Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : testRcppClass

Explore the latest package usage data for testRcppClass in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 2,399
Total downloads: 210,422,937

More details on packages.ecosyste.ms - JSON

jupyter/all-spark-notebook x86_64-spark-3.5.0

Python, Scala, R and Spark Jupyter Notebook Stack from https://github.com/jupyter/docker-stacks

  • version: 0.1
Latest release: about 1 year ago - 74,157,453 downloads - 2,095 dependencies
broadinstitute/genomes-in-the-cloud 2.4.0-1501007820

Genomes-in-the-cloud is a genomic analysis pipeline project developed by the Broad Institute.

  • version: 0.1
Latest release: over 7 years ago - 40,948,348 downloads - 951 dependencies
jupyter/datascience-notebook x86_64-python-3.11.6

Data Science Jupyter Notebook Python Stack from https://github.com/jupyter/docker-stacks

  • version: 0.1
Latest release: about 1 year ago - 31,656,816 downloads - 2,728 dependencies
broadinstitute/gatk 4.5.0.0

Official release repository for GATK versions 4.x

  • version: 0.1
Latest release: 11 months ago - 31,988,536 downloads - 912 dependencies
rocker/tidyverse 4.3.2

Version-stable build of R, rstudio, and R packages

  • version: 0.1
Latest release: about 1 year ago - 8,148,628 downloads - 858 dependencies
openanalytics/shinyproxy-demo latest

Image to demo how to deploy Shiny apps using ShinyProxy

  • version: 0.1
Latest release: over 2 years ago - 3,769,147 downloads - 1,175 dependencies
apache/zeppelin 0.11.0

Apache Zeppelin

  • version: 0.1
Latest release: 11 months ago - 3,480,279 downloads - 1,492 dependencies
rocker/shiny 4.3.2

  • version: 0.1
Latest release: about 1 year ago - 2,676,242 downloads - 792 dependencies
jupyter/r-notebook x86_64-python-3.11.6

R Jupyter Notebook Stack from https://github.com/jupyter/docker-stacks

  • version: 0.1
Latest release: about 1 year ago - 1,757,302 downloads - 1,718 dependencies
broadinstitute/gatk3 3.8-1

Official release repository for GATK versions 3.x

  • version: 0.1
Latest release: over 6 years ago - 1,387,112 downloads - 498 dependencies
rocker/verse 4.3.2

Adds tex & related publishing packages to version-locked tidyverse image

  • version: 0.1
Latest release: about 1 year ago - 1,337,043 downloads - 1,104 dependencies
rocker/geospatial 4.3.2

Docker-based Geospatial toolkit for R, built on versioned Rocker images

  • version: 0.1
Latest release: about 1 year ago - 744,200 downloads - 1,336 dependencies
nfcore/rnaseq dev

Docker Image for nf-core/rnaseq project.

  • version: 0.1
Latest release: about 4 years ago - 659,186 downloads - 208 dependencies
bioconductor/bioconductor_docker devel-R-devel

Bioconductor Docker Images

  • version: 0.1
Latest release: about 1 year ago - 1,124,807 downloads - 1,397 dependencies
rocker/shiny-verse 4.3.2

Rocker Shiny image + Tidyverse R packages. Uses version-stable images.

  • version: 0.1
Latest release: about 1 year ago - 949,642 downloads - 950 dependencies
veupathdb/rserve 7

  • version: 0.1
Latest release: 12 months ago - 624,940 downloads - 550 dependencies
rocker/r-apt disco

R-related apt-get information

  • version: 0.1
Latest release: over 4 years ago - 215,662 downloads - 346 dependencies
broadinstitute/viral-core latest

  • version: 0.1
Latest release: over 4 years ago - 151,955 downloads - 419 dependencies
ccdlstaging/dr_downloaders 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 0.1
Latest release: 12 months ago - 124,831 downloads - 1,028 dependencies
dit4c/dit4c-container-qgis latest

DIT4C image for QGIS

  • version: 0.1
Latest release: almost 8 years ago - 115,438 downloads - 884 dependencies
ashish1981/x86-r-z-appln latest

  • version: 0.1
Latest release: over 3 years ago - 106,632 downloads - 1,150 dependencies
broadinstitute/gtex_eqtl V10

GTEx Consortium: eQTL pipeline based on FastQTL

  • version: 0.1
Latest release: over 2 years ago - 102,887 downloads - 846 dependencies
ashish1981/shinyapp-sarb latest

  • version: 0.1
Latest release: over 3 years ago - 91,367 downloads - 1,042 dependencies
broadinstitute/terra-jupyter-aou 8bf6b13

  • version: 0.1
Latest release: almost 2 years ago - 92,816 downloads - 4,112 dependencies
ccdlstaging/dr_affymetrix f30409aceba66e19235b21b4ca8899e318e02e30

  • version: 0.1
Latest release: about 1 year ago - 92,270 downloads - 1,220 dependencies
rocker/binder 4.3.2

Adds binder to rocker/tidyverse, providing JupyterHub access on rocker containers

  • version: 0.1
Latest release: about 1 year ago - 95,871 downloads - 2,239 dependencies
rocker/ropensci latest

  • version: 0.1
Latest release: over 6 years ago - 88,618 downloads - 1,589 dependencies
broadinstitute/gatk-nightly 2024-01-06-4.5.0.0-3-gb68fadc5f-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

  • version: 0.1
Latest release: 11 months ago - 86,066 downloads - 912 dependencies
rocker/ml 4.3.2

Docker images with R + GPU support for machine learning libraries

  • version: 0.1
Latest release: 11 months ago - 66,768 downloads - 939 dependencies
ccdlstaging/dr_salmon f30409aceba66e19235b21b4ca8899e318e02e30

  • version: 0.1
Latest release: about 1 year ago - 57,229 downloads - 916 dependencies
nfcore/atacseq latest

A Docker container for the nf-core/atacseq pipeline.

  • version: 0.1
Latest release: over 2 years ago - 54,429 downloads - 352 dependencies
nfcore/chipseq dev

A docker image for nf-core/chipseq

  • version: 0.1
Latest release: over 3 years ago - 50,176 downloads - 309 dependencies
ashish1981/s390x-r-appln-z latest

  • version: 0.1
Latest release: over 3 years ago - 44,192 downloads - 1,475 dependencies
180a51c0/gh-action-buildapp latest

  • version: 0.1
Latest release: over 4 years ago - 48,804 downloads - 1,987 dependencies
dhspence/docker-basespace_chromoseq latest

  • version: 0.1
Latest release: over 5 years ago - 38,314 downloads - 559 dependencies
nfcore/mag dev

  • version: 0.1
Latest release: over 3 years ago - 38,524 downloads - 269 dependencies
nfcore/eager 2.5.0

A Docker image for the nf-core/eager pipeline.

  • version: 0.1
Latest release: about 1 year ago - 40,624 downloads - 738 dependencies
nfcore/smrnaseq dev

A Docker container for the nf-core/smrnaseq pipeline.

  • version: 0.1
Latest release: over 3 years ago - 38,754 downloads - 320 dependencies
rocker/r-parallel 1.0.1

  • version: 0.1
Latest release: about 5 years ago - 29,497 downloads - 427 dependencies
tabbzi/terra-dogagingproject-genomic-reports latest

Low-pass sequencing data processing for the Dog Aging Project

  • version: 0.1
Latest release: almost 3 years ago - 32,224 downloads - 664 dependencies
rocker/ml-verse 4.3.2

  • version: 0.1
Latest release: 11 months ago - 34,310 downloads - 1,414 dependencies
broadinstitute/viral-ngs latest

See: https://viral-ngs.readthedocs.io/en/latest/

  • version: 0.1
Latest release: over 4 years ago - 24,573 downloads - 417 dependencies
nfcore/rnafusion fusioninspector_2.8.0dev

A Docker image for the nf-core/rnafusion pipeline.

  • version: 0.1
Latest release: over 2 years ago - 24,036 downloads - 1,302 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 0.1
Latest release: about 1 year ago - 21,613 downloads - 10,962 dependencies
dhspence/docker-genomic-analysis 122121

From Chris Miller's example

  • version: 0.1
Latest release: almost 3 years ago - 19,678 downloads - 1,294 dependencies
fazenda/rsmd 64c1b962-4-14

  • version: 0.1
Latest release: about 2 years ago - 20,306 downloads - 180 dependencies
rocker/cuda 4.3.2

NVIDIA CUDA libraries added to Rocker images

  • version: 0.1
Latest release: 11 months ago - 33,382 downloads - 415 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 0.1
Latest release: over 2 years ago - 13,673 downloads - 11,684 dependencies
ccdlstaging/dr_no_op 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 0.1
Latest release: 12 months ago - 14,674 downloads - 894 dependencies
ashish1981/zreferenceimplementation d17052022

  • version: 0.1
Latest release: over 2 years ago - 14,146 downloads - 1,150 dependencies
ocdr/dkube-datascience-rs-tf-cpu-multiuser v2.6-18

  • version: 0.1
Latest release: over 1 year ago - 13,462 downloads - 747 dependencies
vanallenlab/sv-pipeline filter_gt_029fa3b

  • version: 0.1
Latest release: over 1 year ago - 22,757 downloads - 1,231 dependencies
nfcore/ampliseq dev

A Docker image for nf-core/ampliseq.

  • version: 0.1
Latest release: almost 4 years ago - 10,364 downloads - 331 dependencies
biocontainers/assemblytics v1.0ds-1-deb_cv1

  • version: 0.1
Latest release: over 5 years ago - 9,370 downloads - 632 dependencies
rocker/tensorflow 3.6.1

Tensorflow & Keras libraries for machine learning (CPU version)

  • version: 0.1
Latest release: almost 5 years ago - 12,227 downloads - 534 dependencies
biocontainers/qcumber v1.0.14dfsg-1-deb_cv1

  • version: 0.1
Latest release: over 5 years ago - 9,305 downloads - 689 dependencies
biocontainers/ea-utils v1.1.2dfsg-5-deb_cv1

  • version: 0.1
Latest release: about 5 years ago - 8,456 downloads - 644 dependencies
izone/hadoop ecosystem

Hadoop 2.8.5 Ecosystem fully distributed, Jupyter Notebook, RStudio Server, Julia, jdbc implement

  • version: 0.1
Latest release: about 6 years ago - 7,941 downloads - 2,460 dependencies
hzibraunschweig/sormas-rscript 3.5-5.2022.5

  • version: 0.1
Latest release: over 1 year ago - 7,784 downloads - 1,041 dependencies
biocontainers/trinityrnaseq v2.6.6dfsg-6-deb_cv1

  • version: 0.1
Latest release: about 5 years ago - 7,963 downloads - 831 dependencies
biocontainers/nanook v1.33dfsg-1-deb_cv1

  • version: 0.1
Latest release: about 5 years ago - 7,924 downloads - 733 dependencies
rocker/r-rmd latest

Rocker container for Rmarkdown packages

  • version: 0.1
Latest release: over 4 years ago - 8,177 downloads - 584 dependencies
biocontainers/paleomix v1.2.13.3-1-deb_cv1

  • version: 0.1
Latest release: about 5 years ago - 7,507 downloads - 1,167 dependencies
biocontainers/roary v3.12.0dfsg-2-deb_cv1

  • version: 0.1
Latest release: about 5 years ago - 7,506 downloads - 1,110 dependencies
biocontainers/snakemake v5.4.0-1-deb_cv1

  • version: 0.1
Latest release: about 5 years ago - 7,504 downloads - 710 dependencies
biocontainers/surankco v0.0.r5dfsg-2-deb_cv1

  • version: 0.1
Latest release: about 5 years ago - 7,465 downloads - 857 dependencies
artemklevtsov/r-alpine pkgdev

R docker images based on the alpine:latest

  • version: 0.1
Latest release: over 6 years ago - 7,390 downloads - 124 dependencies
openanalytics/r-shiny latest

Ubuntu 20.04 LTS with R and Shiny

  • version: 0.1
Latest release: about 3 years ago - 7,231 downloads - 1,163 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 0.1
Latest release: over 2 years ago - 6,685 downloads - 12,259 dependencies
ashish1981/s390x-r-shiny latest

  • version: 0.1
Latest release: over 3 years ago - 5,980 downloads - 1,474 dependencies
gesiscss/binder-juliasilge-2dsupervised-2dml-2dcase-2dstudies-2dcourse-1b08b0 eb13b6477d79950a9873e0966bd3aaaa0d043059

  • version: 0.1
Latest release: about 3 years ago - 5,800 downloads - 2,008 dependencies
gesiscss/binder-rubydata-2dbinder-af0da2 b77e1d22eafca6c2ba3a22a8c4ea723b24f7c07e

  • version: 0.1
Latest release: over 3 years ago - 5,337 downloads - 2,109 dependencies
hylleraas/singleuser 27

  • version: 0.1
Latest release: almost 2 years ago - 11,511 downloads - 2,614 dependencies
tabbzi/terra-dogagingproject-data-curation latest

  • version: 0.1
Latest release: over 2 years ago - 9,874 downloads - 706 dependencies
broadinstitute/viral-assemble latest

  • version: 0.1
Latest release: over 4 years ago - 4,464 downloads - 431 dependencies
broadinstitute/viral-phylo 2.0.21.5

  • version: 0.1
Latest release: over 4 years ago - 4,426 downloads - 431 dependencies
mesosphere/mesosphere-data-toolkit latest

  • version: 0.1
Latest release: almost 6 years ago - 4,263 downloads - 1,270 dependencies
kbase/kbase sdkbase.latest

  • version: 0.1
Latest release: over 6 years ago - 4,258 downloads - 2,934 dependencies
nuest/mro 4.0.2

Microsoft R Open, formerly known as Revolution R Open.

  • version: 0.1
Latest release: about 4 years ago - 4,106 downloads - 236 dependencies
biocontainers/imputeme vv1.0.7_cv1

  • version: 0.1
Latest release: about 3 years ago - 3,931 downloads - 1,734 dependencies