Ecosyste.ms: Docker
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qdidiscoveryservices/ubuntu-1604-pipeline_docker-r_and_bioconductor : latest
Ubuntu 16.04.6 LTS
Latest release: about 4 years ago - 13 downloads - 1,153 dependencies
JSONDependencies
- @PKGNAME@ @PKGVERSION@
- @PKGNAME@ @VERSION@
- ALL 1.28.0
- APAlyzer 1.0.0
- AnnotationDbi 1.48.0
- AnnotationHub 2.18.0
- BH 1.72.0-3
- Biobase 2.46.0
- BiocFileCache 1.10.2
- BiocGenerics 0.32.0
- BiocManager 1.30.10
- BiocNeighbors 1.4.2
- BiocParallel 1.20.1
- BiocVersion 3.10.1
- Biostrings 2.54.0
- Cairo 1.5-12
- ChIPseeker 1.22.1
- ComplexHeatmap 2.2.0
- ConsensusClusterPlus 1.50.0
- DBI 1.1.0
- DESeq2 1.26.0
- DESeq 1.38.0
- DEoptimR 1.0-8
- DO.db 2.9
- DOSE 3.12.0
- DT 0.13
- DelayedArray 0.12.3
- DelayedMatrixStats 1.8.0
- DendSer 1.0.1
- DiscriMiner 0.1-29
- DoubletFinder 2.0.3
- ExperimentHub 1.12.0
- FNN 1.1.3
- Formula 1.2-3
- GGally 2.0.0
- GO.db 3.10.0
- GOSemSim 2.12.1
- GenomeInfoDb 1.22.1
- GenomeInfoDbData 1.2.2
- GenomicAlignments 1.22.1
- GenomicFeatures 1.38.2
- GenomicRanges 1.38.0
- GetoptLong 0.1.8
- GlobalOptions 0.1.1
- HDF5Array 1.14.4
- Hmisc 4.4-0
- IRanges 2.20.2
- KernSmooth 2.23-17
- Lahman 8.0-0
- MASS 7.3-51.6
- Matrix 1.2-18
- MatrixModels 0.4-1
- Nozzle.R1 1.1-1
- PASWR 1.1
- PerformanceAnalytics 2.0.4
- R.cache 0.14.0
- R.devices 2.16.1
- R.methodsS3 1.8.0
- R.oo 1.23.0
- R.rsp 0.43.2
- R.utils 2.9.2
- R6 2.4.1
- RANN 2.6.1
- RColorBrewer 1.1-2
- RCurl 1.98-1.2
- RMySQL 0.10.20
- ROCR 1.0-11
- RPEGLMEN 1.0.1
- RPEIF 1.0.8
- RPESE 1.0.3
- RPostgreSQL 0.6-2
- RSQLite 2.2.0
- RSpectra 0.16-0
- Rcpp 1.0.4.6
- RcppAnnoy 0.0.16
- RcppArmadillo 0.9.900.1.0
- RcppEigen 0.3.3.7.0
- RcppHNSW 0.2.0
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- Rdpack 0.11-1
- RdpackTester 1.0
- Rhdf5lib 1.8.0
- Rhtslib 1.18.1
- RobStatTM 1.0.2
- Rsamtools 2.2.3
- Rsubread 2.0.1
- Rtsne 0.15
- S4Vectors 0.24.4
- Seurat 3.1.5
- SingleR 1.0.6
- SparseM 1.78
- SummarizedExperiment 1.16.1
- TH.data 1.0-10
- TSP 1.1-10
- TTR 0.23-6
- TxDb.Hsapiens.UCSC.hg19.knownGene 3.2.2
- VGAM 1.1-3
- VennDiagram 1.6.20
- XML 3.99-0.3
- XVector 0.26.0
- abind 1.4-5
- acepack 1.4.1
- annotate 1.64.0
- ape 5.4
- askpass 1.1
- assertive.base 0.0-7
- assertive.sets 0.0-3
- assertthat 0.2.1
- backports 1.1.7
- base64enc 0.1-3
- base 3.6.3
- beachmat 2.2.1
- beachtest 1.0.0
- bench 1.1.1
- bibtex 0.4.2.2
- biomaRt 2.42.1
- bit64 0.9-7
- bit 1.1-15.2
- bitops 1.0-6
- blob 1.2.1
- boot 1.3-25
- brew 1.0-6
- broom 0.5.6
- caTools 1.18.0
- callr 3.4.3
- car 3.0-8
- carData 3.0-4
- cellranger 1.1.0
- checkmate 2.0.0
- circlize 0.4.9
- class 7.3-17
- classInt 0.4-3
- cli 2.0.2
- clipr 0.7.0
- clisymbols 1.2.0
- clue 0.3-57
- cluster 2.1.0
- clusterProfiler 3.14.3
- codetools 0.2-16
- colorspace 1.4-1
- commonmark 1.7
- compiler 3.6.3
- corrplot 0.84
- covr 3.5.0
- cowplot 1.0.0
- crayon 1.3.4
- crosstalk 1.1.0.1
- curl 4.3
- cyclocomp 1.1.0
- data.table 1.12.8
- datasets 3.6.3
- dbplyr 1.4.4
- dendextend 1.13.4
- desc 1.2.0
- devtools 2.3.0
- dichromat 2.0-0
- diffobj 0.3.0
- digest 0.6.25
- diptest 0.75-7
- dotCall64 1.0-0
- dplyr 1.0.0
- dqrng 0.2.1
- dygraphs 1.1.1.6
- dynamicTreeCut 1.63-1
- e1071 1.7-3
- edgeR 3.28.1
- egg 0.4.5
- ellipsis 0.3.1
- enrichplot 1.6.1
- europepmc 0.4
- evaluate 0.14
- fansi 0.4.1
- farver 2.0.3
- fastmap 1.0.1
- fastmatch 1.1-0
- feather 0.3.5
- fgsea 1.12.0
- fields 10.3
- fit.models 0.5-14
- fitdistrplus 1.1-1
- flexmix 2.3-15
- foghorn 1.2.1
- fontBitstreamVera 0.1.1
- fontLiberation 0.1.0
- fontquiver 0.2.1
- forcats 0.5.0
- foreach 1.5.0
- foreign 0.8-76
- formatR 1.7
- fpc 2.2-5
- freetypeharfbuzz 0.2.5
- fs 1.4.1
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- knitr 1.28
- labeling 0.3
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- lasso2 1.2-20
- later 1.1.0.1
- lattice 0.20-41
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- logging 0.10-108
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- methods 3.6.3
- mgcv 1.8-31
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- modelr 0.1.8
- modeltools 0.2-23
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