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Package Usage : cran : BiocVersion

Explore the latest package usage data for BiocVersion in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 752
Total downloads: 3,238,035
Showing first 100 dependents

More details on packages.ecosyste.ms - JSON

qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 3.14.0
Latest release: about 2 years ago - 4,404 downloads - 1,464 dependencies
btrspg/r-env cache

  • version: 3.18.1
Latest release: 10 months ago - 342 downloads - 2,231 dependencies
koki/urchin_workflow_seurat 20251014

  • version: 3.16.0
Latest release: 3 months ago - 367 downloads - 1,471 dependencies
qdidiscoveryservices/ms_pipeline latest

  • version: 3.12.0
Latest release: almost 5 years ago - 3,042 downloads - 1,044 dependencies
veitveit/coexpresso 0d86fb51b4b4cdc9a21ad900ae0f30e1eb9e828f

  • version: 3.14.0
Latest release: 5 months ago - 449 downloads - 1,733 dependencies
koki/tensor-projects-parasite 20220819

  • version: 3.15.2
Latest release: over 3 years ago - 91 downloads - 1,281 dependencies
inseefrlab/travail-collaboratif 0.1.0

  • version: 3.16.0
Latest release: about 3 years ago - 239 downloads - 1,119 dependencies
tercen/opencyto_operator 0.2.0

  • version: 3.12.0
Latest release: almost 4 years ago - 71 downloads - 1,514 dependencies
jfcal/causality-assessment-api 20221209112052dd638c

  • version: 3.10.1
Latest release: about 3 years ago - 177 downloads - 310 dependencies
austinhpatton123/cogeqc-1.2.0_r-4.2.2 latest

  • version: 3.16.0
Latest release: about 3 years ago - 186 downloads - 451 dependencies
biodancer/nasap_performance latest

write later

  • version: 3.14.0
Latest release: about 3 years ago - 119 downloads - 2,006 dependencies
genular/base_image 2.0.0

Base image used in PADNORA - https://github.com/genular/pandora

  • version: 3.9.0
Latest release: over 2 years ago - 362 downloads - 3,654 dependencies
mlepetit/ranalysis 3.3.4

  • version: 3.13.1
Latest release: about 3 years ago - 221 downloads - 2,131 dependencies
prismcmap/biomarker 4602f53feb5a

  • version: 3.12.0
Latest release: 11 months ago - 10,896 downloads - 633 dependencies
btrspg/genekitr 0.0.1

  • version: 3.17.1
Latest release: over 1 year ago - 204 downloads - 1,987 dependencies
eppicenter/mad4hatter sha-cb4911b

  • version: 3.17.1
Latest release: 4 months ago - 821 downloads - 739 dependencies
prismcmap/sushi v0.0.2

  • version: 3.12.0
Latest release: about 4 years ago - 1,518 downloads - 723 dependencies
weizhoujp/rchtc 4.3.0

  • version: 3.17.1
Latest release: over 2 years ago - 141 downloads - 738 dependencies
luisas/rannotation_forcats latest

  • version: 3.10.1
Latest release: over 5 years ago - 46 downloads - 89 dependencies
globusgenomics/picrust 1.0

  • version: 3.14.0
Latest release: almost 3 years ago - 130 downloads - 595 dependencies
tercen/xshift 0.0.6

  • version: 3.12.0
Latest release: over 4 years ago - 66 downloads - 826 dependencies
hoonbiolab/hmftools v1.1

  • version: 3.13.1
Latest release: over 4 years ago - 1,322 downloads - 693 dependencies
yosuketanigawa/rocker-geospatial-seurat latest

Docker image of Seurat installed on R Studio

  • version: 3.15.2
Latest release: almost 3 years ago - 149 downloads - 512 dependencies
intelliseqngs/bioconductor r-coverage-stats_v0.1

  • version: 3.10.1
Latest release: about 6 years ago - 27 downloads - 185 dependencies
tariship/dev_sync_directories latest

  • version: 3.16.0
Latest release: over 2 years ago - 396 downloads - 421 dependencies
andimajore/unpast_eval_container_asthma latest

  • version: 3.16.0
Latest release: over 2 years ago - 142 downloads - 486 dependencies
rocker/binder 4.4.1

Adds binder to rocker/tidyverse, providing JupyterHub access on rocker containers

  • version: 3.18.1
Latest release: over 1 year ago - 107,789 downloads - 2,239 dependencies
crukcibioinformatics/sequencingbase 9.5.4

  • version: 3.20.0
Latest release: about 2 months ago - 407 downloads - 1,183 dependencies
almahmoud/workshops-auto-spectratutorials latest

  • version: 3.16.0
Latest release: over 3 years ago - 89 downloads - 2,003 dependencies
hdsu/etbii2023 latest

  • version: 3.14.0
Latest release: about 3 years ago - 138 downloads - 358 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 3.16.0
Latest release: about 3 years ago - 195 downloads - 382 dependencies
adriansegura99/geneci_infer-network_meomi 4.0.0

  • version: 3.14.0
Latest release: 7 months ago - 163 downloads - 509 dependencies
prismcmap/base-clue-pseq v0.0.1

  • version: 3.12.0
Latest release: about 4 years ago - 116 downloads - 318 dependencies
cheyne0328/rstudio zxy

  • version: 3.17.1
Latest release: over 2 years ago - 24 downloads - 775 dependencies
koki/tensor-project-parasite 20211013

  • version: 3.13.1
Latest release: over 4 years ago - 107 downloads - 206 dependencies
sebrauschert/amplicon_pipeline v0.3.2

A pipeline for amplicon sequencing analysis of marine fish

  • version: 3.17.1
Latest release: over 2 years ago - 332 downloads - 571 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 3.17.1
Latest release: over 2 years ago - 155 downloads - 679 dependencies
sviatsidorov/granie_analysis 0.1

Analysis of gliogenesis in a mouse model using GRaNIE

  • version: 3.16.0
Latest release: almost 3 years ago - 98 downloads - 290 dependencies
evolomicsmbbt/rna_seq latest

  • version: 3.14.0
Latest release: about 3 years ago - 162 downloads - 412 dependencies
gesiscss/binder-ngs-2ddocs-2d2020-2dggg-2d298-2dfirst-2dday-2drnaseq-c342e4 dca58a4e2661655c1469b51f54f6baafdd836726

  • version: 3.10.1
Latest release: about 6 years ago - 138 downloads - 1,498 dependencies
nathanprovin/cellcom 1.2.2

  • version: 3.17.1
Latest release: over 2 years ago - 189 downloads - 596 dependencies
tercen/automated_gating_operator 1.0.3

  • version: 3.15.2
Latest release: almost 2 years ago - 207 downloads - 655 dependencies
tercen/tracksom_operator 0.1.5

  • version: 3.12.0
Latest release: almost 3 years ago - 144 downloads - 760 dependencies
gesiscss/binder-wlandau-2dlearndrake-4eaf31 37504de3434ab3b0fedf8680a95efeeb605bef4d

  • version: 3.10.1
Latest release: almost 6 years ago - 123 downloads - 447 dependencies
seglh/exomedepth f4716ad

  • version: 3.15.2
Latest release: about 2 years ago - 1,680 downloads - 548 dependencies
prismcmap/drc MTS028_PMTS079

  • version: 3.12.0
Latest release: 7 months ago - 6,397 downloads - 651 dependencies
matzieb/shiny-4.0.3-seurat4-spatial latest

  • version: 3.12.0
Latest release: over 2 years ago - 26 downloads - 1,061 dependencies
payne6861/stereonote_non_conda_scmerge_seurat_harmony_batchelor_cca v1.0.0

stereonote_non_conda_scmerge_seurat_harmony_batchelor_cca

  • version: 3.14.0
Latest release: about 3 years ago - 81 downloads - 1,943 dependencies
hoonbiolab/variantannotation_r v1.1

  • version: 3.10.1
Latest release: about 4 years ago - 110 downloads - 828 dependencies
ipbhalle/biobyte latest

  • version: 3.16.0
Latest release: over 2 years ago - 28 downloads - 1,311 dependencies
rtibiocloud/saige_gds v2.1.2_613afb4

  • version: 3.15.2
Latest release: about 2 years ago - 22 downloads - 1,172 dependencies
gesiscss/binder-r2d-g5b5b759-2i2c-2dorg-2dutoronto-2dr-2dimage-f9fba3 5e7aea3c30ff4157e2fe53e17b295f2e719b97a3

  • version: 3.18.1
Latest release: over 1 year ago - 31 downloads - 2,291 dependencies
chriswyatt/chopgo latest

  • version: 3.14.0
Latest release: over 3 years ago - 47 downloads - 255 dependencies
evolbioinfo/r-sra v3.6.1

  • version: 3.9.0
Latest release: over 6 years ago - 50 downloads - 466 dependencies
nuest/altrnative-paper latest

  • version: 3.10.1
Latest release: almost 6 years ago - 47 downloads - 1,178 dependencies
robsyme/cosmo latest

  • version: 3.16.0
Latest release: about 3 years ago - 45 downloads - 543 dependencies
hoonbiolab/vcf-kit v1.1

  • version: 3.10.1
Latest release: over 4 years ago - 86 downloads - 840 dependencies
qdidiscoveryservices/glimma 4.2.0

  • version: 3.15.2
Latest release: over 3 years ago - 81 downloads - 1,371 dependencies
chriswyatt/svm1071deseq2limma latest

  • version: 3.14.0
Latest release: about 4 years ago - 61 downloads - 327 dependencies
qdidiscoveryservices/rocker-tidyverse 4.2.2

  • version: 3.16.0
Latest release: about 3 years ago - 47 downloads - 617 dependencies
recetox/xmsanalyzer 2.0.6.1-recetox1

  • version: 3.11.1
Latest release: about 5 years ago - 90 downloads - 588 dependencies
js2264/fourdndata 1.1.0

  • version: 3.18.0
Latest release: over 2 years ago - 26 downloads - 1,273 dependencies
qdidiscoveryservices/seurat_cell_annotation latest

  • version: 3.16.0
Latest release: about 3 years ago - 75 downloads - 699 dependencies
hoonbiolab/gatk4_scnv v1.1

  • version: 3.10.1
Latest release: over 4 years ago - 62 downloads - 811 dependencies
koki/velocytor 20221015

  • version: 3.15.2
Latest release: over 3 years ago - 62 downloads - 1,452 dependencies
broadcptac/panoply_so_nmf_report 1_3

  • version: 3.10.1
Latest release: almost 3 years ago - 37 downloads - 725 dependencies
hoonbiolab/ascat v1.1

  • version: 3.10.1
Latest release: over 4 years ago - 41 downloads - 792 dependencies
koki/workflow 20210327

  • version: 3.12.0
Latest release: almost 5 years ago - 75 downloads - 1,265 dependencies
gesiscss/binder-ajstewartlang-2dbinder-5fdemo-a82af5 b2c39fc6050f1879a6707e4a703da12f7c935b1f

  • version: 3.10.1
Latest release: about 6 years ago - 33 downloads - 1,176 dependencies
haileyzhang/phospho-analyst v1.0.2

  • version: 3.16.0
Latest release: almost 2 years ago - 226 downloads - 796 dependencies
jpsmith5/peppro 0.10.2

  • version: 3.16.0
Latest release: about 3 years ago - 102 downloads - 1,163 dependencies
qdidiscoveryservices/bam_to_10x_counts latest

  • version: 3.14.0
Latest release: about 3 years ago - 215 downloads - 962 dependencies
alanocallaghan/high-dimensional-stats-r latest

  • version: 3.17.1
Latest release: about 3 years ago - 116 downloads - 1,601 dependencies
hoonbiolab/svaba r4

  • version: 3.10.1
Latest release: about 3 years ago - 62 downloads - 742 dependencies
omicschef/rnaseqchef v1.1.6

RNAseqChef, an RNA-seq data controller highlighting gene expression features

  • version: 3.17.1
Latest release: 2 months ago - 1,916 downloads - 1,420 dependencies
sagnikbanerjee15/ngpint 1.0.0

  • version: 3.15.0
Latest release: about 4 years ago - 45 downloads - 2,335 dependencies
bpimages/pcalg 2.7-8-arm64

  • version: 3.17.1
Latest release: over 2 years ago - 473 downloads - 361 dependencies
tercen/compare_means_operator 0.1.9

  • version: 3.15.2
Latest release: over 2 years ago - 196 downloads - 559 dependencies
commander121/rmarkdown 4.4.0d-b4

  • version: 3.17.1
Latest release: 11 months ago - 930 downloads - 1,625 dependencies
prismcmap/normalization APS005_BIAS_CORRECTED

  • version: 3.12.0
Latest release: 2 months ago - 1,341 downloads - 627 dependencies
koki/bindsc 20220609

  • version: 3.15.2
Latest release: over 3 years ago - 52 downloads - 2,060 dependencies
pieratio/shinyc19 latest

  • version: 3.16.0
Latest release: almost 3 years ago - 93 downloads - 1,130 dependencies
bpimages/bnlearn 4.8.3

  • version: 3.17.1
Latest release: over 2 years ago - 426 downloads - 349 dependencies
benolson/r_dada2_for_ris latest

  • version: 3.16.0
Latest release: over 2 years ago - 43 downloads - 657 dependencies
haileyzhang/lfq-analyst v1.2.6

A docker container for LFQ-Analyst

  • version: 3.16.0
Latest release: about 2 years ago - 392 downloads - 1,496 dependencies
jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

  • version: 3.12.0
Latest release: over 2 years ago - 303 downloads - 1,173 dependencies
mshriver01/share_task_seurat latest

  • version: 3.14.0
Latest release: over 2 years ago - 394 downloads - 1,637 dependencies
tercen/faust_operator 0.1.4

  • version: 3.12.0
Latest release: almost 2 years ago - 218 downloads - 992 dependencies
bpimages/benchpress 2.1.0

  • version: 3.17.1
Latest release: over 2 years ago - 759 downloads - 514 dependencies
tercen/diffcyt_operator 0.4.4

  • version: 3.15.2
Latest release: almost 2 years ago - 135 downloads - 1,563 dependencies
nuest/reproducible-research-at-giscience latest

  • version: 3.10.1
Latest release: over 4 years ago - 179 downloads - 1,132 dependencies
mfsentma/atacseq latest

  • version: 3.14.0
Latest release: almost 3 years ago - 34 downloads - 852 dependencies
bpimages/bidag 2.1.4

BiDAG R package

  • version: 3.17.1
Latest release: over 2 years ago - 468 downloads - 364 dependencies
andrewrrelmore/genepi_vscode test

  • version: 3.16.0
Latest release: over 2 years ago - 48 downloads - 1,188 dependencies
skchronicles/genome-seek v0.1.0

Official base image of the genome-seek pipeline: https://github.com/OpenOmics/genome-seek

  • version: 3.16.0
Latest release: almost 3 years ago - 687 downloads - 1,367 dependencies
hoonbiolab/hl_base v1.2

  • version: 3.10.1
Latest release: about 3 years ago - 177 downloads - 873 dependencies
hoonbiolab/sequenza v1.1

  • version: 3.10.1
Latest release: over 4 years ago - 36 downloads - 801 dependencies
chgyi/metaware_rna_denovo latest

  • version: 3.8.0
Latest release: almost 7 years ago - 360 downloads - 2,095 dependencies
qdidiscoveryservices/vcfcompare 1.0

  • version: 3.17.1
Latest release: over 2 years ago - 1,044 downloads - 784 dependencies
cgwyx/easymicrobiomer latest

The best practice for microbiome analysis using R

  • version: 3.18.0
Latest release: over 2 years ago - 47 downloads - 1,604 dependencies