011dc1fca7d4

  • version: 1.72.0-3
Latest release: about 4 years ago - 2,510 downloads - 2,536 dependencies
broadinstitute/terra-jupyter-gatk 0.0.13

  • version: 1.72.0-3
Latest release: almost 5 years ago - 2,359 downloads - 3,913 dependencies
mesosphere/mesosphere-jupyter-service latest

  • version: 1.66.0-1
Latest release: about 6 years ago - 2,273 downloads - 2,835 dependencies
dhspence/docker-biscuit latest

  • version: 1.69.0-1
Latest release: about 6 years ago - 1,948 downloads - 807 dependencies
dragonflyscience/niwaverse 2020-08-11

  • version: 1.72.0-3
Latest release: over 4 years ago - 1,791 downloads - 1,445 dependencies
ccdlstaging/dr_compendia 1.45.8

  • version: 1.72.0-3
Latest release: over 1 year ago - 4,957 downloads - 877 dependencies
rocker/cuda-dev 3.6.1

Adds CUDA and cudnn development libraries to rocker stack

  • version: 1.69.0-1
Latest release: about 5 years ago - 1,874 downloads - 581 dependencies
tercen/dartrusttidy 1.0.10

  • version: 1.75.0-0
Latest release: almost 4 years ago - 1,579 downloads - 700 dependencies
gesiscss/binder-gesiscss-2ddata-5fscience-5fimage-117abb 49e91d93b12b6234447e34bd3a289a833841a4e8

  • version: 1.75.0-0
Latest release: over 3 years ago - 1,342 downloads - 1,885 dependencies
dragonflyscience/dragonverse-18.04 latest

  • version: 1.75.0-0
Latest release: over 2 years ago - 1,573 downloads - 1,440 dependencies
afcai2c/r-studio-eda 20230130il5

R Studio with Exploritory Data Analysis AI/ML packages installed

  • version: 1.78.0-0
Latest release: almost 2 years ago - 1,959 downloads - 702 dependencies
kbase/narrprereq 1.3

Narrative prerequisite base image (used by kbase/narrabase).

  • version: 1.65.0-1
Latest release: about 7 years ago - 1,075 downloads - 1,383 dependencies
kbase/metrics latest

  • version: 1.69.0-1
Latest release: over 3 years ago - 1,048 downloads - 973 dependencies
ocdr/dkube-datascience-rs-tf-gpu v2.0.0

  • version: 1.72.0-3
Latest release: about 4 years ago - 1,111 downloads - 1,011 dependencies
nfcore/airrflowreport dev

  • version: 1.81.0-1
Latest release: almost 2 years ago - 1,010 downloads - 409 dependencies
dragonflyscience/sharknado 2024-06-10

  • version: 1.78.0-0
Latest release: 8 months ago - 1,807 downloads - 2,516 dependencies
recetox/retip 0.5.4-recetox4

Retention Time prediction for metabolomics

  • version: 1.75.0-0
Latest release: almost 4 years ago - 1,184 downloads - 524 dependencies
biocontainers/ipo develop

A Tool for automated Optimization of XCMS Parameters

  • version: 1.65.0-1
Latest release: over 6 years ago - 1,002 downloads - 366 dependencies
kbase/errorlogging develop

  • version: 1.69.0-1
Latest release: about 4 years ago - 979 downloads - 973 dependencies
nfcore/circrna dev

Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.

  • version: 1.75.0-0
Latest release: over 2 years ago - 1,210 downloads - 654 dependencies
afcai2c/python-r-ai latest

Image with Python and R packages

  • version: 1.78.0-0
Latest release: over 2 years ago - 920 downloads - 851 dependencies
gesiscss/binder-lmartinoty-2dlmartinoty-e3b0bd c626ad4bba1c566a8af5d745f4386d02e9fe9b44

  • version: 1.69.0-1
Latest release: about 4 years ago - 845 downloads - 2,085 dependencies
tercen/runtime-r40 4.0.4-6

  • version: 1.75.0-0
Latest release: about 2 years ago - 1,053 downloads - 639 dependencies
nfcore/sarek 2.7.2

A Docker container for the nf-core/sarek pipeline

  • version: 1.78.0-0
Latest release: over 2 years ago - 1,069,006 downloads - 607 dependencies
intelliseqngs/gatk-4.1.7.0-hg38 1.0.1

  • version: 1.69.0-1
Latest release: over 4 years ago - 38,651 downloads - 842 dependencies
nfcore/slamseq 1.0.0

A docker image for nf-core/slamseq

  • version: 1.72.0-3
Latest release: over 4 years ago - 34,728 downloads - 354 dependencies
nfcore/hic 1.3.0

A docker container for the nf-core/hic pipeline.

  • version: 1.75.0-0
Latest release: over 3 years ago - 15,362 downloads - 257 dependencies
intelliseqngs/gatk-4.1.7.0 1.0.4

  • version: 1.69.0-1
Latest release: over 4 years ago - 10,133 downloads - 1,006 dependencies
nfcore/nanoseq 1.1.0

Nanopore demultiplexing, QC and alignment pipeline

  • version: 1.72.0-3
Latest release: about 4 years ago - 9,714 downloads - 340 dependencies
intelliseqngs/task_bam-metrics 1.2.8

  • version: 1.69.0-1
Latest release: over 4 years ago - 7,695 downloads - 1,007 dependencies
nfcore/scrnaseq 1.1.0

A Docker Container for the nf-core/scrnaseq pipeline.

  • version: 1.75.0-0
Latest release: almost 4 years ago - 7,770 downloads - 423 dependencies
nfcore/diaproteomics 1.2.4

A Docker container for nf-core/diaproteomics

  • version: 1.75.0-0
Latest release: almost 4 years ago - 7,092 downloads - 488 dependencies
intelliseqngs/gatk-4.1.6.0-hg38 1.1.0

  • version: 1.69.0-1
Latest release: almost 5 years ago - 4,297 downloads - 842 dependencies
intelliseqngs/gatk-4.1.6.0 2.0.2

  • version: 1.69.0-1
Latest release: over 4 years ago - 3,411 downloads - 842 dependencies
intelliseqngs/task_vcf-uniq 1.0.0

  • version: 1.66.0-1
Latest release: over 4 years ago - 2,284 downloads - 806 dependencies