Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

qdidiscoveryservices/scrna_downstream : 1.1

Latest release: about 3 years ago - 424 downloads - 1,716 dependencies

Dependencies

@PKGNAME@ @VERSION@
AnnotationDbi 1.54.1
AnnotationHub 3.0.2
BH 1.75.0-0
Biobase 2.52.0
BiocFileCache 2.0.0
BiocGenerics 0.38.0
BiocIO 1.2.0
BiocManager 1.30.16
BiocNeighbors 1.10.0
BiocParallel 1.26.2
BiocSingular 1.8.1
BiocVersion 3.13.1
Biostrings 2.60.2
DBI 1.1.1
DDRTree 0.1.5
DESeq2 1.32.0
DT 0.20
DelayedArray 0.18.0
DelayedMatrixStats 1.14.3
DoubletFinder 2.0.3
DropletUtils 1.12.3
ExperimentHub 2.0.0
FNN 1.1.3
GenomeInfoDb 1.28.4
GenomeInfoDbData 1.2.6
GenomicRanges 1.44.0
HDF5Array 1.20.0
HSMMSingleCell 1.12.0
IRanges 2.26.0
KEGGREST 1.32.0
KernSmooth 2.23-20
MASS 7.3-54
MAST 1.18.0
Matrix 1.3-3
MatrixGenerics 1.4.3
MatrixModels 0.5-0
R.methodsS3 1.8.1
R.oo 1.24.0
R.utils 2.11.0
R6 2.5.1
RANN 2.6.1
RBGL 1.68.0
RColorBrewer 1.1-2
RCurl 1.98-1.5
ROCR 1.0-11
RSQLite 2.2.8
RSpectra 0.16-0
RUnit 0.4.32
Rcpp 1.0.7
RcppAnnoy 0.0.19
RcppArmadillo 0.10.7.0.0
RcppEigen 0.3.3.9.1
RcppGSL 0.3.10
RcppGSLExample 0.0.3
RcppHNSW 0.3.0
RcppProgress 0.4.2
RcppProgressArmadillo 0.2
RcppProgressETA 0.1
RcppProgressExample 0.2
RcppZiggurat 0.1.6
Rdpack 2.1.2
RdpackTester 1.0
Rfast2 0.1.1
Rfast 2.0.3
Rhdf5lib 1.14.2
Rtsne 0.15
S4Vectors 0.30.2
ScaledMatrix 1.0.0
Seurat 4.0.5
SeuratDisk 0.0.0.9019
SeuratObject 4.0.2
SingleCellExperiment 1.14.1
SingleR 1.6.1
SparseM 1.81
SummarizedExperiment 1.22.0
TFisher 0.2.0
TH.data 1.1-0
VGAM 1.1-5
XML 3.99-0.8
XVector 0.32.0
abind 1.4-5
annotate 1.70.0
ape 5.5
askpass 1.1
assertthat 0.2.1
backports 1.4.1
base64enc 0.1-3
base 4.1.0
beachmat 2.8.1
beachtest 1.0.0
biocViews 1.60.0
bit64 4.0.5
bit 4.0.4
bitops 1.0-7
blob 1.2.2
boot 1.3-28
brew 1.0-6
brio 1.1.3
broom 0.7.11
bslib 0.3.1
caTools 1.18.2
cachem 1.0.6
callr 3.7.0
celldex 1.2.0
cellranger 1.1.0
class 7.3-19
cli 3.1.1
clipr 0.7.1
cluster 2.1.2
codetools 0.2-18
colorspace 2.0-2
combinat 0.0-8
commonmark 1.7
compiler 4.1.0
conquer 1.0.2
covr 3.5.1
cowplot 1.1.1
cpp11 0.4.0
crayon 1.4.2
crosstalk 1.1.1
curl 4.3.2
data.table 1.14.2
datasets 4.1.0
dbplyr 2.1.1
deldir 1.0-5
densityClust 0.3
desc 1.4.0
diffobj 0.3.5
digest 0.6.29
docopt 0.7.1
dotCall64 1.0-1
dplyr 1.0.7
dqrng 0.3.0
dtplyr 1.2.1
edgeR 3.34.1
ellipsis 0.3.2
enrichR 3.0
evaluate 0.14
fansi 1.0.2
farver 2.1.0
fastICA 1.2-3
fastmap 1.1.0
feather 0.3.5
fields 13.3
filelock 1.0.2
fitdistrplus 1.1-6
fontawesome 0.2.2
forcats 0.5.1
foreign 0.8-81
formatR 1.11
fs 1.5.0
futile.logger 1.4.3
futile.options 1.0.1
future.apply 1.8.1
future 1.22.1
gargle 1.2.0
genefilter 1.74.1
geneplotter 1.70.0
generics 0.1.0
ggplot2 3.3.5
ggrepel 0.9.1
ggridges 0.5.3
git2r 0.29.0
globals 0.14.0
glue 1.6.1
goftest 1.2-3
googledrive 2.0.0
googlesheets4 1.0.0
gplots 3.1.1
grDevices 4.1.0
graph 1.70.0
graphics 4.1.0
grid 4.1.0
gridExtra 2.3
gtable 0.3.0
gtools 3.9.2
haven 2.4.3
hdf5r 1.3.4
here 1.0.1
highr 0.9
hms 1.1.1
htmltools 0.5.2
htmlwidgets 1.5.4
httpuv 1.6.3
httr 1.4.2
ica 1.0-2
ids 1.0.1
igraph 1.2.7
interactiveDisplayBase 1.30.0
irlba 2.3.3
isoband 0.2.5
jquerylib 0.1.4
jsonlite 1.7.2
kernlab 0.9-29
knitr 1.37
labeling 0.4.2
lambda.r 1.2.4
later 1.3.0
lattice 0.20-44
lazyeval 0.2.2
leiden 0.3.9
lifecycle 1.0.1
limma 3.48.3
listenv 0.8.0
littler 0.3.13
lmtest 0.9-38
locfit 1.5-9.4
lubridate 1.8.0
magrittr 2.0.1
maps 3.4.0
mathjaxr 1.4-0
matrixStats 0.61.0
memoise 2.0.0
metap 1.5
methods 4.1.0
mgcv 1.8-35
mime 0.12
miniUI 0.1.1.1
mixtools 1.2.0
mnormt 2.0.2
mockery 0.4.2
modelr 0.1.8
monocle 2.20.0
morebeach 1.0.0
morebeachtests 1.0.0
multcomp 1.4-17
multtest 2.48.0
munsell 0.5.0
mutoss 0.1-12
mvtnorm 1.1-3
mvtnormAPI 1.0-0
nlme 3.1-152
nnet 7.3-16
numDeriv 2016.8-1.1
openssl 1.4.5
org.testing.db 0.1
parallel 4.1.0
parallelly 1.28.1
patchwork 1.1.1
pbapply 1.5-0
pheatmap 1.0.12
pillar 1.6.5
pingr 2.0.1
pkgbuild 1.3.1
pkgconfig 2.0.3
pkgload 1.2.4
plogr 0.2.0
plotly 4.10.0
plotrix 3.8-2
plyr 1.8.6
png 0.1-7
polyclip 1.10-0
praise 1.0.0
prettyunits 1.1.1
processx 3.5.2
progress 1.2.2
promises 1.2.0.1
proxy 0.4-26
ps 1.6.0
purrr 0.3.4
qlcMatrix 0.9.7
quantreg 5.86
rappdirs 0.3.3
rbibutils 2.2.4
readr 2.1.1
readxl 1.3.1
rematch2 2.1.2
rematch 1.0.1
remotes 2.4.2
reprex 2.0.1
reshape2 1.4.4
restfulr 0.0.13
reticulate 1.22
rex 1.2.1
rhdf5 2.36.0
rhdf5filters 1.4.0
rjson 0.2.20
rlang 0.4.12
rmarkdown 2.11
rpart 4.1-15
rprojroot 2.0.2
rstudioapi 0.13
rsvd 1.0.5
rvest 1.0.2
sandwich 3.0-1
sass 0.4.0
scales 1.1.1
scattermore 0.7
sctransform 0.3.2
scuttle 1.2.1
segmented 1.3-4
selectr 0.4-2
shiny 1.7.1
sitmo 2.0.2
slam 0.1-48
sn 2.0.0
snow 0.4-3
sourcetools 0.1.7
spam 2.8-0
sparseMatrixStats 1.4.2
sparsesvd 0.2
spatial 7.3-14
spatstat.core 2.3-0
spatstat.data 2.1-0
spatstat.geom 2.3-0
spatstat.sparse 2.0-0
spatstat.utils 2.2-0
splines 4.1.0
stats4 4.1.0
stats 4.1.0
stringi 1.7.5
stringr 1.4.0
survival 3.2-11
sys 3.4
tcltk 4.1.0
tensor 1.5
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.2
tibble 3.1.6
tidyr 1.1.4
tidyselect 1.1.1
tidyverse 1.3.1
tinytex 0.36
tmvnsim 1.0-2
tools 4.1.0
translations 4.1.0
tzdb 0.2.0
utf8 1.2.2
utils 4.1.0
uuid 1.0-3
uwot 0.1.10
vctrs 0.3.8
viridis 0.6.2
viridisLite 0.4.0
vroom 1.5.7
waldo 0.3.1
webfakes 1.1.3
withr 2.4.3
xfun 0.29
xml2 1.3.3
xtable 1.8-4
yaml 2.2.1
zlibbioc 1.38.0
zoo 1.8-9

bash 5.0.17