robertplayer/scidap-qiime2 stable

btrspg/r-env cache

genular/base_image 2.0.0

Base image used in PADNORA - https://github.com/genular/pandora

mlepetit/ranalysis 3.3.4

gesiscss/binder-michaellomuscio-2dtidy-2dtext-2dmining-449af9 89b66d682ed8eb4be6eda48e573c7b8a606c7f1e

tariship/dev_sync_directories latest

crukcibioinformatics/sequencingbase 9.5.4

hdsu/etbii2023 latest

mirekphd/ml-cpu-r35-nx devel_fdbf539

nciccbr/ccbr_r_4.3.0 v1

evolomicsmbbt/rna_seq latest

nathanprovin/cellcom 1.2.2

mgggdev/smc latest

rgregstacey/seurat_image 2.1

ipbhalle/biobyte latest

recetox/xmsanalyzer 2.0.6.1-recetox1

mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

qdidiscoveryservices/seurat_cell_annotation latest

tipsarin/kubeflow-rstudio latest

rstudio for kubeflow

ghhenry/curio-seeker-pipeline latest

brianyee/cropseq-essentials 1.0.0

omicschef/rnaseqchef v1.1.6

RNAseqChef, an RNA-seq data controller highlighting gene expression features

commander121/rmarkdown 4.4.0d-b4

koki/bindsc 20220609

uabbds/zebrafish_telencephalon_atlas_app 1.0.0

jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

tercen/faust_operator 0.1.4

bac3/microbiome latest

16S rRNA gene meta-barcoding NGS data analysis app - microbioma batterico. App streamlit.

cgwyx/easymicrobiomer latest

The best practice for microbiome analysis using R

fallingstar10/hbsigrocker latest

denklewer/linseedv2 latest

yamaken37/common_factors_analysis 20230514

alexthiery/schelper seurat-schelper-0.3.5

mlepetit/rnormalisation 1.0.0

chiajungl/scrna-extra 4.4.0-4.4

luisas/rde latest

genular/pandora 2.0.0

PANDORA - https://pandora.atomic-lab.org

atttilacs/dsp_geomxtools latest

andrewatmp/qiime_unzip latest

daltoncp/rstudio_celeganssinglecell 4.2_12

lishuangshuang3/dnbc4dev 2.0.3

luisas/r_sc.simg latest

etycksen/sc_deluxe 0.7

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

qdidiscoveryservices/seurat_tidyverse latest

kaizhang/scatac-bench 0.2.1

gyusikhwang/tgs v1

pennsive/mstools 4.2-amd64

alexsickler/open-pedcan latest

emersonchao/dsc180b latest

qdidiscoveryservices/pipeline_docker-r_and_bioconductor latest

bixbeta/czid v6

updated to https://github.com/chanzuckerberg/czid-cli/releases/tag/v6.0.0

gesiscss/binder-christiankahmann-2dilcm-5fbinder-31aa1b 5f49926dc286efce35ab5d5d196ebb1863b462ae

dzhakparov/geneselectr-image latest

evafastpf/commot 0.1

vgonzenbach/rstudio 4.2

qdidiscoveryservices/flower v3

mikesiwenwu/eversus_benchmarking v7_s3test

mpaltsai/biotextquest_top2vec 27122022

brusconi/seurat new

stormgod/deepmaps-cpu latest

lizzyr/pseudo_ko 1.0.3

weishwu/planet 12052022

biomehub/encodestatsbase 0.0.6

Basic docker image used as a base for EncodeStats.

tercen/tercen_studio_flowsuite 0.0.1

fgualdr/envimpulse latest

ucigenomics/cellchatnotebook 2.1.2

qdidiscoveryservices/pseudobulk 2.0.2

jlphillips/csci 2025-08-08-p2

MTSU Department of Computer Science Stack

cliu97/r4.3_seurat latest

alexthiery/archr_seurat_signac_mega 3.2

msgao/deseq2 latest

bixbeta/pavian v1

zwcdocker/seurat latest

fgualdr/env_norm_gr_idr latest

r2bit/bit-edu-server latest

bit-edu is an open-source scientific and technical education environment built on Docker.

yosuketanigawa/rstudio_yt latest

sheddn/bioinformatics-tools latest

chiajungl/scrna 4.4.0-4.4

koki/crandev 20230814

trust1/shiny v0

crukmi/cytof-browser-lite 1.1.0

sebimer/samba-v4-qiime2 2024.2

luisas/rdeanalysis latest

repbioinfo/transformgampoi latest

bioedge/edge_24_1_ubuntu18 20250922

jingxin/terrascpipe v0

jxprismdocker/test_clincnv latest

koki/sctensor-workshop sha-fa8c4cf

fabianegli/scp-recommendations-2022 1.0

sagemathinc/compute-rlang-arm64 latest

viascientific/rstudio-app-isee 1.0

njjtemp/scrattch-mapping 4.2.0

jackiezhuqi/bio-rstudio latest

dantingz/seurat 1.0.2

winuthayanon/rstudio 4.3.0

markataylor/r_yufree v1.0.0

prangannath/rna_seq latest

Container for EvolOMICS RNA_Seq pipeline

singha53/modc v0.1

sebimer/samba-v4-picrust2 2.5.1