Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : markdown

Explore the latest package usage data for markdown in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 1,009
Total downloads: 47,830,111

More details on packages.ecosyste.ms - JSON

broadinstitute/genomes-in-the-cloud 2.4.0-1501007820

Genomes-in-the-cloud is a genomic analysis pipeline project developed by the Broad Institute.

  • version: 0.8
Latest release: about 7 years ago - 40,948,348 downloads - 951 dependencies
apache/zeppelin 0.11.0

Apache Zeppelin

  • version: 1.1
Latest release: 9 months ago - 3,480,279 downloads - 1,492 dependencies
coala/base pre

A simple docker image featuring coala and it's dependencies.

  • version: 0.8
Latest release: about 7 years ago - 1,940,485 downloads - 1,827 dependencies
dit4c/dit4c-container-qgis latest

DIT4C image for QGIS

  • version: 0.7.7
Latest release: over 7 years ago - 115,438 downloads - 884 dependencies
ashish1981/x86-r-z-appln latest

  • version: 1.1
Latest release: over 3 years ago - 106,632 downloads - 1,150 dependencies
ashish1981/shinyapp-sarb latest

  • version: 1.1
Latest release: over 3 years ago - 91,367 downloads - 1,042 dependencies
ccdlstaging/dr_affymetrix f30409aceba66e19235b21b4ca8899e318e02e30

  • version: 1.1
Latest release: 11 months ago - 92,270 downloads - 1,220 dependencies
rocker/ropensci latest

  • version: 0.8
Latest release: over 6 years ago - 88,618 downloads - 1,589 dependencies
nfcore/atacseq latest

A Docker container for the nf-core/atacseq pipeline.

  • version: 1.1
Latest release: over 2 years ago - 54,429 downloads - 352 dependencies
ashish1981/s390x-r-appln-z latest

  • version: 1.1
Latest release: over 3 years ago - 44,192 downloads - 1,475 dependencies
180a51c0/gh-action-buildapp latest

  • version: 1.1
Latest release: about 4 years ago - 48,804 downloads - 1,987 dependencies
nfcore/mag dev

  • version: 1.0
Latest release: over 3 years ago - 38,524 downloads - 269 dependencies
rocker/ml-verse 4.3.2

  • version: 1.8
Latest release: 9 months ago - 34,310 downloads - 1,414 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 1.8
Latest release: about 1 year ago - 21,613 downloads - 10,962 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 1.1
Latest release: about 2 years ago - 13,673 downloads - 11,684 dependencies
ccdlstaging/dr_no_op 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 1.1
Latest release: 9 months ago - 14,674 downloads - 894 dependencies
ashish1981/zreferenceimplementation d17052022

  • version: 1.1
Latest release: over 2 years ago - 14,146 downloads - 1,150 dependencies
ocdr/dkube-datascience-rs-tf-cpu-multiuser v2.6-18

  • version: 1.1
Latest release: over 1 year ago - 13,462 downloads - 747 dependencies
nfcore/ampliseq dev

A Docker image for nf-core/ampliseq.

  • version: 1.1
Latest release: over 3 years ago - 10,364 downloads - 331 dependencies
biocontainers/assemblytics v1.0ds-1-deb_cv1

  • version: 0.9
Latest release: about 5 years ago - 9,370 downloads - 632 dependencies
rocker/tensorflow 3.6.1

Tensorflow & Keras libraries for machine learning (CPU version)

  • version: 1.1
Latest release: almost 5 years ago - 12,227 downloads - 534 dependencies
biocontainers/qcumber v1.0.14dfsg-1-deb_cv1

  • version: 0.9
Latest release: about 5 years ago - 9,305 downloads - 689 dependencies
biocontainers/ea-utils v1.1.2dfsg-5-deb_cv1

  • version: 0.9
Latest release: about 5 years ago - 8,456 downloads - 644 dependencies
biocontainers/trinityrnaseq v2.6.6dfsg-6-deb_cv1

  • version: 0.9
Latest release: almost 5 years ago - 7,963 downloads - 831 dependencies
biocontainers/nanook v1.33dfsg-1-deb_cv1

  • version: 0.9
Latest release: almost 5 years ago - 7,924 downloads - 733 dependencies
rocker/r-rmd latest

Rocker container for Rmarkdown packages

  • version: 1.1
Latest release: over 4 years ago - 8,177 downloads - 584 dependencies
biocontainers/paleomix v1.2.13.3-1-deb_cv1

  • version: 0.9
Latest release: almost 5 years ago - 7,507 downloads - 1,167 dependencies
biocontainers/roary v3.12.0dfsg-2-deb_cv1

  • version: 0.9
Latest release: almost 5 years ago - 7,506 downloads - 1,110 dependencies
biocontainers/snakemake v5.4.0-1-deb_cv1

  • version: 0.9
Latest release: almost 5 years ago - 7,504 downloads - 710 dependencies
biocontainers/surankco v0.0.r5dfsg-2-deb_cv1

  • version: 0.9
Latest release: almost 5 years ago - 7,465 downloads - 857 dependencies
artemklevtsov/r-alpine pkgdev

R docker images based on the alpine:latest

  • version: 0.8
Latest release: over 6 years ago - 7,390 downloads - 124 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 1.1
Latest release: over 2 years ago - 6,685 downloads - 12,259 dependencies
ashish1981/s390x-r-shiny latest

  • version: 1.1
Latest release: over 3 years ago - 5,980 downloads - 1,474 dependencies
gesiscss/binder-juliasilge-2dsupervised-2dml-2dcase-2dstudies-2dcourse-1b08b0 eb13b6477d79950a9873e0966bd3aaaa0d043059

  • version: 1.1
Latest release: about 3 years ago - 5,800 downloads - 2,008 dependencies
gesiscss/binder-rubydata-2dbinder-af0da2 b77e1d22eafca6c2ba3a22a8c4ea723b24f7c07e

  • version: 1.1
Latest release: over 3 years ago - 5,337 downloads - 2,109 dependencies
mesosphere/mesosphere-data-toolkit latest

  • version: 0.9
Latest release: over 5 years ago - 4,263 downloads - 1,270 dependencies
biocontainers/imputeme vv1.0.7_cv1

  • version: 1.1
Latest release: almost 3 years ago - 3,931 downloads - 1,734 dependencies
biocontainers/isee-galaxy v3.13_cv1.0.0

  • version: 1.1
Latest release: almost 3 years ago - 3,660 downloads - 1,218 dependencies
rocker/ml-gpu 3.6.0

Deprecated. see rocker/ml for modern GPU-enabled builds.

  • version: 1.0
Latest release: almost 5 years ago - 3,524 downloads - 843 dependencies
nfcore/epitopeprediction dev

A docker image for nf-core/epitopeprediction

  • version: 1.1
Latest release: over 3 years ago - 3,914 downloads - 205 dependencies
ccdlstaging/dr_smasher 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 1.1
Latest release: 9 months ago - 4,929 downloads - 884 dependencies
qdidiscoveryservices/ms_pipeline latest

  • version: 1.1
Latest release: over 3 years ago - 3,040 downloads - 1,044 dependencies
ocdr/dkube-datascience-rs-sk-cpu-multiuser v1.1.1-tiji-test

  • version: 1.1
Latest release: about 2 years ago - 3,480 downloads - 751 dependencies
ocdr/dkube-datascience-rs-tf-cpu v2.0.0-tiji-test

  • version: 1.1
Latest release: about 2 years ago - 3,001 downloads - 722 dependencies
ashish1981/s390x-clefos-shiny latest

  • version: 1.1
Latest release: over 3 years ago - 2,992 downloads - 1,467 dependencies
ccdlstaging/dr_illumina 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 1.1
Latest release: 9 months ago - 3,448 downloads - 893 dependencies
ocdr/dkube-datascience-rs-pytorch-cpu-multiuser v1.9-18

  • version: 1.1
Latest release: over 1 year ago - 3,150 downloads - 747 dependencies
conoria/alpine-r-bookdown latest

Dockerfile based on conoria/alpine-pandoc adding R and bookdown

  • version: 1.1
Latest release: over 4 years ago - 2,856 downloads - 41 dependencies
ocdr/dkube-datascience-rs-tf-gpu-multiuser v2.6-18

  • version: 1.1
Latest release: over 1 year ago - 2,777 downloads - 841 dependencies
rocker/tensorflow-gpu 3.6.0

DEPRECATED. Please use `rocker/ml` instead

  • version: 1.0
Latest release: almost 5 years ago - 2,657 downloads - 591 dependencies
ashish1981/x86-rbase-shiny-plumber d300422

  • version: 1.1
Latest release: over 2 years ago - 2,623 downloads - 955 dependencies
gesiscss/binder-serhatcevikel-2dbdm-5f2019-e7b363 1239175be24a02ff0e1bcd30f865011dc1fca7d4

  • version: 1.1
Latest release: almost 4 years ago - 2,479 downloads - 2,536 dependencies
bgruening/docker-jupyter-notebook latest

Jupyter running in a docker container. This image can be used to integrate Jupyter into Galaxy

  • version: 1.1
Latest release: over 3 years ago - 2,533 downloads - 1,920 dependencies
snoopycrimecop/training-notebooks master_merge_daily

A set of Python Notebooks to demonstrate how to access the images and metadata from OMERO

  • version: 1.1
Latest release: about 3 years ago - 2,250 downloads - 2,866 dependencies
broadinstitute/terra-jupyter-gatk 8444561

  • version: 1.1
Latest release: over 4 years ago - 2,239 downloads - 3,913 dependencies
mesosphere/mesosphere-jupyter-service latest

  • version: 0.9
Latest release: over 5 years ago - 2,176 downloads - 2,835 dependencies
dragonflyscience/niwaverse 2020-08-11

  • version: 1.1
Latest release: about 4 years ago - 1,787 downloads - 1,445 dependencies
ccdlstaging/dr_compendia 549216c6fa7f6c80a5d78287c8814330f150428c

  • version: 1.1
Latest release: 9 months ago - 2,332 downloads - 877 dependencies
rocker/cuda-dev 3.6.1

Adds CUDA and cudnn development libraries to rocker stack

  • version: 1.1
Latest release: almost 5 years ago - 1,775 downloads - 581 dependencies
tercen/dartrusttidy travis-17

  • version: 1.1
Latest release: over 3 years ago - 1,434 downloads - 700 dependencies
gesiscss/binder-gesiscss-2ddata-5fscience-5fimage-117abb 49e91d93b12b6234447e34bd3a289a833841a4e8

  • version: 1.1
Latest release: about 3 years ago - 1,335 downloads - 1,885 dependencies
gesiscss/binder-palmoreck-2ddockerfiles-2dfor-2dbinder-f98a72 e6751152f3669d7fa6b0892ed229918a75b153df

  • version: 1.1
Latest release: about 3 years ago - 1,231 downloads - 2,152 dependencies
dragonflyscience/dragonverse-18.04 latest

  • version: 1.1
Latest release: over 2 years ago - 1,227 downloads - 1,440 dependencies
afcai2c/r-studio-eda 20230130il5

R Studio with Exploritory Data Analysis AI/ML packages installed

  • version: 1.1
Latest release: over 1 year ago - 1,131 downloads - 702 dependencies
nfcore/neutronstar latest

A Docker Container for nf-core/neutronstar

  • version: 1.1
Latest release: about 4 years ago - 1,306 downloads - 253 dependencies
kbase/narrprereq 1.3

Narrative prerequisite base image (used by kbase/narrabase).

  • version: 0.8
Latest release: over 6 years ago - 1,055 downloads - 1,383 dependencies
kbase/metrics latest

  • version: 0.9
Latest release: about 3 years ago - 1,027 downloads - 973 dependencies
ocdr/dkube-datascience-rs-tf-gpu v2.0.0-tiji-test

  • version: 1.1
Latest release: about 2 years ago - 1,025 downloads - 1,011 dependencies
nfcore/airrflowreport dev

  • version: 1.5
Latest release: over 1 year ago - 994 downloads - 409 dependencies
dragonflyscience/sharknado 2023-07-23

  • version: 1.1
Latest release: about 1 year ago - 1,298 downloads - 2,516 dependencies
recetox/retip 0.5.4-recetox4

Retention Time prediction for metabolomics

  • version: 1.1
Latest release: over 3 years ago - 977 downloads - 524 dependencies
biocontainers/ipo develop

A Tool for automated Optimization of XCMS Parameters

  • version: 0.8
Latest release: over 6 years ago - 957 downloads - 366 dependencies
kbase/errorlogging develop

  • version: 0.9
Latest release: almost 4 years ago - 948 downloads - 973 dependencies
nfcore/circrna dev

Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.

  • version: 1.1
Latest release: almost 2 years ago - 1,202 downloads - 654 dependencies
afcai2c/python-r-ai latest

Image with Python and R packages

  • version: 1.1
Latest release: about 2 years ago - 851 downloads - 851 dependencies
gesiscss/binder-lmartinoty-2dlmartinoty-e3b0bd c626ad4bba1c566a8af5d745f4386d02e9fe9b44

  • version: 1.0
Latest release: almost 4 years ago - 829 downloads - 2,085 dependencies
tercen/runtime-r40 4.0.4-6

  • version: 1.1
Latest release: almost 2 years ago - 877 downloads - 639 dependencies
sourcegraph/codeintel-r insiders

  • version: 0.8
Latest release: almost 6 years ago - 64,477 downloads - 352 dependencies
nfcore/slamseq dev

A docker image for nf-core/slamseq

  • version: 1.1
Latest release: over 3 years ago - 25,614 downloads - 354 dependencies
nfcore/scrnaseq dev

A Docker Container for the nf-core/scrnaseq pipeline.

  • version: 1.1
Latest release: over 3 years ago - 7,707 downloads - 423 dependencies
intelliseqngs/task_vcf-uniq 1.0.0

  • version: 1.1
Latest release: about 4 years ago - 2,118 downloads - 806 dependencies
hoonbiolab/cellranger v1.0

  • version: 1.1
Latest release: almost 3 years ago - 919 downloads - 682 dependencies
dg520/rsimple 1.1

  • version: 1.4
Latest release: over 1 year ago - 777 downloads - 403 dependencies
mirekphd/ml-cpu-r35-rs 20190201

  • version: 0.9
Latest release: over 5 years ago - 762 downloads - 9,716 dependencies
lucifer001/custom-rs-tf-multiuser gpu

  • version: 1.1
Latest release: over 3 years ago - 949 downloads - 807 dependencies
dhspence/docker-homer latest

docker with chip-seq tool homer

  • version: 0.8
Latest release: almost 6 years ago - 702 downloads - 606 dependencies
tercen/runtime-r35 3.5.3-7

  • version: 0.9
Latest release: over 2 years ago - 700 downloads - 563 dependencies
davidspek/kubeflow-datascience-notebook kale-dev-0.0.1

This image contains the regular jupyter/datascience-notebook edited for it to work in kubeflow.

  • version: 1.1
Latest release: almost 4 years ago - 680 downloads - 2,114 dependencies
nfcore/lncpipe dev

A Docker image for nf-core/lncpipe

  • version: 0.8
Latest release: almost 6 years ago - 1,141 downloads - 413 dependencies
gesiscss/singleuser-orc r2d-49e91d9

  • version: 1.1
Latest release: over 4 years ago - 660 downloads - 1,900 dependencies
afcai2c/r-studio-dl latest

R Studio with Deep Learning AI/ML packages installed [builds upon jlab-eda]

  • version: 1.1
Latest release: about 2 years ago - 635 downloads - 1,650 dependencies
gesiscss/binder-matjesg-2dais-5f2019-df9f9f c588d97bc20b1345ea549a5260d2ec36137e911b

  • version: 0.9
Latest release: over 4 years ago - 630 downloads - 2,075 dependencies
afcai2c/r-studio rebuild

Basic installation of R Studio.

  • version: 1.1
Latest release: almost 2 years ago - 594 downloads - 740 dependencies