atingupta2005/rocker_tidyverse latest

genular/base_image 2.0.0

Base image used in PADNORA - https://github.com/genular/pandora

mlepetit/ranalysis 3.3.4

yosuketanigawa/rocker-geospatial-seurat latest

Docker image of Seurat installed on R Studio

cheyne0328/rstudio zxy

mirekphd/ml-cpu-r35-nx devel_fdbf539

nciccbr/ccbr_r_4.3.0 v1

evolomicsmbbt/rna_seq latest

nathanprovin/cellcom 1.2.2

rgregstacey/seurat_image 2.1

mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

brianyee/cropseq-essentials 1.0.0

bpimages/pcalg 2.7-8-arm64

chgyi/bio 3.5.1

commander121/rmarkdown 4.4.0d-b4

jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

bpimages/benchpress 2.1.0

bpimages/bidag 2.1.4

BiDAG R package

mlepetit/rnormalisation 1.0.0

chiajungl/scrna-extra 4.4.0-4.4

genular/pandora 2.0.0

PANDORA - https://pandora.atomic-lab.org

stefanucciluca/tregopathies latest

etycksen/sc_deluxe 0.7

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

kaizhang/scatac-bench 0.2.1

bixbeta/czid v6

updated to https://github.com/chanzuckerberg/czid-cli/releases/tag/v6.0.0

estat/batchchange 13-01-2023-182746

dzhakparov/geneselectr-image latest

vgonzenbach/rstudio 4.2

mikesiwenwu/eversus_benchmarking v7_s3test

mpaltsai/biotextquest_top2vec 27122022

stormgod/deepmaps-cpu latest

biomehub/encodestatsbase 0.0.6

Basic docker image used as a base for EncodeStats.

qdidiscoveryservices/pseudobulk 2.0.2

msgao/deseq2 latest

bixbeta/pavian v1

r2bit/bit-edu-server latest

bit-edu is an open-source scientific and technical education environment built on Docker.

yosuketanigawa/rstudio_yt latest

sheddn/bioinformatics-tools latest

chiajungl/scrna 4.4.0-4.4

repbioinfo/transformgampoi latest

bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

gene110/nipt_combinereport_wcx v0

sagemathinc/compute-rlang-arm64 latest

dsouzd04/himc_zellkonverter 1.6.5

keithomayot/nlp_ins metronic

winuthayanon/rstudio 4.3.0

markataylor/r_yufree v1.0.0

prangannath/rna_seq latest

Container for EvolOMICS RNA_Seq pipeline

bioinformaticsmusc/ploidy-ngs latest

onceltuca/itgobnilp latest

vnmd/rstudio_2022.07.2 latest

ruben6um/satijalab_seurat_slingshot_muscat_harmony_glmgampoi_svglite latest

ycli1995/bioinfo_dev 1.1.0

peeyushweav/weav_c5_flask v1.0.22

vasilkor/shiny-verse 1.0.19

compbiocore/jupyterhub-docker-images-jh_image 20230524

dongminshin/sc_ppl 1.71

bioxfu/xseurat2 latest

wlc27/dcanr v1

chiajungl/seurat 4.4.0-4.4

apollodorus/genentech-jp v1

movano/python9with_r v2

maschroder/atlantgisbackend latest

robertplayer/scidap-genelists v5.0.0

ghost525/rstudio test

rstudio image using rserver

fallingstar10/gmadeomicsrocker tiny

igrisch/seuratharmony latest

estat/skuanalysisallcontry 05-02-2024-140401

todzhu/monocle latest

estat/rdc301-upload 08-12-2023-083956

nandhinis08/projectathon6-miracum1-step2-hamburg-debug latest

alkoenig08/harmonyseurat latest

Docker container built on satijalab/seurat with Broad Institute's "Harmony" package installed.

winuthayanon/seurat 4.3.0

mirekphd/ml-cpu-r40-rs-cust 20230912

mirekphd/ml-cpu-r36-rs-cust latest

biocontainers/oncocnv v7.0_cv2

bigomics/omicsplayground v3.5.24

Self-service analytics for big omics data

mirekphd/ml-cpu-r36-base latest

felioxx/geosoft-ii_rservice latest

kaiwenw/gpytorch-10_0 latest

tamaraperteghella/r4_hormonit latest

cplaisier/ccafv2_extra latest

bixbeta/cluster_profiler v1

gaosdocker/cdt 20230703

peterjansson/appnuc 0.8.0

Applied nuclear physics relevant software, containerized.

estat/strategicstock 06-11-2024-184419

onceltuca/vioss_diffan fd83d01

sheddn/singlecell latest

pego/dowhy-examples-notebooks-deps latest

bigomics/omicsplayground-base ub2204_v4

mirekphd/ml-cpu-r35-guac devel_6f33d1e

johnjun094/scgsea 0.3.11

DockerFile for benchmarking ssGSEA for single-cell RNA-seq

mirekphd/ml-gpu-r35-cuda90 devel_00b4e38