Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : MatrixGenerics

Explore the latest package usage data for MatrixGenerics in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 459
Total downloads: 2,002,312

More details on packages.ecosyste.ms - JSON

veupathdb/rserve 7

  • version: 1.10.0
Latest release: 12 months ago - 624,940 downloads - 550 dependencies
broadinstitute/terra-jupyter-aou 8bf6b13

  • version: 1.6.0, 1.10.0
Latest release: almost 2 years ago - 92,816 downloads - 4,112 dependencies
nfcore/methylseq dev

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel.

  • version: 1.4.0
Latest release: over 3 years ago - 92,677 downloads - 297 dependencies
nfcore/eager 2.5.0

A Docker image for the nf-core/eager pipeline.

  • version: 1.2.1
Latest release: about 1 year ago - 40,624 downloads - 738 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 1.12.3
Latest release: about 1 year ago - 21,613 downloads - 10,962 dependencies
biocontainers/isee-galaxy v3.13_cv1.0.0

  • version: 1.5.1
Latest release: about 3 years ago - 3,660 downloads - 1,218 dependencies
patroonorg/patroondeps latest

  • version: 1.10.0
Latest release: over 1 year ago - 2,754 downloads - 1,677 dependencies
nfcore/airrflowreport dev

  • version: 1.10.0
Latest release: over 1 year ago - 994 downloads - 409 dependencies
nfcore/sarek 2.7.2

A Docker container for the nf-core/sarek pipeline

  • version: 1.2.1
Latest release: over 2 years ago - 1,052,189 downloads - 607 dependencies
nfcore/nanoseq dev

Nanopore demultiplexing, QC and alignment pipeline

  • version: 1.2.0
Latest release: almost 4 years ago - 9,677 downloads - 340 dependencies
seglh/exomedepth f4716ad

  • version: 1.8.1
Latest release: 12 months ago - 928 downloads - 548 dependencies
veitveit/vsclust release-1.2.1

For more details, see https://bitbucket.org/veitveit/vsclust

  • version: 1.10.0
Latest release: over 1 year ago - 445 downloads - 1,148 dependencies
qdidiscoveryservices/limma-voom 4.2.0

  • version: 1.8.0
Latest release: over 2 years ago - 1,002 downloads - 1,382 dependencies
qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 1.6.0
Latest release: about 1 year ago - 2,811 downloads - 1,464 dependencies
tercen/runtime-flowsuite 3.15-4

  • version: 1.8.1
Latest release: about 2 years ago - 353 downloads - 1,641 dependencies
cimendes/splicing-pipelines-nf 3.1.ubuntu

  • version: 1.4.0
Latest release: almost 2 years ago - 237 downloads - 227 dependencies
koki/sctensor-experiments 20220208

  • version: 1.6.0
Latest release: almost 3 years ago - 206 downloads - 2,071 dependencies
qdidiscoveryservices/scrna_downstream 1.1

  • version: 1.4.3
Latest release: almost 3 years ago - 354 downloads - 1,716 dependencies
koki/biocdev 20230818

  • version: 1.13.1
Latest release: over 1 year ago - 201 downloads - 1,504 dependencies
anand7899/rmarkdown latest

  • version: 1.10.0
Latest release: about 2 years ago - 262 downloads - 766 dependencies
prismcmap/sushi develop

  • version: 1.2.1
Latest release: 10 months ago - 221 downloads - 723 dependencies
hoonbiolab/hmftools v1.1

  • version: 1.4.0, 1.4.3
Latest release: about 3 years ago - 1,211 downloads - 693 dependencies
qdidiscoveryservices/bam_to_10x_counts latest

  • version: 1.6.0
Latest release: about 2 years ago - 172 downloads - 962 dependencies
koki/sctensor-workshop sha-fa8c4cf

  • version: 1.5.4
Latest release: about 3 years ago - 111 downloads - 2,087 dependencies
atttilacs/dsp_geomxtools latest

  • version: 1.6.0
Latest release: about 2 years ago - 114 downloads - 871 dependencies
atttilacs/seurat_big latest

  • version: 1.6.0
Latest release: almost 2 years ago - 495 downloads - 997 dependencies
jafoltz/scclassify latest

  • version: 1.6.0
Latest release: almost 2 years ago - 90 downloads - 1,079 dependencies
crukmi/mesa main

  • version: 1.9.1
Latest release: about 2 years ago - 91 downloads - 1,326 dependencies
testalabgh/downstream signac-1.4.0

  • version: 1.6.0
Latest release: over 1 year ago - 485 downloads - 3,517 dependencies
atttilacs/dsp_giotto latest

  • version: 1.6.0
Latest release: about 2 years ago - 101 downloads - 1,154 dependencies
mlepetit/ranalysis 3.3.4

  • version: 1.4.3
Latest release: about 2 years ago - 79 downloads - 2,131 dependencies
tercen/flowsuite 0.0.4

  • version: 1.2.1
Latest release: over 2 years ago - 99 downloads - 1,512 dependencies
dolphinnext/ont_variant_calling 1.0

  • version: 1.10.0
Latest release: almost 2 years ago - 80 downloads - 494 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 1.10.0
Latest release: almost 2 years ago - 75 downloads - 382 dependencies
hdsu/etbii2023 latest

  • version: 1.6.0
Latest release: almost 2 years ago - 73 downloads - 358 dependencies
qdidiscoveryservices/quantiseqr v1

  • version: 1.7.0
Latest release: over 2 years ago - 65 downloads - 1,201 dependencies
tercen/flowsom_operator 1.6.0

  • version: 1.8.0
Latest release: almost 2 years ago - 105 downloads - 1,563 dependencies
koki/annotationhub 20210323

  • version: 1.2.1
Latest release: over 3 years ago - 73 downloads - 1,250 dependencies
qdidiscoveryservices/ssgsea 1.0

  • version: 1.10.0
Latest release: almost 2 years ago - 65 downloads - 665 dependencies
millerh1/ste v1.0

  • version: 1.10.0
Latest release: almost 2 years ago - 9,929 downloads - 844 dependencies
tipsarin/rstudio 4.1.3viraltrack

  • version: 1.6.0
Latest release: almost 2 years ago - 54 downloads - 981 dependencies
lorentzb/gene8940_r 1.0

  • version: 1.10.0
Latest release: almost 2 years ago - 55 downloads - 926 dependencies
qdidiscoveryservices/bam_to_10x_counts_pandoc latest

  • version: 1.6.0
Latest release: almost 2 years ago - 51 downloads - 964 dependencies
doejgi/trinityrnaseq-wdl 2.11.0b

  • version: 1.10.0
Latest release: over 1 year ago - 331 downloads - 980 dependencies
maestsi/nf-m6anet v1

  • version: 1.2.1
Latest release: almost 2 years ago - 54 downloads - 645 dependencies
koki/delayedtensor-experiments 20230818

  • version: 1.13.1
Latest release: over 1 year ago - 57 downloads - 1,295 dependencies
khoulaha/jabba v1.0.0

  • version: 1.10.0
Latest release: almost 2 years ago - 42 downloads - 2,527 dependencies
tercen/debarcoding_cytof_operator 0.3.0

  • version: 1.8.1
Latest release: over 1 year ago - 109 downloads - 1,659 dependencies
koki/tensor-projects-machima 20220827

  • version: 1.8.1
Latest release: about 2 years ago - 49 downloads - 1,441 dependencies
hoonbiolab/pepatac v1.1

  • version: 1.4.0
Latest release: about 3 years ago - 43 downloads - 1,213 dependencies
mbwali/jupyterlab qiime2023

  • version: 1.10.0
Latest release: over 1 year ago - 56 downloads - 1,941 dependencies
crukmi/mesa_dependencies latest

  • version: 1.10.0
Latest release: over 1 year ago - 63 downloads - 1,393 dependencies
trust1/rbox v1

Methylation array work toolbox

  • version: 1.2.1
Latest release: over 1 year ago - 48 downloads - 912 dependencies
koki/urchin_workflow_seurat 20230616

  • version: 1.10.0
Latest release: over 1 year ago - 63 downloads - 1,471 dependencies
koki/tensor-projects-parasite 20220819

  • version: 1.8.1
Latest release: over 2 years ago - 43 downloads - 1,281 dependencies
tercen/opencyto_operator latest

  • version: 1.2.1
Latest release: over 2 years ago - 35 downloads - 1,514 dependencies
dmiller15/minfi 4.2.0

  • version: 1.8.0
Latest release: over 2 years ago - 35 downloads - 1,415 dependencies
bryanfisk/capybara latest

  • version: 1.6.0
Latest release: almost 2 years ago - 35 downloads - 1,067 dependencies
qdidiscoveryservices/glimma 4.2.0

  • version: 1.8.0
Latest release: over 2 years ago - 69 downloads - 1,371 dependencies
chriswyatt/svm1071deseq2limma latest

  • version: 1.6.0
Latest release: almost 3 years ago - 29 downloads - 327 dependencies
mattjmeier/r-odaf-hc-prod latest

  • version: 1.10.0
Latest release: almost 2 years ago - 35 downloads - 897 dependencies
qdidiscoveryservices/seurat_cell_annotation latest

  • version: 1.10.0
Latest release: almost 2 years ago - 34 downloads - 699 dependencies
koki/velocytor 20221015

  • version: 1.8.1
Latest release: about 2 years ago - 39 downloads - 1,452 dependencies
koki/workflow 20210327

  • version: 1.2.1
Latest release: over 3 years ago - 40 downloads - 1,265 dependencies
galclbl/epityping latest

A repository for the epityping tool container

  • version: 1.10.0
Latest release: almost 2 years ago - 56 downloads - 123 dependencies
jpsmith5/peppro latest

  • version: 1.10.0
Latest release: almost 2 years ago - 29 downloads - 1,163 dependencies
alanocallaghan/high-dimensional-stats-r latest

  • version: 1.11.0
Latest release: almost 2 years ago - 91 downloads - 1,601 dependencies
sagnikbanerjee15/ngpint 1.0.0

  • version: 1.7.0
Latest release: about 3 years ago - 28 downloads - 2,335 dependencies
porchard/decontx 20230104

  • version: 1.10.0
Latest release: almost 2 years ago - 28 downloads - 830 dependencies
haileyzhang/lfq-analyst v1.2.6

A docker container for LFQ-Analyst

  • version: 1.10.0
Latest release: 12 months ago - 89 downloads - 1,496 dependencies
tercen/faust_operator 0.1.4

  • version: 1.8.0
Latest release: 10 months ago - 58 downloads - 992 dependencies
tercen/diffcyt_operator 0.4.2

  • version: 1.8.0
Latest release: over 1 year ago - 49 downloads - 1,563 dependencies
prangannath/rna_seq latest

Container for EvolOMICS RNA_Seq pipeline

  • version: 1.6.0
Latest release: almost 2 years ago - 26 downloads - 1,382 dependencies
tercen/compensate_cytof_operator 0.0.7

  • version: 1.8.1
Latest release: almost 2 years ago - 30 downloads - 1,643 dependencies
tercen/automated_gating_operator 1.0.0

  • version: 1.8.1
Latest release: about 1 year ago - 69 downloads - 655 dependencies
tercen/tracksom_operator 0.1.5

  • version: 1.2.1
Latest release: over 1 year ago - 45 downloads - 760 dependencies
mlepetit/rnormalisation 1.0

  • version: 1.4.3
Latest release: about 2 years ago - 33 downloads - 2,142 dependencies
koki/bindsc 20220609

  • version: 1.8.0
Latest release: over 2 years ago - 22 downloads - 2,060 dependencies
sheddn/bioinformatics-tools latest

  • version: 1.6.0
Latest release: almost 2 years ago - 41 downloads - 2,518 dependencies
weishwu/systempiper 12022022

  • version: 1.8.1
Latest release: almost 2 years ago - 19 downloads - 1,383 dependencies
etretiakov/workbench-session-complete jammy-2023.10.24-custom-12.5

  • version: 1.12.3
Latest release: about 1 year ago - 58 downloads - 6,961 dependencies
biodancer/nasap_performance latest

write later

  • version: 1.6.0
Latest release: almost 2 years ago - 18 downloads - 2,006 dependencies
qdidiscoveryservices/flowr 1.0

  • version: 1.8.0
Latest release: over 2 years ago - 17 downloads - 1,476 dependencies
koki/urchin_workflow_r 20220531

  • version: 1.8.0
Latest release: over 2 years ago - 17 downloads - 1,253 dependencies
leepc12/test-jupyterhub v0.2.0

test-jupyterhub

  • version: 1.10.0
Latest release: over 1 year ago - 30 downloads - 1,857 dependencies
fgualdr/envrperm latest

  • version: 1.10.0
Latest release: almost 2 years ago - 18 downloads - 480 dependencies
mbaardwijk/hmftools latest

  • version: 1.6.0
Latest release: over 1 year ago - 25 downloads - 405 dependencies
shl198/sc_ppl 202306

  • version: 1.12.0
Latest release: over 1 year ago - 52 downloads - 2,005 dependencies
h836472/cs_mainimage test

  • version: 1.6.0
Latest release: almost 2 years ago - 14 downloads - 769 dependencies
froeuhouais/r_image latest

R image with DESeq2

  • version: 1.10.0
Latest release: almost 2 years ago - 18 downloads - 424 dependencies
haileyzhang/fragpipe-analyst v0.23

A Docker container of Fragpipe-Analyst

  • version: 1.10.0
Latest release: over 1 year ago - 34 downloads - 1,511 dependencies
yiluxiangbei/pumpkin-genomealign-notebook 1.0

  • version: 1.6.0
Latest release: almost 3 years ago - 13 downloads - 2,028 dependencies