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Package Usage : cran : S4Arrays

Explore the latest package usage data for S4Arrays in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 75
Total downloads: 28,693

More details on packages.ecosyste.ms - JSON

mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 1.0.4
Latest release: almost 2 years ago - 28,089 downloads - 10,962 dependencies
koki/biocdev 20230818

  • version: 1.1.5
Latest release: almost 2 years ago - 301 downloads - 1,504 dependencies
koki/delayedtensor-experiments 20240923

  • version: 1.1.5
Latest release: 10 months ago - 168 downloads - 1,295 dependencies
etretiakov/workbench-session-complete jammy-2024.09.19-custom-12.9

  • version: 1.0.5
Latest release: 10 months ago - 861 downloads - 6,961 dependencies
shl198/sc_ppl 202306

  • version: 1.0.1
Latest release: about 2 years ago - 63 downloads - 2,005 dependencies
sebrauschert/amplicon_pipeline v0.3.2

A pipeline for amplicon sequencing analysis of marine fish

  • version: 1.0.4
Latest release: about 2 years ago - 158 downloads - 571 dependencies
bioconductor/ismb.osca 124cbc0

  • version: 1.0.4
Latest release: about 2 years ago - 603 downloads - 1,422 dependencies
bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

  • version: 1.0.5
Latest release: over 1 year ago - 110 downloads - 1,150 dependencies
sameetmehta/docker_report_apptainer devel

  • version: 1.0.4
Latest release: about 2 years ago - 20 downloads - 352 dependencies
daltoncp/rstudio_celeganssinglecell 4.2_12

  • version: 1.0.6
Latest release: almost 2 years ago - 224 downloads - 529 dependencies
jwcarlson/genespace latest

  • version: 1.0.1
Latest release: about 2 years ago - 84 downloads - 212 dependencies
neutronstar21/rocker_tidyverse_2023_05_05_v1 latest

  • version: 1.0.1
Latest release: about 2 years ago - 15 downloads - 266 dependencies
yinxiu/variantalker v2.0

NextFlow pipeline to functionally annotate DNA variants in VCF files

  • version: 1.0.4
Latest release: about 2 years ago - 235 downloads - 1,068 dependencies
srynobio/diagnostic_rnaseq latest

  • version: 1.0.4
Latest release: over 2 years ago - 168 downloads - 1,441 dependencies
hoonbiolab/hmftools_cnv v3.8.4

  • version: 1.0.4
Latest release: about 2 years ago - 98 downloads - 985 dependencies
chiajungl/seurat 4.4.0-4.4

  • version: 1.0.4
Latest release: about 1 year ago - 114 downloads - 1,249 dependencies
cgwyx/easymicrobiomer latest

The best practice for microbiome analysis using R

  • version: 1.1.3
Latest release: about 2 years ago - 44 downloads - 1,604 dependencies
cjchen/gxuclass 1.0

  • version: 1.0.4
Latest release: about 2 years ago - 19 downloads - 657 dependencies
nilesh0404/st_visualizer m1_0.1.2

  • version: 1.0.4
Latest release: almost 2 years ago - 18 downloads - 1,422 dependencies
louisk92/spapros_scpnmf v1.0

  • version: 1.0.4
Latest release: about 2 years ago - 43 downloads - 1,422 dependencies
fallingstar10/gmadeomicsrocker tiny

  • version: 1.0.4
Latest release: over 1 year ago - 74 downloads - 1,224 dependencies
buddej/scshc 0.1.0

  • version: 1.0.4
Latest release: about 2 years ago - 17 downloads - 950 dependencies
cbgr/cager261 1.4

Container for the CAGEr tool version 2.6.1.

  • version: 1.0.4
Latest release: over 1 year ago - 58 downloads - 1,356 dependencies
weizhoujp/r-chtc-v1 latest

  • version: 1.0.1
Latest release: about 2 years ago - 5 downloads - 724 dependencies
altyn745/txsim latest

  • version: 1.0.5
Latest release: almost 2 years ago - 52 downloads - 1,684 dependencies
bumproo/rnaseqclass23 latest

  • version: 1.0.4
Latest release: about 2 years ago - 598 downloads - 904 dependencies
sophiewebster/mhe latest

  • version: 1.0.5
Latest release: about 2 years ago - 33,472 downloads - 620 dependencies
mparikhbroad/mast_workflow 1.0.2

  • version: 1.0.4
Latest release: about 2 years ago - 587 downloads - 1,607 dependencies
datashield/rock-dolomite-xenon 2.1.1

This DataSHIELD profile consists of the platform 'dolomite' and the profile 'xenon'.

  • version: 1.0.4
Latest release: over 1 year ago - 1,528 downloads - 1,410 dependencies
jorgeamaya/dada2_terra_iseq v1

  • version: 1.0.4
Latest release: almost 2 years ago - 392 downloads - 967 dependencies
chiajungl/smk-scrna-extra 4.3-7.30-4.3

  • version: 1.0.4
Latest release: about 2 years ago - 265 downloads - 1,384 dependencies
eppicenter/mad4hatter latest

  • version: 1.0.5
Latest release: over 2 years ago - 598 downloads - 739 dependencies
omicschef/rnaseqchef v1.1.4

RNAseqChef, an RNA-seq data controller highlighting gene expression features

  • version: 1.0.5
Latest release: 7 months ago - 1,257 downloads - 1,420 dependencies
commander121/rmarkdown 4.4.0d-b3

  • version: 1.0.6
Latest release: 7 months ago - 777 downloads - 1,625 dependencies
qdidiscoveryservices/vcfcompare 1.0

  • version: 1.0.5
Latest release: almost 2 years ago - 1,017 downloads - 784 dependencies
fallingstar10/hbsigrocker latest

  • version: 1.0.4
Latest release: about 2 years ago - 253 downloads - 1,223 dependencies
chiajungl/scrna-extra 4.4.0-4.4

  • version: 1.0.4
Latest release: about 1 year ago - 676 downloads - 1,350 dependencies
pipecraft/vsearch_dada2 0

  • version: 1.0.5
Latest release: over 1 year ago - 462 downloads - 785 dependencies
cjchen/scauclass_2023 1.0

  • version: 1.0.5
Latest release: almost 2 years ago - 110 downloads - 393 dependencies
shengqh/cqs_smallrnaseq 20240201

  • version: 1.0.6
Latest release: over 1 year ago - 398 downloads - 1,416 dependencies
lroser/databricksbio latest

  • version: 1.0.5
Latest release: almost 2 years ago - 92 downloads - 975 dependencies
weizhoujp/rchtc 4.3.0

  • version: 1.0.5
Latest release: almost 2 years ago - 141 downloads - 738 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 1.0.4
Latest release: about 2 years ago - 146 downloads - 679 dependencies
nathanprovin/cellcom 1.2.2

  • version: 1.0.5
Latest release: almost 2 years ago - 146 downloads - 596 dependencies
almurphy/mungesumstats latest

  • version: 1.1.4
Latest release: about 2 years ago - 70 downloads - 265 dependencies
brusconi/seurat new

  • version: 1.0.4
Latest release: about 1 year ago - 124 downloads - 536 dependencies
biomehub/encodestatsbase 0.0.6

Basic docker image used as a base for EncodeStats.

  • version: 1.0.6
Latest release: over 1 year ago - 430 downloads - 853 dependencies
omicschef/epigenomechef v1.1.5

  • version: 1.0.5
Latest release: over 1 year ago - 390 downloads - 1,066 dependencies
jlphillips/csci 2025-Spring-cu118

MTSU Department of Computer Science Stack

  • version: 1.0.5
Latest release: 3 months ago - 918 downloads - 3,721 dependencies
andrewsg/archr dev

  • version: 1.0.5
Latest release: over 1 year ago - 132 downloads - 1,356 dependencies
jorgeamaya/ci_barcode_terra_dada2_iseq v1

  • version: 1.0.4
Latest release: almost 2 years ago - 41 downloads - 483 dependencies
koki/tensor-projects-fly 20230516

  • version: 1.0.4
Latest release: about 2 years ago - 68 downloads - 222 dependencies
chunjiesamliu/scmocha latest

  • version: 1.0.5
Latest release: almost 2 years ago - 67 downloads - 1,258 dependencies
chiajungl/scrna 4.4.0-4.4

  • version: 1.0.4
Latest release: about 1 year ago - 94 downloads - 1,312 dependencies
qdidiscoveryservices/diffbind latest

  • version: 1.0.4
Latest release: about 2 years ago - 40 downloads - 526 dependencies
winuthayanon/rstudio 4.3.0

  • version: 1.0.5
Latest release: about 2 years ago - 128 downloads - 2,687 dependencies
lesbiangreat/bioinfor_dev v0.64

  • version: 1.0.4
Latest release: almost 2 years ago - 91 downloads - 3,779 dependencies
ycli1995/bioinfo_dev 1.1.0

  • version: 1.0.5
Latest release: about 1 year ago - 157 downloads - 4,337 dependencies
arnstrm2/rstudio 4.3.1

R studio with Bioconductor and snRNAseq packages

  • version: 1.0.5
Latest release: almost 2 years ago - 67 downloads - 1,444 dependencies
almadengenomics/arriba 2.4.0

  • version: 1.0.4
Latest release: almost 2 years ago - 40 downloads - 279 dependencies
alexdhill/complete-seq time

  • version: 1.0.5
Latest release: about 1 year ago - 1,773 downloads - 584 dependencies
etretiakov/rocker-session latest

  • version: 1.0.1
Latest release: about 2 years ago - 57 downloads - 2,565 dependencies
danhumassmed/de-seq-tools 1.0.2

Software for Bioinformatics pipelines HOMER, DESeq2, samtools, edgeR, rclone

  • version: 1.0.4
Latest release: 6 months ago - 59 downloads - 540 dependencies
daemontus/software-cell-oracle latest

  • version: 1.0.4
Latest release: about 2 years ago - 60 downloads - 1,013 dependencies
bmgcode/glimma v2

  • version: 1.0.4
Latest release: about 2 years ago - 56 downloads - 445 dependencies
almahmoud/shiny-iseehub anvil

  • version: 1.1.5
Latest release: about 2 years ago - 35 downloads - 1,591 dependencies
joshuatobin257/drop latest

  • version: 1.0.4
Latest release: almost 2 years ago - 16 downloads - 840 dependencies
uvarc/rstudio tam5xe

  • version: 1.0.6
Latest release: almost 2 years ago - 33 downloads - 1,062 dependencies
ajhodgkinson/mitogwas latest

  • version: 1.0.6
Latest release: almost 2 years ago - 82 downloads - 1,094 dependencies
luslab/archr_dev latest

  • version: 1.0.6
Latest release: almost 2 years ago - 42 downloads - 1,873 dependencies
bigdatainbiomedicine/inspect-r latest

  • version: 1.0.6
Latest release: over 1 year ago - 19 downloads - 643 dependencies
gm088/svm 071123

  • version: 1.0.4
Latest release: over 1 year ago - 41 downloads - 1,497 dependencies
louisk92/spapros_genebasis v1.0

  • version: 1.0.5
Latest release: about 2 years ago - 41 downloads - 1,419 dependencies
costanzopadovano/bioconductor_r_image jupyter_notebook_version

Docker image preconfigured with R and Bioconductor for streamlined bioinformatics data analysis.

  • version: 1.1.6
Latest release: almost 2 years ago - 43 downloads - 2,685 dependencies
btrspg/r-env cache

  • version: 1.2.0
Latest release: 4 months ago - 308 downloads - 2,231 dependencies
crukcibioinformatics/sequencingbase 9.3.4

  • version: 1.6.0
Latest release: 5 months ago - 182 downloads - 1,183 dependencies
cheyne0328/rstudio zxy

  • version: 1.0.4
Latest release: about 2 years ago - 24 downloads - 775 dependencies