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Package Usage : cran : gplots

Explore the latest package usage data for gplots in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 505
Total downloads: 35,670,094
Showing first 100 dependents

More details on packages.ecosyste.ms - JSON

qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 3.1.3
Latest release: about 2 years ago - 4,404 downloads - 1,464 dependencies
atingupta2005/rocker_tidyverse latest

  • version: 3.0.1.1
Latest release: about 6 years ago - 58 downloads - 1,055 dependencies
btrspg/r-env cache

  • version: 3.1.3
Latest release: 8 months ago - 315 downloads - 2,231 dependencies
ocdr/ds-apps 1.0.43

  • version: 3.1.3
Latest release: almost 2 years ago - 3,932 downloads - 3,778 dependencies
luisas/feelnc 0.1.1

  • version: 3.0.1.1
Latest release: about 6 years ago - 49 downloads - 662 dependencies
intelliseqngs/bcl-to-fq 1.0.2

  • version: 3.0.3
Latest release: almost 3 years ago - 199 downloads - 1,047 dependencies
koki/urchin_workflow_seurat 20250213

  • version: 3.1.3
Latest release: 10 months ago - 183 downloads - 1,471 dependencies
veitveit/coexpresso 0d86fb51b4b4cdc9a21ad900ae0f30e1eb9e828f

  • version: 3.1.1
Latest release: 3 months ago - 443 downloads - 1,733 dependencies
koki/tensor-projects-parasite 20220819

  • version: 3.1.3
Latest release: over 3 years ago - 91 downloads - 1,281 dependencies
seglh/snappy_kraken 4.0.0

https://git.kingspm.uk/KingsPM/snappy

  • version: 3.0.1
Latest release: almost 2 years ago - 93 downloads - 1,369 dependencies
biodancer/nasap_performance latest

write later

  • version: 3.1.1
Latest release: about 3 years ago - 119 downloads - 2,006 dependencies
vanessa/seurat latest

  • version: 3.0.1
Latest release: over 7 years ago - 54 downloads - 475 dependencies
genular/base_image 2.0.0

Base image used in PADNORA - https://github.com/genular/pandora

  • version: 3.1.3
Latest release: over 2 years ago - 356 downloads - 3,654 dependencies
intelliseqngs/task_bam-metrics-hg38 1.0.2

  • version: 3.0.3
Latest release: almost 3 years ago - 112 downloads - 1,144 dependencies
mlepetit/ranalysis 3.3.4

  • version: 3.1.3
Latest release: about 3 years ago - 221 downloads - 2,131 dependencies
aoliver44/nutrition_tools v08042025

Docker image for running helpful scripts, especially related to ML analyses in nutrition

  • version: 3.1.3
Latest release: 4 months ago - 820 downloads - 473 dependencies
prismcmap/sushi v0.0.2

  • version: 3.1.1
Latest release: almost 4 years ago - 1,331 downloads - 723 dependencies
nciccbr/charlie_index latest

  • version: 2.17.0
Latest release: over 2 years ago - 34 downloads - 709 dependencies
gnwanne/atac latest

  • version: 3.1.3
Latest release: almost 3 years ago - 30 downloads - 688 dependencies
iandennismiller/analyzer latest

Contains Python, Gephi, and RStudio Desktop. Based on /r/iandennismiller/vnc-desktop

  • version: 3.0.1.1
Latest release: over 6 years ago - 191 downloads - 2,327 dependencies
yosuketanigawa/rocker-geospatial-seurat latest

Docker image of Seurat installed on R Studio

  • version: 3.1.3
Latest release: over 2 years ago - 149 downloads - 512 dependencies
tariship/dev_sync_directories latest

  • version: 3.1.3
Latest release: about 2 years ago - 379 downloads - 421 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 3.1.3
Latest release: about 3 years ago - 194 downloads - 382 dependencies
adriansegura99/geneci_infer-network_meomi 4.0.0

  • version: 3.1.3
Latest release: 6 months ago - 163 downloads - 509 dependencies
prismcmap/base-clue-pseq v0.0.1

  • version: 3.1.1
Latest release: about 4 years ago - 116 downloads - 318 dependencies
cheyne0328/rstudio zxy

  • version: 3.1.3
Latest release: over 2 years ago - 24 downloads - 775 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 3.0.1
Latest release: over 7 years ago - 443 downloads - 9,302 dependencies
koki/tensor-project-parasite 20211013

  • version: 3.1.1
Latest release: about 4 years ago - 100 downloads - 206 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 3.1.3
Latest release: over 2 years ago - 155 downloads - 679 dependencies
sviatsidorov/granie_analysis 0.1

Analysis of gliogenesis in a mouse model using GRaNIE

  • version: 3.1.3
Latest release: almost 3 years ago - 98 downloads - 290 dependencies
evolomicsmbbt/rna_seq latest

  • version: 3.1.1
Latest release: almost 3 years ago - 138 downloads - 412 dependencies
nathanprovin/cellcom 1.2.2

  • version: 3.1.3
Latest release: over 2 years ago - 147 downloads - 596 dependencies
intiquan/iqdesktop latest

  • version: 3.1.1
Latest release: over 2 years ago - 376 downloads - 3,511 dependencies
zymoresearch/bio_resource_builder v1.0

  • version: 3.1.3
Latest release: over 2 years ago - 22 downloads - 335 dependencies
matzieb/shiny-4.0.3-seurat4-spatial latest

  • version: 3.1.3
Latest release: over 2 years ago - 20 downloads - 1,061 dependencies
afcai2c/r-studio-geo latest

  • version: 3.1.1
Latest release: over 4 years ago - 269 downloads - 2,113 dependencies
rgregstacey/seurat_image 2.1

  • version: 3.1.1, 3.1.3
Latest release: over 2 years ago - 113 downloads - 547 dependencies
gesiscss/binder-tlbbd-2dspring2018-2dlab-5f10-b89db5 85cb00a8af28ec9af53e79e947b0f4ff648544a6

  • version: 3.0.1
Latest release: almost 6 years ago - 72 downloads - 279 dependencies
payne6861/stereonote_non_conda_scmerge_seurat_harmony_batchelor_cca v1.0.0

stereonote_non_conda_scmerge_seurat_harmony_batchelor_cca

  • version: 3.1.3
Latest release: almost 3 years ago - 81 downloads - 1,943 dependencies
ipbhalle/biobyte latest

  • version: 3.1.3
Latest release: over 2 years ago - 22 downloads - 1,311 dependencies
recetox/xmsanalyzer 2.0.6.1-recetox1

  • version: 3.0.3
Latest release: about 5 years ago - 59 downloads - 588 dependencies
qdidiscoveryservices/seurat_cell_annotation latest

  • version: 3.1.3
Latest release: almost 3 years ago - 62 downloads - 699 dependencies
mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

  • version: 3.0.1
Latest release: over 7 years ago - 40 downloads - 9,414 dependencies
tipsarin/kubeflow-rstudio latest

rstudio for kubeflow

  • version: 3.1.1
Latest release: almost 4 years ago - 62 downloads - 1,312 dependencies
mattjmeier/r-odaf-hc-prod latest

  • version: 3.1.3
Latest release: almost 3 years ago - 50 downloads - 897 dependencies
koki/velocytor 20221015

  • version: 3.1.3
Latest release: about 3 years ago - 62 downloads - 1,452 dependencies
broadcptac/panoply_so_nmf_report 1_3

  • version: 3.1.1
Latest release: over 2 years ago - 21 downloads - 725 dependencies
haileyzhang/phospho-analyst v1.0.2

  • version: 3.1.3
Latest release: over 1 year ago - 226 downloads - 796 dependencies
gesiscss/binder-carjed-2ddoomsayer-85bbc5 651e939aaf1eaaf8af63957b67b7b5146ab90d6e

  • version: 3.0.1.1
Latest release: almost 6 years ago - 34 downloads - 1,660 dependencies
broadinstitute/gatk-nightly 2024-08-17-4.6.0.0-10-g9f2fbb553-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

  • version: 3.0.3
Latest release: over 1 year ago - 186,109 downloads - 912 dependencies
ztamayo/nbridge-os latest

  • version: 3.0.1.1
Latest release: over 6 years ago - 52 downloads - 827 dependencies
ghhenry/curio-seeker-pipeline latest

  • version: 3.1.3
Latest release: about 3 years ago - 37 downloads - 926 dependencies
dkendy/analise_credito_base v1

  • version: 3.1.3
Latest release: over 2 years ago - 32 downloads - 203 dependencies
jpsmith5/peppro 0.10.2

  • version: 3.1.3
Latest release: almost 3 years ago - 102 downloads - 1,163 dependencies
intelliseqngs/gatk-4.2.0.0-hg38 1.1.0

  • version: 3.0.3
Latest release: about 4 years ago - 183 downloads - 1,057 dependencies
brianyee/cropseq-essentials 1.0.0

  • version: 3.1.3
Latest release: over 2 years ago - 60 downloads - 2,274 dependencies
omicschef/rnaseqchef v1.1.6

RNAseqChef, an RNA-seq data controller highlighting gene expression features

  • version: 3.1.3
Latest release: 27 days ago - 1,916 downloads - 1,420 dependencies
dkendy/r_base_calculo latest

  • version: 3.1.3
Latest release: over 2 years ago - 75 downloads - 203 dependencies
intelliseqngs/gatk-4.2.4.1 1.0.1

  • version: 3.0.3
Latest release: almost 3 years ago - 177 downloads - 1,118 dependencies
commander121/rmarkdown 4.4.0d-b4

  • version: 3.1.1
Latest release: 9 months ago - 907 downloads - 1,625 dependencies
koki/bindsc 20220609

  • version: 3.1.3
Latest release: over 3 years ago - 52 downloads - 2,060 dependencies
rahulg603/gatk_samtools_docker latest

  • version: 3.0.3
Latest release: over 2 years ago - 15,899 downloads - 839 dependencies
biocontainers/bioconductor-ebseq v1.14.0-1-deb_cv1

  • version: 3.0.1
Latest release: over 7 years ago - 158 downloads - 418 dependencies
uabbds/zebrafish_telencephalon_atlas_app 1.0.0

  • version: 3.1.3
Latest release: over 2 years ago - 308 downloads - 1,409 dependencies
haileyzhang/lfq-analyst v1.2.6

A docker container for LFQ-Analyst

  • version: 3.1.3
Latest release: almost 2 years ago - 390 downloads - 1,496 dependencies
jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

  • version: 3.1.1
Latest release: over 2 years ago - 302 downloads - 1,173 dependencies
mshriver01/share_task_seurat latest

  • version: 3.1.3
Latest release: over 2 years ago - 394 downloads - 1,637 dependencies
biocontainers/bioconductor-metagenomeseq v1.16.0-2-deb_cv1

  • version: 3.0.1
Latest release: over 7 years ago - 148 downloads - 417 dependencies
mfsentma/atacseq latest

  • version: 3.1.3
Latest release: over 2 years ago - 34 downloads - 852 dependencies
chgyi/metaware_rna_denovo latest

  • version: 3.0.1.1
Latest release: over 6 years ago - 360 downloads - 2,095 dependencies
cgwyx/easymicrobiomer latest

The best practice for microbiome analysis using R

  • version: 3.1.3
Latest release: over 2 years ago - 47 downloads - 1,604 dependencies
alexthiery/archr 3.1

  • version: 3.1.3
Latest release: over 2 years ago - 202 downloads - 819 dependencies
intelliseqngs/collect-hs-metrics 1.0.0

  • version: 3.0.1.1
Latest release: over 5 years ago - 194 downloads - 928 dependencies
avi156/rocker-binder-upd 4.2.2

  • version: 3.1.3
Latest release: almost 3 years ago - 21 downloads - 2,271 dependencies
dhspence/docker-manta 1.5.0

  • version: 3.0.1
Latest release: almost 7 years ago - 233 downloads - 1,191 dependencies
dragonflyscience/antips-tracks 2022-12-19

  • version: 3.1.3
Latest release: almost 3 years ago - 286 downloads - 1,741 dependencies
adrianrh/swomse shiny_live

  • version: 3.1.3
Latest release: over 2 years ago - 303 downloads - 569 dependencies
nilesh0404/st_visualizer m1_0.1.2

  • version: 3.1.3
Latest release: about 2 years ago - 18 downloads - 1,422 dependencies
mziemann/enrichment_recipe latest

Example highly reproducible bioinformatics workflow including transcriptome and pathway analysis.

  • version: 3.1.3
Latest release: over 2 years ago - 54 downloads - 1,332 dependencies
alexthiery/schelper seurat-schelper-0.3.5

  • version: 3.1.1
Latest release: over 2 years ago - 389 downloads - 1,494 dependencies
mlepetit/rnormalisation 1.0.0

  • version: 3.1.3
Latest release: about 3 years ago - 94 downloads - 2,142 dependencies
chiajungl/scrna-extra 4.4.0-4.4

  • version: 3.1.3
Latest release: over 1 year ago - 866 downloads - 1,350 dependencies
qdidiscoveryservices/flowr 1.0

  • version: 3.1.3
Latest release: over 3 years ago - 146 downloads - 1,476 dependencies
luisas/rde latest

  • version: 3.1.0
Latest release: almost 5 years ago - 47 downloads - 549 dependencies
genular/pandora 2.0.0

PANDORA - https://pandora.atomic-lab.org

  • version: 3.1.3
Latest release: over 2 years ago - 1,976 downloads - 3,716 dependencies
uvarc/rstudio tam5xe

  • version: 3.1.3
Latest release: about 2 years ago - 35 downloads - 1,062 dependencies
markshill/clustering_tree_building-env latest

  • version: 3.1.3
Latest release: about 3 years ago - 43 downloads - 1,416 dependencies
natalie23gill/seurat-4-3_soupx-1-6-1_doubletfinder_67fb8b5 1.4

scRNA analysis- a collection of current tools, file used to build it is copied into /

  • version: 3.1.3
Latest release: over 2 years ago - 273 downloads - 1,392 dependencies
tercen/flowcut_operator 0.1.8

  • version: 3.1.3
Latest release: almost 2 years ago - 69 downloads - 578 dependencies
nciccbr/ccbr_fraser_1.10.2 latest

  • version: 3.1.1
Latest release: almost 3 years ago - 77 downloads - 293 dependencies
jafoltz/sc_python 8

  • version: 3.1.3
Latest release: over 2 years ago - 122 downloads - 438 dependencies
mattjmeier/r-odaf-hc latest

Under Development. Containerized version of the R-ODAF Health Canada Pipeline.

  • version: 3.1.3
Latest release: almost 3 years ago - 33 downloads - 598 dependencies
daltoncp/rstudio_celeganssinglecell 4.2_12

  • version: 3.1.3
Latest release: over 2 years ago - 293 downloads - 529 dependencies
broadinstitute/gatk 4.6.2.0

Official release repository for GATK versions 4.x

  • version: 3.1.3.1
Latest release: 8 months ago - 40,521,415 downloads - 513 dependencies
broadcptacdev/activedriver_mimp latest

  • version: 3.1.3
Latest release: over 2 years ago - 92 downloads - 374 dependencies
lishuangshuang3/dnbc4dev 2.0.3

  • version: 3.1.3
Latest release: over 2 years ago - 124 downloads - 1,043 dependencies
luisas/r_sc.simg latest

  • version: 3.1.0
Latest release: about 5 years ago - 18 downloads - 260 dependencies
gru4/scan2workinghg38 latest

  • version: 3.1.3
Latest release: over 2 years ago - 71 downloads - 776 dependencies
hoonbiolab/absolute v1.5

  • version: 3.1.3
Latest release: almost 3 years ago - 121 downloads - 346 dependencies