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Package Usage : cran : AnnotationHub

Explore the latest package usage data for AnnotationHub in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 86
Total downloads: 131,323
Showing first 100 dependents

More details on packages.ecosyste.ms - JSON

qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 3.2.2
Latest release: about 2 years ago - 4,362 downloads - 1,464 dependencies
biodancer/nasap_performance latest

write later

  • version: 3.2.0
Latest release: almost 3 years ago - 83 downloads - 2,006 dependencies
intelliseqngs/bioconductor r-coverage-stats_v0.1

  • version: 2.18.0
Latest release: almost 6 years ago - 22 downloads - 185 dependencies
scgfacility/rstudio-course22 v0.11

image used to run the course 2022

  • version: 3.6.0
Latest release: almost 3 years ago - 149 downloads - 382 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 3.8.0
Latest release: over 2 years ago - 155 downloads - 679 dependencies
payne6861/stereonote_non_conda_scmerge_seurat_harmony_batchelor_cca v1.0.0

stereonote_non_conda_scmerge_seurat_harmony_batchelor_cca

  • version: 3.2.2
Latest release: almost 3 years ago - 22 downloads - 1,943 dependencies
koki/velocytor 20221015

  • version: 3.4.0
Latest release: about 3 years ago - 62 downloads - 1,452 dependencies
koki/workflow 20210327

  • version: 2.22.0
Latest release: over 4 years ago - 67 downloads - 1,265 dependencies
jpsmith5/peppro 0.10.2

  • version: 3.6.0
Latest release: almost 3 years ago - 82 downloads - 1,163 dependencies
sagnikbanerjee15/ngpint 1.0.0

  • version: 3.3.6
Latest release: almost 4 years ago - 44 downloads - 2,335 dependencies
biocontainers/bioconductor-gviz v1.18.1-1-deb_cv1

  • version: 2.6.4
Latest release: over 7 years ago - 165 downloads - 572 dependencies
chgyi/bio 3.5.1

  • version: 2.12.1
Latest release: about 7 years ago - 661 downloads - 1,077 dependencies
biocontainers/bioconductor-annotationhub v2.6.4-1-deb_cv1

  • version: 2.6.4
Latest release: over 7 years ago - 152 downloads - 459 dependencies
fallingstar10/hbsigrocker latest

  • version: 3.8.0
Latest release: over 2 years ago - 256 downloads - 1,223 dependencies
jpsmith5/rpipe 0.3.1

  • version: 3.6.0
Latest release: almost 3 years ago - 69 downloads - 262 dependencies
etycksen/sc_deluxe 0.7

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

  • version: 3.6.0
Latest release: 6 months ago - 2,648 downloads - 757 dependencies
gyusikhwang/tgs v1

  • version: 3.2.2
Latest release: over 2 years ago - 57 downloads - 1,095 dependencies
alexsickler/open-pedcan latest

  • version: 2.18.0
Latest release: almost 3 years ago - 219 downloads - 864 dependencies
philipp02/pathway v1

  • version: 3.7.0
Latest release: almost 3 years ago - 34 downloads - 345 dependencies
brusconi/seurat new

  • version: 3.8.0
Latest release: over 1 year ago - 146 downloads - 536 dependencies
stormgod/deepmaps-cpu latest

  • version: 3.6.0
Latest release: over 2 years ago - 96 downloads - 1,710 dependencies
sameetmehta/docker_report_apptainer devel

  • version: 3.8.0
Latest release: over 2 years ago - 21 downloads - 352 dependencies
am5747/methylation latest

  • version: 3.6.0
Latest release: almost 3 years ago - 31 downloads - 290 dependencies
nfancy/scflow 0.7.4

  • version: 3.6.0
Latest release: over 1 year ago - 300 downloads - 778 dependencies
crukmi/liana 0.1.9

  • version: 3.6.0
Latest release: almost 3 years ago - 34 downloads - 287 dependencies
mhettich0years/r-images v1.1.2

  • version: 3.6.0
Latest release: almost 3 years ago - 77 downloads - 334 dependencies
yosuketanigawa/rstudio_yt latest

  • version: 3.4.0
Latest release: over 2 years ago - 207 downloads - 2,089 dependencies
muhengliao/r_docker2 genome

  • version: 2.22.0
Latest release: over 1 year ago - 346 downloads - 515 dependencies
compbiocore/dscov_sct 20221201

  • version: 3.6.0
Latest release: almost 3 years ago - 44 downloads - 1,031 dependencies
gesiscss/binder-kozo2-2dsakigakemtg2019-214397 c9d150b74c2eb09683e7fadd99703bda92c291cd

  • version: 2.18.0
Latest release: almost 6 years ago - 16 downloads - 2,128 dependencies
almahmoud/terra-jupyter bioc

  • version: 3.4.0
Latest release: almost 3 years ago - 73 downloads - 2,217 dependencies
daltoncp/rstudio_celegansbulksequencing 4.2_3

  • version: 3.6.0
Latest release: over 2 years ago - 60 downloads - 1,562 dependencies
compbiocore/lee_isg_erv 20230306

  • version: 3.6.0
Latest release: over 2 years ago - 13 downloads - 1,038 dependencies
jenfisher7/rstudio_sbae latest

  • version: 3.6.0
Latest release: almost 3 years ago - 30 downloads - 1,604 dependencies
bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

  • version: 3.8.0
Latest release: about 2 years ago - 110 downloads - 1,150 dependencies
koki/sctensor-workshop sha-fa8c4cf

  • version: 3.1.6
Latest release: about 4 years ago - 200 downloads - 2,087 dependencies
dsouzd04/himc_zellkonverter 1.6.5

  • version: 3.4.0
Latest release: almost 3 years ago - 86 downloads - 953 dependencies
mziemann/meth_analysis latest

Based on BioC release 3.14, this image is designed for analysis of infinium methylation array data

  • version: 3.2.2
Latest release: over 2 years ago - 9 downloads - 1,347 dependencies
singha53/modc v0.1

  • version: 3.2.2
Latest release: over 2 years ago - 35 downloads - 783 dependencies
crukmi/liana_tensor2 0.1.9

  • version: 3.6.0
Latest release: almost 3 years ago - 21 downloads - 684 dependencies
shl198/rna_ppl latest

  • version: 3.4.0
Latest release: almost 3 years ago - 24 downloads - 2,099 dependencies
mdivr/chicago v2

  • version: 3.6.0
Latest release: over 2 years ago - 45 downloads - 645 dependencies
ycli1995/bioinfo_dev 1.1.0

  • version: 3.8.0
Latest release: over 1 year ago - 185 downloads - 4,337 dependencies
chaunceyzhou/awesome_rnaseq v2.0

  • version: 2.18.0
Latest release: over 1 year ago - 83 downloads - 465 dependencies
ucigenomics/spatiallibd latest

  • version: 3.6.0
Latest release: almost 3 years ago - 27 downloads - 2,006 dependencies
wyangwu/r4.1.2 latest

  • version: 3.2.2
Latest release: over 2 years ago - 93 downloads - 827 dependencies
compbiocore/jupyterhub-docker-images-jh_image 20230524

  • version: 3.6.0
Latest release: over 2 years ago - 139 downloads - 3,115 dependencies
haileyzhang/fragpipe-analyst v1.13

A Docker container of Fragpipe-Analyst

  • version: 3.6.0
Latest release: 6 months ago - 263 downloads - 1,511 dependencies
wlc27/dcanr v1

  • version: 3.6.0
Latest release: almost 3 years ago - 82 downloads - 1,681 dependencies
bianca7/mompreprocess latest

  • version: 3.9.1
Latest release: over 2 years ago - 415 downloads - 1,340 dependencies
rayne233/lcms latest

  • version: 3.2.2
Latest release: over 2 years ago - 82 downloads - 658 dependencies
vidhyagnanasekaran/rocker-single-cell v1

  • version: 3.6.0
Latest release: almost 3 years ago - 35 downloads - 886 dependencies
bianca7/clusterprofiler latest

  • version: 3.9.2
Latest release: over 2 years ago - 55 downloads - 1,315 dependencies
mapostolides/test12345 latest

  • version: 2.18.0
Latest release: over 2 years ago - 12 downloads - 566 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 2.10.1
Latest release: over 3 years ago - 18,717 downloads - 11,684 dependencies
qdidiscoveryservices/ubuntu-1604-pipeline_docker-r_and_bioconductor latest

  • version: 2.18.0
Latest release: about 5 years ago - 13 downloads - 1,153 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 2.10.1
Latest release: over 3 years ago - 10,241 downloads - 12,259 dependencies
scao/microsec 0.0.1

  • version: 3.6.0
Latest release: almost 3 years ago - 6,029 downloads - 507 dependencies
biocontainers/isee-galaxy v3.13_cv1.0.0

  • version: 3.1.3
Latest release: about 4 years ago - 3,692 downloads - 1,218 dependencies
broadinstitute/terra-jupyter-aou 2.1.13

  • version: 3.6.0
Latest release: almost 3 years ago - 96,770 downloads - 4,112 dependencies
koki/rstudio_mesh latest

  • version: 3.3.6
Latest release: almost 4 years ago - 239 downloads - 1,389 dependencies
koki/annotationhub 20210323

  • version: 2.22.0
Latest release: over 4 years ago - 128 downloads - 1,250 dependencies
gesiscss/binder-statomics-2dsga2019-4a5361 1c74d6b57a18a85f98e3380f8356a4a6b5413520

  • version: 2.18.0
Latest release: almost 6 years ago - 69 downloads - 1,313 dependencies
koki/tensor-projects-machima 20220827

  • version: 3.4.0
Latest release: about 3 years ago - 120 downloads - 1,441 dependencies
hoonbiolab/pepatac v1.1

  • version: 3.0.1
Latest release: about 4 years ago - 70 downloads - 1,213 dependencies
cmccornack/crmsc latest

  • version: 3.2.2
Latest release: over 2 years ago - 407 downloads - 1,476 dependencies
mirekphd/ml-cpu-r36-rs 20200131

  • version: 2.10.1
Latest release: almost 6 years ago - 68 downloads - 10,669 dependencies
etretiakov/workbench-session-complete jammy-2024.09.19-custom-12.9

  • version: 3.8.0
Latest release: about 1 year ago - 1,187 downloads - 6,961 dependencies
ericsalomaki/rnaseq_r4_2 latest

  • version: 3.6.0
Latest release: almost 3 years ago - 49 downloads - 989 dependencies
mirekphd/ml-cpu-r35-rdp 20180918

  • version: 2.12.1
Latest release: about 7 years ago - 312 downloads - 9,486 dependencies
mirekphd/ml-cpu-r35-rs 20190201

  • version: 2.12.1
Latest release: almost 7 years ago - 1,669 downloads - 9,716 dependencies
kisudsoe/r-base latest

  • version: 3.6.0
Latest release: over 2 years ago - 127 downloads - 1,107 dependencies
chunjiesamliu/scmocha latest

  • version: 3.8.0
Latest release: over 2 years ago - 72 downloads - 1,258 dependencies
denghb001/centos v1.1

  • version: 3.6.0
Latest release: over 2 years ago - 21 downloads - 1,193 dependencies
crukmi/liana_tensor 0.1.9

  • version: 3.6.0
Latest release: almost 3 years ago - 27 downloads - 467 dependencies
etretiakov/rocker-session latest

  • version: 3.8.0
Latest release: over 2 years ago - 78 downloads - 2,565 dependencies
almahmoud/shiny-iseehub anvil

  • version: 3.9.1
Latest release: over 2 years ago - 42 downloads - 1,591 dependencies
joshuatobin257/drop latest

  • version: 3.8.0
Latest release: about 2 years ago - 16 downloads - 840 dependencies
kuglerf/tft_r v5

  • version: 3.6.0
Latest release: about 2 years ago - 26 downloads - 812 dependencies
biocontainers/bioconductor-cummerbund v2.16.0-2-deb_cv1

  • version: 2.6.4
Latest release: over 7 years ago - 543 downloads - 576 dependencies
biocontainers/bioconductor-ensembldb v1.6.2-1-deb_cv1

  • version: 2.6.4
Latest release: over 7 years ago - 534 downloads - 498 dependencies
biocontainers/bioconductor-biovizbase v1.22.0-2-deb_cv1

  • version: 2.6.4
Latest release: over 7 years ago - 528 downloads - 568 dependencies
qdidiscoveryservices/py3_cellranger 6.1.2

  • version: 2.20.0
Latest release: about 4 years ago - 343 downloads - 1,375 dependencies
bioconductor/ismb.osca 124cbc0

  • version: 3.8.0
Latest release: over 2 years ago - 697 downloads - 1,422 dependencies
qdidiscoveryservices/scrna_downstream 1.1

  • version: 3.0.2
Latest release: almost 4 years ago - 434 downloads - 1,716 dependencies
koki/sctensor-experiments 20220208

  • version: 3.2.1
Latest release: almost 4 years ago - 295 downloads - 2,071 dependencies
koki/biocdev 20230818

  • version: 3.9.1
Latest release: over 2 years ago - 313 downloads - 1,504 dependencies