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Package Usage : cran : clusterProfiler

Explore the latest package usage data for clusterProfiler in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 66
Total downloads: 28,301
Showing first 100 dependents

More details on packages.ecosyste.ms - JSON

btrspg/r-env cache

  • version: 4.10.0
Latest release: 8 months ago - 315 downloads - 2,231 dependencies
qdidiscoveryservices/ms_pipeline latest

  • version: 3.18.0
Latest release: almost 5 years ago - 3,042 downloads - 1,044 dependencies
veitveit/coexpresso 0d86fb51b4b4cdc9a21ad900ae0f30e1eb9e828f

  • version: 4.2.2
Latest release: 3 months ago - 443 downloads - 1,733 dependencies
btrspg/genekitr 0.0.1

  • version: 4.8.2
Latest release: over 1 year ago - 198 downloads - 1,987 dependencies
tariship/dev_sync_directories latest

  • version: 4.6.2
Latest release: about 2 years ago - 379 downloads - 421 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 4.6.0
Latest release: about 3 years ago - 194 downloads - 382 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 4.8.1
Latest release: over 2 years ago - 155 downloads - 679 dependencies
mattjmeier/r-odaf-hc-prod latest

  • version: 4.6.0
Latest release: almost 3 years ago - 50 downloads - 897 dependencies
brianyee/cropseq-essentials 1.0.0

  • version: 4.2.0
Latest release: over 2 years ago - 60 downloads - 2,274 dependencies
omicschef/rnaseqchef v1.1.4

RNAseqChef, an RNA-seq data controller highlighting gene expression features

  • version: 4.8.2
Latest release: 12 months ago - 1,365 downloads - 1,420 dependencies
chgyi/bio 3.5.1

  • version: 3.8.1
Latest release: about 7 years ago - 661 downloads - 1,077 dependencies
chgyi/metaware_rna_denovo latest

  • version: 3.10.1
Latest release: over 6 years ago - 360 downloads - 2,095 dependencies
cjchen/gxuclass 1.0

  • version: 4.8.1
Latest release: over 2 years ago - 19 downloads - 657 dependencies
mziemann/enrichment_recipe latest

Example highly reproducible bioinformatics workflow including transcriptome and pathway analysis.

  • version: 4.6.2
Latest release: over 2 years ago - 54 downloads - 1,332 dependencies
mattjmeier/r-odaf-hc latest

Under Development. Containerized version of the R-ODAF Health Canada Pipeline.

  • version: 4.6.0
Latest release: almost 3 years ago - 33 downloads - 598 dependencies
etretiakov/workbench-session-complete jammy-2024.09.19-custom-12.9

  • version: 4.8.2
Latest release: about 1 year ago - 1,187 downloads - 6,961 dependencies
etycksen/sc_deluxe 0.7

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

  • version: 4.6.2
Latest release: 7 months ago - 2,648 downloads - 757 dependencies
gyusikhwang/tgs v1

  • version: 4.2.2
Latest release: over 2 years ago - 57 downloads - 1,095 dependencies
qdidiscoveryservices/pipeline_docker-r_and_bioconductor latest

  • version: 3.14.3
Latest release: about 5 years ago - 10 downloads - 431 dependencies
mattjmeier/r-odaf-hc-base latest

  • version: 4.6.0
Latest release: almost 3 years ago - 20 downloads - 598 dependencies
stormgod/deepmaps-cpu latest

  • version: 4.6.2
Latest release: over 2 years ago - 114 downloads - 1,710 dependencies
omicschef/epigenomechef v1.1.5

  • version: 4.8.2
Latest release: over 1 year ago - 414 downloads - 1,066 dependencies
payne6861/clutserprofiler v1.0.0

  • version: 4.2.2
Latest release: about 3 years ago - 13 downloads - 1,793 dependencies
compbiocore/dscov_sct 20221201

  • version: 4.6.0
Latest release: about 3 years ago - 44 downloads - 1,031 dependencies
jenfisher7/rstudio_sbae latest

  • version: 4.6.0
Latest release: almost 3 years ago - 30 downloads - 1,604 dependencies
bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

  • version: 4.8.3
Latest release: about 2 years ago - 110 downloads - 1,150 dependencies
danhumassmed/debrowser 1.0.1

Software for Bioinformatics pipelines DEBrowser

  • version: 4.6.0
Latest release: over 2 years ago - 67 downloads - 1,319 dependencies
jackiezhuqi/bio-rstudio latest

  • version: 4.6.2
Latest release: over 2 years ago - 86 downloads - 1,158 dependencies
shl198/rna_ppl latest

  • version: 4.4.4
Latest release: almost 3 years ago - 24 downloads - 2,099 dependencies
btrspg/vscode-dkd-env latest

  • version: 4.2.2
Latest release: over 2 years ago - 59 downloads - 1,182 dependencies
payne6861/stereonote_non_conda_clusterprofiler_enrichplot v1.0.1

stereonote_non_conda_clusterprofiler_enrichplot

  • version: 4.2.2
Latest release: almost 3 years ago - 20 downloads - 1,689 dependencies
imegusu/rstudio_rnaseq_all3 latest

RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq

  • version: 4.7.1.003
Latest release: over 2 years ago - 33 downloads - 1,568 dependencies
mfsentma/rna latest

  • version: 4.2.2
Latest release: almost 3 years ago - 12 downloads - 807 dependencies
firriver/crvs latest

  • version: 4.2.2
Latest release: almost 3 years ago - 53 downloads - 1,490 dependencies
ycli1995/bioinfo_dev 1.1.0

  • version: 4.8.2
Latest release: over 1 year ago - 185 downloads - 4,337 dependencies
mercury/nf_qc_scrna v2

  • version: 3.18.1
Latest release: over 2 years ago - 39 downloads - 548 dependencies
chaunceyzhou/awesome_rnaseq v2.0

  • version: 3.14.3
Latest release: almost 2 years ago - 83 downloads - 465 dependencies
wyangwu/r4.1.2 latest

  • version: 4.2.2
Latest release: over 2 years ago - 93 downloads - 827 dependencies
omicsclass/pan-genome v1.0

  • version: 4.6.2
Latest release: over 2 years ago - 237 downloads - 3,108 dependencies
viascientific/deseq2-docker 2.0

  • version: 4.6.0, 4.6.2
Latest release: over 2 years ago - 134 downloads - 375 dependencies
compbiocore/jupyterhub-docker-images-jh_image 20230524

  • version: 4.6.2
Latest release: over 2 years ago - 139 downloads - 3,115 dependencies
bioxfu/xseurat2 latest

  • version: 4.6.0
Latest release: almost 3 years ago - 79 downloads - 982 dependencies
wlc27/dcanr v1

  • version: 4.6.0
Latest release: almost 3 years ago - 94 downloads - 1,681 dependencies
louisk92/spapros_scpnmf v1.0

  • version: 4.8.1
Latest release: over 2 years ago - 48 downloads - 1,422 dependencies
bianca7/mompreprocess latest

  • version: 4.9.2
Latest release: over 2 years ago - 415 downloads - 1,340 dependencies
andyvs/testimage 3.0

  • version: 4.6.0
Latest release: over 2 years ago - 47 downloads - 376 dependencies
bianca7/clusterprofiler latest

  • version: 4.9.3
Latest release: over 2 years ago - 55 downloads - 1,315 dependencies
fgualdr/env_gsea latest

  • version: 4.6.0
Latest release: over 2 years ago - 57 downloads - 566 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 4.8.2
Latest release: about 2 years ago - 29,205 downloads - 10,962 dependencies
qdidiscoveryservices/ubuntu-1604-pipeline_docker-r_and_bioconductor latest

  • version: 3.14.3
Latest release: about 5 years ago - 13 downloads - 1,153 dependencies
tamaraperteghella/r4_hormonit latest

  • version: 4.2.2
Latest release: over 2 years ago - 27 downloads - 1,528 dependencies
bixbeta/cluster_profiler v1

  • version: 3.18.1
Latest release: about 3 years ago - 18 downloads - 1,038 dependencies
viascientific/rstudio-app 1.0

  • version: 4.6.2
Latest release: over 2 years ago - 127 downloads - 1,074 dependencies
anusuiya/new latest

  • version: 4.6.2
Latest release: over 2 years ago - 17 downloads - 1,329 dependencies
testalabgh/downstream signac-1.4.0

  • version: 4.2.2
Latest release: over 2 years ago - 485 downloads - 3,517 dependencies
cmccornack/crmsc latest

  • version: 4.2.2
Latest release: over 2 years ago - 407 downloads - 1,476 dependencies
ericsalomaki/rnaseq_r4_2 latest

  • version: 4.6.0
Latest release: almost 3 years ago - 49 downloads - 989 dependencies
omicsclass/metagenomics latest

  • version: 4.6.2
Latest release: about 2 years ago - 75 downloads - 1,493 dependencies
kisudsoe/r-base latest

  • version: 4.6.2
Latest release: over 2 years ago - 127 downloads - 1,107 dependencies
lroser/databricksbio latest

  • version: 4.8.2
Latest release: over 2 years ago - 95 downloads - 975 dependencies
weishwu/chipseeker 1.34.1

  • version: 4.6.2
Latest release: over 2 years ago - 50 downloads - 423 dependencies
chunjiesamliu/scmocha latest

  • version: 4.8.2
Latest release: over 2 years ago - 74 downloads - 1,258 dependencies
13883956158/shinyproxy-r 4.2.2

  • version: 4.6.0
Latest release: about 3 years ago - 82 downloads - 312 dependencies
etretiakov/rocker-session latest

  • version: 4.8.1
Latest release: over 2 years ago - 78 downloads - 2,565 dependencies
tamaraperteghella/r4_gencode latest

  • version: 4.2.2
Latest release: over 2 years ago - 20 downloads - 1,460 dependencies
veitveit/vsclust release-1.3.2

For more details, see https://bitbucket.org/veitveit/vsclust

  • version: 4.6.2
Latest release: over 1 year ago - 1,092 downloads - 1,148 dependencies
qdidiscoveryservices/py3_cellranger 6.1.2

  • version: 3.16.0
Latest release: about 4 years ago - 343 downloads - 1,375 dependencies