Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : Formula

Explore the latest package usage data for Formula in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 401
Total downloads: 42,146,509

More details on packages.ecosyste.ms - JSON

broadinstitute/genomes-in-the-cloud 2.4.0-1501007820

Genomes-in-the-cloud is a genomic analysis pipeline project developed by the Broad Institute.

  • version: 1.2-2
Latest release: over 7 years ago - 40,948,348 downloads - 951 dependencies
veupathdb/rserve 7

  • version: 1.2-5
Latest release: 12 months ago - 624,940 downloads - 550 dependencies
rocker/ropensci latest

  • version: 1.2-3
Latest release: over 6 years ago - 88,618 downloads - 1,589 dependencies
nfcore/atacseq latest

A Docker container for the nf-core/atacseq pipeline.

  • version: 1.2-4
Latest release: over 2 years ago - 54,429 downloads - 352 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 1.2-5
Latest release: about 1 year ago - 21,613 downloads - 10,962 dependencies
dhspence/docker-genomic-analysis 122121

From Chris Miller's example

  • version: 1.2-4
Latest release: almost 3 years ago - 19,678 downloads - 1,294 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 1.2-4
Latest release: over 2 years ago - 13,673 downloads - 11,684 dependencies
biocontainers/ea-utils v1.1.2dfsg-5-deb_cv1

  • version: 1.2-3
Latest release: about 5 years ago - 8,456 downloads - 644 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 1.2-4
Latest release: over 2 years ago - 6,685 downloads - 12,259 dependencies
kbase/kbase sdkbase.latest

  • version: 1.2-1
Latest release: over 6 years ago - 4,258 downloads - 2,934 dependencies
patroonorg/patroondeps latest

  • version: 1.2-5
Latest release: over 1 year ago - 2,754 downloads - 1,677 dependencies
alligatorcompany/acs-exasol 8.23.0.1

exasol docker image with additional checks

  • version: 1.2-4
Latest release: about 1 year ago - 2,029 downloads - 2,085 dependencies
broadinstitute/fungal_gatk4 latest

  • version: 1.2-4
Latest release: almost 3 years ago - 16,447 downloads - 942 dependencies
afcai2c/r-studio-eda 20230130il5

R Studio with Exploritory Data Analysis AI/ML packages installed

  • version: 1.2-4
Latest release: almost 2 years ago - 1,131 downloads - 702 dependencies
recetox/retip 0.5.4-recetox4

Retention Time prediction for metabolomics

  • version: 1.2-4
Latest release: over 3 years ago - 977 downloads - 524 dependencies
biocontainers/ipo develop

A Tool for automated Optimization of XCMS Parameters

  • version: 1.2-3
Latest release: over 6 years ago - 957 downloads - 366 dependencies
nfcore/circrna dev

Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.

  • version: 1.2-4
Latest release: about 2 years ago - 1,202 downloads - 654 dependencies
afcai2c/python-r-ai latest

Image with Python and R packages

  • version: 1.2-4
Latest release: over 2 years ago - 851 downloads - 851 dependencies
nfcore/slamseq dev

A docker image for nf-core/slamseq

  • version: 1.2-3
Latest release: over 3 years ago - 25,614 downloads - 354 dependencies
mirekphd/ml-cpu-r35-rs 20190201

  • version: 1.2-3
Latest release: almost 6 years ago - 762 downloads - 9,716 dependencies
prismcmap/depmap_versions dd55695d58fb

  • version: 1.2-4
Latest release: 11 months ago - 1,452 downloads - 633 dependencies
dhspence/docker-homer latest

docker with chip-seq tool homer

  • version: 1.2-3
Latest release: almost 6 years ago - 702 downloads - 606 dependencies
nfcore/lncpipe dev

A Docker image for nf-core/lncpipe

  • version: 1.2-3
Latest release: almost 6 years ago - 1,141 downloads - 413 dependencies
afcai2c/r-studio-dl latest

R Studio with Deep Learning AI/ML packages installed [builds upon jlab-eda]

  • version: 1.2-4
Latest release: over 2 years ago - 635 downloads - 1,650 dependencies
ctomlins/mblast latest

  • version: 1.2-4
Latest release: about 2 years ago - 631 downloads - 399 dependencies
gene110/nipt_report latest

  • version: 1.2-4
Latest release: over 3 years ago - 785 downloads - 676 dependencies
kbase/kbase_base latest

KBase Base Image containing Core services and runtime

  • version: 1.2-1
Latest release: about 8 years ago - 510 downloads - 3,106 dependencies
afcai2c/r-shiny pc22

R Shiniy - Build interactive web applications that can execute R code

  • version: 1.2-4
Latest release: about 2 years ago - 492 downloads - 1,748 dependencies
kbase/sdkbase latest

  • version: 1.2-1
Latest release: almost 8 years ago - 476 downloads - 2,934 dependencies
gesiscss/binder-pablobernabeu-2dmodality-2dswitch-2deffects-2demerge-2dearly-2dand-2dincrease-2dthroughout-2dconceptual-2dprocessing-e2667d 3173ddce2b5cc44e37c810c654f4cc84c147c45b

  • version: 1.2-3
Latest release: over 3 years ago - 452 downloads - 2,029 dependencies
prismcmap/drc-module robust_DRC

  • version: 1.2-4
Latest release: over 1 year ago - 539 downloads - 647 dependencies
dhspence/docker-sicer latest

  • version: 1.2-3
Latest release: almost 6 years ago - 765 downloads - 1,147 dependencies
tercen/operator_base 1.0.5

  • version: 1.2-1
Latest release: almost 6 years ago - 393 downloads - 699 dependencies
prismcmap/norm-module 26be7aa8ab48

  • version: 1.2-4
Latest release: almost 2 years ago - 380 downloads - 633 dependencies
cristaniguti/onemap_git 2.8.0

R package to build linkage map for outcrossing, F2, backcross and RILs populations

  • version: 1.2-3
Latest release: over 2 years ago - 363 downloads - 1,581 dependencies
kraigerl95/jupyternotebook-r stable

Jupyter Notebook wiht personal changes

  • version: 1.2-5
Latest release: almost 2 years ago - 703 downloads - 1,903 dependencies
dhspence/docker-basestation latest

  • version: 1.2-3
Latest release: over 5 years ago - 308 downloads - 1,132 dependencies
qdidiscoveryservices/py3_cellranger 6.1.2

  • version: 1.2-3
Latest release: about 3 years ago - 302 downloads - 1,375 dependencies
dragonflyscience/kakapodock 2022-02-01

  • version: 1.2-4
Latest release: almost 3 years ago - 476 downloads - 2,314 dependencies
mirekphd/ml-cpu-r35-jnb devel_2b2752c

  • version: 1.2-3
Latest release: over 6 years ago - 271 downloads - 9,222 dependencies
dhspence/docker-dss latest

  • version: 1.2-3
Latest release: over 4 years ago - 367 downloads - 1,127 dependencies
biocontainers/bioconductor-cummerbund v2.16.0-2-deb_cv1

  • version: 1.2-1
Latest release: over 6 years ago - 502 downloads - 576 dependencies
biocontainers/bioconductor-biovizbase v1.22.0-2-deb_cv1

  • version: 1.2-1
Latest release: over 6 years ago - 477 downloads - 568 dependencies
nuest/tidyverse-versioned 3.4.1

...

  • version: 1.2-2
Latest release: about 5 years ago - 227 downloads - 488 dependencies
nuest/verse-versioned latest

...

  • version: 1.2-1
Latest release: over 7 years ago - 191 downloads - 740 dependencies
prismcmap/sushi develop

  • version: 1.2-4
Latest release: 10 months ago - 221 downloads - 723 dependencies
biocontainers/bioconductor-gviz v1.18.1-1-deb_cv1

  • version: 1.2-1
Latest release: over 6 years ago - 156 downloads - 572 dependencies
chgyi/bio 3.5.1

  • version: 1.2-3
Latest release: about 6 years ago - 158 downloads - 1,077 dependencies
canaantt/notitia-ocpu latest

This is part of zager/notitia.

  • version: 1.2-2
Latest release: almost 7 years ago - 153 downloads - 633 dependencies
biocontainers/bioconductor-deseq2 v1.14.1-1-deb_cv1

  • version: 1.2-1
Latest release: over 6 years ago - 155 downloads - 523 dependencies
nuest/reproducible-research-at-giscience latest

  • version: 1.2-3
Latest release: over 3 years ago - 139 downloads - 1,132 dependencies
chgyi/metaware_rna_denovo latest

  • version: 1.2-3
Latest release: over 5 years ago - 132 downloads - 2,095 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 1.2-3
Latest release: over 6 years ago - 134 downloads - 9,302 dependencies
dragonflyscience/dragonfly-reports-14.04 latest

Docker for generating Dragonfly reports, based on Ubuntu 14.04, with texlive and selected R packages

  • version: 1.2-1
Latest release: about 8 years ago - 125 downloads - 773 dependencies
dhspence/docker-manta 1.5.0

  • version: 1.2-3
Latest release: almost 6 years ago - 126 downloads - 1,191 dependencies
andrewosh/rootbinder latest

  • version: 1.2-1
Latest release: over 8 years ago - 116 downloads - 956 dependencies
recetox/xmsannotator latest

  • version: 1.2-3
Latest release: over 3 years ago - 113 downloads - 448 dependencies
dhspence/docker-hiccompare latest

  • version: 1.2-3
Latest release: over 3 years ago - 113 downloads - 1,271 dependencies
peterdjames/r_base_with_packs_incl_rkdb r-base

  • version: 1.2-4
Latest release: almost 2 years ago - 614 downloads - 1,721 dependencies
gesiscss/orc-example-binder-christiankahmann-2ddata-5fscience-5fimage-836e2b eb06582d6eaa521a59193ffbfc55c0a0a3eaa886

  • version: 1.2-3
Latest release: almost 5 years ago - 109 downloads - 2,792 dependencies
kcapd/wings-genomics latest

WINGS workflow system with software for genomics operations.

  • version: 1.2-3
Latest release: about 4 years ago - 103 downloads - 1,468 dependencies
recetox/recetox-xmsannotator october-conda0

  • version: 1.2-4
Latest release: about 3 years ago - 95 downloads - 484 dependencies
mirekphd/ml-cpu-r35-rdp 20180918

  • version: 1.2-3
Latest release: about 6 years ago - 93 downloads - 9,486 dependencies
jafoltz/scclassify latest

  • version: 1.2-4
Latest release: almost 2 years ago - 90 downloads - 1,079 dependencies
testalabgh/downstream signac-1.4.0

  • version: 1.2-4
Latest release: over 1 year ago - 485 downloads - 3,517 dependencies
scottcame/tidyverse-mariadb latest

  • version: 1.2-3
Latest release: over 6 years ago - 73 downloads - 183 dependencies
gesiscss/binder-tlbbd-2dspring2018-2dlab-5f10-b89db5 85cb00a8af28ec9af53e79e947b0f4ff648544a6

  • version: 1.2-2
Latest release: almost 5 years ago - 67 downloads - 279 dependencies
vanessa/rstudio-neuro latest

Dockerized rstudio with some statistics and neuro packages!

  • version: 1.2-2
Latest release: almost 7 years ago - 66 downloads - 199 dependencies
xyzzpwn/r-base latest

  • version: 1.2-3
Latest release: over 4 years ago - 64 downloads - 376 dependencies
evolbioinfo/mapdamage v2.2.1

  • version: 1.2-4
Latest release: almost 4 years ago - 68 downloads - 615 dependencies
rapporteket/noric-base-r latest

  • version: 1.2-4
Latest release: over 3 years ago - 61 downloads - 1,425 dependencies
gesiscss/binder-statomics-2dsga2019-4a5361 1c74d6b57a18a85f98e3380f8356a4a6b5413520

  • version: 1.2-3
Latest release: almost 5 years ago - 55 downloads - 1,313 dependencies
tipsarin/rstudio 4.1.3viraltrack

  • version: 1.2-4
Latest release: almost 2 years ago - 54 downloads - 981 dependencies
ctomlins/metablast2 latest

  • version: 1.2-4
Latest release: about 2 years ago - 54 downloads - 422 dependencies
dhspence/docker-vep 93

  • version: 1.2-3
Latest release: over 5 years ago - 53 downloads - 1,191 dependencies
mirekphd/ml-cpu-r35-guac devel_6f33d1e

  • version: 1.2-3
Latest release: over 6 years ago - 54 downloads - 8,551 dependencies
vnmd/afni_20.2.13 latest

  • version: 1.2-3
Latest release: over 4 years ago - 53 downloads - 906 dependencies
doejgi/trinityrnaseq-wdl 2.11.0b

  • version: 1.2-3
Latest release: over 1 year ago - 331 downloads - 980 dependencies
gesiscss/binder-tlbbd-2dsp2018-2dlab-5f10-9db2c2 85cb00a8af28ec9af53e79e947b0f4ff648544a6

  • version: 1.2-2
Latest release: almost 5 years ago - 45 downloads - 638 dependencies
gesiscss/binder-christiankahmann-2ddata-5fscience-5fimage-836e2b eb06582d6eaa521a59193ffbfc55c0a0a3eaa886

  • version: 1.2-3
Latest release: almost 5 years ago - 46 downloads - 2,792 dependencies
vanessa/mandalas latest

generate beautiful colored mandalas with R

  • version: 1.2-2
Latest release: over 6 years ago - 44 downloads - 503 dependencies
afcai2c/r-studio-valex latest

  • version: 1.2-4
Latest release: over 3 years ago - 42 downloads - 1,654 dependencies
mbwali/jupyterlab qiime2023

  • version: 1.2-5
Latest release: over 1 year ago - 56 downloads - 1,941 dependencies
mirekphd/ml-gpu-r35-cuda90 devel_00b4e38

  • version: 1.2-3
Latest release: over 6 years ago - 42 downloads - 9,405 dependencies
qdidiscoveryservices/batch_correction latest

  • version: 1.2-4
Latest release: almost 4 years ago - 40 downloads - 790 dependencies
gesiscss/binder-tlbbd-2dspring2018-2dlab-5f01-2282c8 5269efa938a9cdcb0ed1c3f032b44329e58c84ba

  • version: 1.2-2
Latest release: almost 5 years ago - 40 downloads - 600 dependencies
broadcptacdev/panoply_so_nmf_report 9bb503e

  • version: 1.2-4
Latest release: over 1 year ago - 95 downloads - 725 dependencies
vnmd/afni_20.3.00 latest

  • version: 1.2-3
Latest release: about 4 years ago - 40 downloads - 914 dependencies
scottcame/dw-sf-demo-loader latest

Image to support a demonstration of syncing salesforce data to data.world

  • version: 1.2-2
Latest release: almost 6 years ago - 38 downloads - 502 dependencies
gesiscss/binder-tlbbd-2dspring2018-2dlab-5f03-666af7 7f548fca8d136939e10410662702a657b66a9f9c

  • version: 1.2-2
Latest release: almost 5 years ago - 37 downloads - 597 dependencies
vanessa/seurat latest

  • version: 1.2-3
Latest release: over 6 years ago - 35 downloads - 475 dependencies
kcapd/wings-genomics-full latest

  • version: 1.2-3
Latest release: almost 4 years ago - 33 downloads - 1,502 dependencies
mirekphd/ml-cpu-r36-rs 20200131

  • version: 1.2-3
Latest release: almost 5 years ago - 34 downloads - 10,669 dependencies
scottcame/australia-federal-2016 latest

  • version: 1.2-3
Latest release: over 6 years ago - 33 downloads - 504 dependencies
bryanfisk/capybara latest

  • version: 1.2-4
Latest release: almost 2 years ago - 35 downloads - 1,067 dependencies
biocontainers/ecomet phenomenal-v1.1_cv0.3.39

  • version: 1.2-2
Latest release: over 6 years ago - 32 downloads - 647 dependencies
vnmd/rstudio_1.4.1106 latest

  • version: 1.2-4
Latest release: about 3 years ago - 36 downloads - 2,238 dependencies