Package Usage : cran : BSgenome
Explore the latest package usage data for BSgenome in the cran ecosystem, including detailed information on package dependencies and their usage.
Total dependents: 166
Total downloads: 79,829
Showing first 100 dependents
More details on packages.ecosyste.ms - JSON
btrspg/r-env cache
- version: 1.68.0
biodancer/nasap_performance latest
write later
- version: 1.62.0
eppicenter/mad4hatter sha-cb4911b
- version: 1.68.0
hoonbiolab/hmftools v1.1
- version: 1.60.0
intelliseqngs/bioconductor r-coverage-stats_v0.1
- version: 1.54.0
tariship/dev_sync_directories latest
- version: 1.66.3
nciccbr/ccbr_r_4.3.0 v1
- version: 1.68.0
sviatsidorov/granie_analysis 0.1
Analysis of gliogenesis in a mouse model using GRaNIE
- version: 1.66.3
zymoresearch/bio_resource_builder v1.0
- version: 1.66.3
hoonbiolab/variantannotation_r v1.1
- version: 1.54.0
mattjmeier/r-odaf-hc-prod latest
- version: 1.66.1
jpsmith5/peppro 0.10.2
- version: 1.66.1
brianyee/cropseq-essentials 1.0.0
- version: 1.62.0
omicschef/rnaseqchef v1.1.6
RNAseqChef, an RNA-seq data controller highlighting gene expression features
- version: 1.68.0
biocontainers/bioconductor-gviz v1.18.1-1-deb_cv1
- version: 1.42.0
chgyi/bio 3.5.1
- version: 1.48.0
mfsentma/atacseq latest
- version: 1.62.0
andrewrrelmore/genepi_vscode test
- version: 1.66.3
skchronicles/genome-seek v0.1.0
Official base image of the genome-seek pipeline: https://github.com/OpenOmics/genome-seek
- version: 1.66.3
qdidiscoveryservices/vcfcompare 1.0
- version: 1.68.0
alexthiery/archr 3.1
- version: 1.62.0
smemane20/error_thres_amd_64 latest
- version: 1.68.0
fallingstar10/hbsigrocker latest
- version: 1.68.0
dhspence/docker-manta 1.5.0
- version: 1.48.0
uvarc/rstudio tam5xe
- version: 1.68.0
nciccbr/ccbr_fraser_1.10.2 latest
- version: 1.58.0
almurphy/mungesumstats latest
- version: 1.69.0
mattjmeier/r-odaf-hc latest
Under Development. Containerized version of the R-ODAF Health Canada Pipeline.
- version: 1.66.1
dhspence/docker-rstudio-python latest
- version: 1.66.3
gru4/scan2workinghg38 latest
- version: 1.62.0
crpeters/r-methylkit 4.2.1
- version: 1.66.2
indraniel/chip-pipeline-annotation v1
- version: 1.66.3
khoulaha/shatterseek v1.0.0
- version: 1.58.0
jpsmith5/rpipe 0.3.1
- version: 1.66.1
gru4/scan2fixedhg38 latest
- version: 1.62.0
qdidiscoveryservices/seurat_tidyverse latest
- version: 1.58.0
alexsickler/open-pedcan latest
- version: 1.54.0
sparktx/gviz 1.40.1
- version: 1.64.0
mshriver01/share_task_archr latest
- version: 1.62.0
mattjmeier/r-odaf-hc-base latest
- version: 1.66.1
philipp02/pathway v1
- version: 1.67.1
stormgod/deepmaps-cpu latest
- version: 1.66.3
apollodorus/polyglot v1
- version: 1.66.1
omicschef/epigenomechef v1.1.5
- version: 1.68.0
hoonbiolab/hmftools_purple v3.7.2
- version: 1.66.1
kdgosik/main-gitpod latest
- version: 1.66.3
hoonbiolab/hmftools_snv v3.2.2
- version: 1.66.2
alexthiery/archr_seurat_signac_mega 3.2
- version: 1.62.0
breezykermo/gvis latest
- version: 1.54.0
scwatts/bolt_gpgr 0.1.0
- version: 1.62.0
fgualdr/env_norm_gr_idr latest
- version: 1.66.3
hoonbiolab/testbattenberg v1.0
- version: 1.54.0
hoonbiolab/clustersv v1.1
- version: 1.54.0
andrewsg/archr dev
- version: 1.68.0
muhengliao/r_docker2 genome
- version: 1.58.0
sheddn/bioinformatics-tools latest
- version: 1.62.0
dhspence/docker-hiccompare latest
- version: 1.54.0
elynrfw/gerald-test latest
- version: 1.66.1
kxk302/g4hunter 1.0.0
- version: 1.66.3
hoonbiolab/hmftools_linx v1.23.1
- version: 1.66.2
gesiscss/binder-kozo2-2dsakigakemtg2019-214397 c9d150b74c2eb09683e7fadd99703bda92c291cd
- version: 1.54.0
daltoncp/rstudio_celegansbulksequencing 4.2_3
- version: 1.66.3
compbiocore/lee_isg_erv 20230306
- version: 1.66.3
repbioinfo/transformgampoi latest
- version: 1.62.0
weishwu/nanomethphase 1.2.0
- version: 1.56.0
bakeronit/rstudio_hpc_cancer 0.1.3
rocker-rstudio with some R packages installed in cancer genomic analysis
- version: 1.68.0, 1.66.2
skchronicles/genome-seek_trim_map v0.1.1
Official docker image for trimming and alignment with genome-seek
- version: 1.66.3
qdidiscoveryservices/diffbind latest
- version: 1.68.0
winuthayanon/rstudio 4.3.0
- version: 1.68.0
hoonbiolab/titan v1.1
- version: 1.54.0
mziemann/meth_analysis latest
Based on BioC release 3.14, this image is designed for analysis of infinium methylation array data
- version: 1.62.0
mbaardwijk/hmftools latest
- version: 1.62.0
hoonbiolab/hmftools_sv v.2.13.2
- version: 1.66.2
jmonlong/terra-rstudio-custom 0.0.1
- version: 1.66.2
mdivr/chicago v2
- version: 1.66.3
imegusu/rstudio_rnaseq_all3 latest
RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq
- version: 1.66.3
zjnolen/angsd-snakemake-pipeline 0.1
- version: 1.62.0
ycli1995/bioinfo_dev 1.1.0
- version: 1.68.0
arnstrm2/rstudio 4.3.1
R studio with Bioconductor and snRNAseq packages
- version: 1.68.0
samplix/droplet-viewer-internal latest
- version: 1.60.0
wyangwu/r4.1.2 latest
- version: 1.62.0
luisas/rfasta latest
- version: 1.54.0
weishwu/diffbind 3.6.5
- version: 1.64.0
compbiocore/jupyterhub-docker-images-jh_image 20230524
- version: 1.66.3
alexdhill/complete-seq time
- version: 1.68.0
bioxfu/xseurat2 latest
- version: 1.66.2
haileyzhang/fragpipe-analyst v1.13
A Docker container of Fragpipe-Analyst
- version: 1.66.3
wlc27/dcanr v1
- version: 1.66.2
preethiilumina/diffbind 1.5.1
fixed genome name
- version: 1.66.3
yinxiu/variantalker v2.0
NextFlow pipeline to functionally annotate DNA variants in VCF files
- version: 1.66.3
hoonbiolab/hmftools_cnv v3.8.4
- version: 1.66.2
keithgraham5/cnvrobot_v4_2 latest
- version: 1.54.0
fgualdr/envrperm latest
- version: 1.66.1
gnwanne/decontx latest
- version: 1.66.1
cgrlab/centos7_bfx 1.0.0
- version: 1.66.3
princessmaximacenter/gridss 2.13.2
- version: 1.62.0
cbgr/cager261 1.4
Container for the CAGEr tool version 2.6.1.
- version: 1.68.0