Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
Package Usage : cran : treeio
Explore the latest package usage data for treeio in the cran ecosystem, including detailed information on package dependencies and their usage.
Total dependents: 107
Total downloads: 29,373
More details on packages.ecosyste.ms - JSON
mirekphd/ml-cpu-r40-rs-cust 20230912
- version: 1.24.2
nfcore/airrflowreport dev
- version: 1.22.0
veitveit/vsclust release-1.2.1
For more details, see https://bitbucket.org/veitveit/vsclust
- version: 1.22.0
bactopia/tools-pirate 1.7.1
- version: 1.14.0
koki/sctensor-experiments 20220208
- version: 1.18.1
koki/biocdev 20230818
- version: 1.25.3
austinhpatton123/cogeqc-1.2.0_r-4.2.2 latest
- version: 1.22.0
koki/sctensor-workshop sha-fa8c4cf
- version: 1.17.2
crukmi/mesa main
- version: 1.21.2
testalabgh/downstream signac-1.4.0
- version: 1.18.1
scgfacility/rstudio-course22 v0.11
image used to run the course 2022
- version: 1.22.0
hdsu/etbii2023 latest
- version: 1.18.1
mbwali/jupyterlab qiime2023
- version: 1.22.0
crukmi/mesa_dependencies latest
- version: 1.22.0
veitveit/coexpresso latest
- version: 1.18.1
mattjmeier/r-odaf-hc-prod latest
- version: 1.22.0
sheddn/bioinformatics-tools latest
- version: 1.18.1
etretiakov/workbench-session-complete jammy-2023.10.24-custom-12.5
- version: 1.25.3
kisudsoe/r-base latest
- version: 1.22.0
viascientific/rstudio-app 1.0
- version: 1.22.0
albertea/numbat_light 02
- version: 1.22.0
mattjmeier/r-odaf-hc latest
Under Development. Containerized version of the R-ODAF Health Canada Pipeline.
- version: 1.22.0
denglab/vpfkit_base latest
- version: 1.23.0
bakeronit/rstudio_hpc_cancer 0.1.3
rocker-rstudio with some R packages installed in cancer genomic analysis
- version: 1.24.3
mattjmeier/r-odaf-hc-base latest
- version: 1.22.0
stormgod/deepmaps-cpu latest
- version: 1.22.0
tamaraperteghella/r4_hormonit latest
- version: 1.18.1
sebimer/samba-v4-qiime2 2022.11
- version: 1.22.0
emersonchao/dsc180b latest
- version: 1.22.0
ethill/qiime2 latest
docker container for qiime2
- version: 1.22.0
gmillot/immcantation_v1.1 gitlab_v10.0
- version: 1.14.4
weishwu/chipseeker 1.34.1
- version: 1.22.0
gmillot/r_v4.1.2_ig_clustering_v1.1 gitlab_v9.7
https://gitlab.pasteur.fr/gmillot/dockerfiles/-/tree/v9.7
- version: 1.18.1
andyvs/testimage 3.0
- version: 1.22.0
viascientific/deseq2-docker 2.0
- version: 1.22.0
13883956158/shinyproxy-r 4.2.2
- version: 1.22.0
payne6861/clutserprofiler v1.0.0
- version: 1.23.0
compbiocore/dscov_sct 20221201
- version: 1.22.0
compbiocore/lee_isg_erv 20230306
- version: 1.22.0
jenfisher7/rstudio_sbae latest
- version: 1.22.0
shl198/rna_ppl latest
- version: 1.20.0
payne6861/stereonote_non_conda_clusterprofiler_enrichplot v1.0.1
stereonote_non_conda_clusterprofiler_enrichplot
- version: 1.23.0
firriver/crvs latest
- version: 1.23.1
mfsentma/rna latest
- version: 1.18.1
mercury/nf_qc_scrna v2
- version: 1.14.4
gmillot/r_v4.1.2_ig_clustering_v1.2 gitlab_v9.8
https://gitlab.pasteur.fr/gmillot/dockerfiles/-/tree/v9.8
- version: 1.18.1
danhumassmed/debrowser 1.0.1
Software for Bioinformatics pipelines DEBrowser
- version: 1.22.0
compbiocore/jupyterhub-docker-images-jh_image 20230524
- version: 1.22.0
weishwu/diffbind 3.6.5
- version: 1.20.2
wlc27/dcanr v1
- version: 1.22.0
tamaraperteghella/r4_gencode latest
- version: 1.18.1
brianyee/cropseq-essentials 1.0.0
- version: 1.18.0
cgwyx/easymicrobiomer latest
The best practice for microbiome analysis using R
- version: 1.25.0
cjchen/gxuclass 1.0
- version: 1.24.1
tjhackmann/fermentationexplorer latest
- version: 1.25.1
preethiilumina/diffbind 1.5
fixed genome name
- version: 1.22.0
louisk92/spapros_scpnmf v1.0
- version: 1.24.1
cbgr/cager261 1.4
Container for the CAGEr tool version 2.6.1.
- version: 1.24.2
weizhoujp/r-chtc-v1 latest
- version: 1.24.0
bianca7/clusterprofiler latest
- version: 1.25.4
kuangda/pc12 latest
- version: 1.20.2
omicsclass/genome-comparison v1.0
比较基因组分析镜像
- version: 1.22.0
cmccornack/crmsc latest
- version: 1.18.1
andrewatmp/testf latest
- version: 1.22.0
btrspg/genekitr latest
- version: 1.25.2.001
omicschef/rnaseqchef v1.0.9
RNAseqChef, an RNA-seq data controller highlighting gene expression features
- version: 1.24.3
bac3/microbiome latest
16S rRNA gene meta-barcoding NGS data analysis app - microbioma batterico. App streamlit.
- version: 1.22.0
sornnujah/sk-bactopia-nullarbor-report alpha1
- version: 1.18.1
mesti90/ecoli_hgt_all_in 1.1
- version: 1.22.0
sridnona/r4.2.0 v1
- version: 1.22.0
lroser/databricksbio latest
- version: 1.24.3
weizhoujp/rchtc 4.3.0
- version: 1.24.3
tariship/dev_sync_directories latest
- version: 1.22.0
nciccbr/ccbr_r_4.3.0 v1
- version: 1.24.1
sviatsidorov/granie_analysis 0.1
Analysis of gliogenesis in a mouse model using GRaNIE
- version: 1.22.0
andrewatmp/qiime_unzip latest
- version: 1.22.0
biocorecrg/microbiomeprofile 0.4
- version: 1.23.0
etycksen/sc_deluxe 0.2
- version: 1.22.0
gyusikhwang/tgs v1
- version: 1.18.1
biomehub/encodestatsbase 0.0.5
Basic docker image used as a base for EncodeStats.
- version: 1.24.3
omicschef/epigenomechef v1.1.3
- version: 1.24.3
jlphillips/csci 2024-Spring
MTSU Department of Computer Science Stack
- version: 1.22.0
wyangwu/r4.1.2 latest
- version: 1.27.0
bioxfu/xseurat2 latest
- version: 1.22.0
chunjiesamliu/scmocha latest
- version: 1.24.3
denglab/vpfkit latest
- version: 1.23.0
bioedge/edge_24_1_ubuntu18 20231115
- version: 1.22.0
jingxin/terrascpipe v0
- version: 1.23.1
qdidiscoveryservices/diffbind latest
- version: 1.24.1
jackiezhuqi/bio-rstudio latest
- version: 1.22.0
dcarrillouu/plot_genomes 0.2
- version: 1.23.0
cgrlab/qiime2 2023.5
- version: 1.22.0
btrspg/vscode-dkd-env latest
- version: 1.25.0.001
imegusu/rstudio_rnaseq_all3 latest
RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq
- version: 1.22.0
ycli1995/bioinfo_dev 1.0.1
- version: 1.24.3
omicsclass/pan-genome v1.0
- version: 1.22.0
etretiakov/rocker-session latest
- version: 1.23.1