Data

Tools

Indexes

Applications

Experiments

Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : segmented

Explore the latest package usage data for segmented in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 119
Total downloads: 153,980

More details on packages.ecosyste.ms - JSON

rocker/ropensci 3.4.1

  • version: 0.5-3.0
Latest release: almost 8 years ago - 88,799 downloads - 1,589 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 1.6-4
Latest release: almost 2 years ago - 28,089 downloads - 10,962 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 1.6-0
Latest release: about 3 years ago - 17,819 downloads - 11,684 dependencies
biocontainers/smalr v1.1dfsg-2-deb_cv1

  • version: 0.5-3.0
Latest release: almost 6 years ago - 7,780 downloads - 551 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 1.6-0
Latest release: about 3 years ago - 9,814 downloads - 12,259 dependencies
nfcore/bcellmagic 1.2.0

A preliminary container for the bcellmagic pipeline

  • version: 1.1-0
Latest release: over 5 years ago - 2,690 downloads - 298 dependencies
nfcore/airrflowreport dev

  • version: 1.6-2
Latest release: over 2 years ago - 1,011 downloads - 409 dependencies
nfcore/proteomicslfq 1.0.0

A Docker Container for label free quantification for proteomics data.

  • version: 1.4-0
Latest release: almost 5 years ago - 5,609 downloads - 1,124 dependencies
mirekphd/ml-cpu-r35-rs 20190201

  • version: 0.5-3.0
Latest release: over 6 years ago - 1,359 downloads - 9,716 dependencies
mirekphd/ml-cpu-r35-jnb devel_2b2752c

  • version: 0.5-3.0
Latest release: about 7 years ago - 364 downloads - 9,222 dependencies
qdidiscoveryservices/scrna_downstream 1.1

  • version: 1.3-4
Latest release: over 3 years ago - 426 downloads - 1,716 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 0.5-3.0
Latest release: about 7 years ago - 357 downloads - 9,302 dependencies
mirekphd/ml-cpu-r35-rdp 20180918

  • version: 0.5-3.0
Latest release: almost 7 years ago - 230 downloads - 9,486 dependencies
jafoltz/scclassify latest

  • version: 1.4-0
Latest release: over 2 years ago - 94 downloads - 1,079 dependencies
veitveit/viqor latest

  • version: 1.6-2
Latest release: over 3 years ago - 134 downloads - 1,141 dependencies
mlepetit/ranalysis 3.3.4

  • version: 1.3-4
Latest release: over 2 years ago - 221 downloads - 2,131 dependencies
koki/tensor-project-plasmids 20211014

  • version: 1.3-4
Latest release: almost 4 years ago - 79 downloads - 1,169 dependencies
mirekphd/ml-cpu-r35-guac devel_6f33d1e

  • version: 0.5-3.0
Latest release: about 7 years ago - 136 downloads - 8,551 dependencies
chriswyatt/perl_r_e1071 latest

  • version: 1.3-4
Latest release: over 3 years ago - 73 downloads - 268 dependencies
mirekphd/ml-gpu-r35-cuda90 devel_00b4e38

  • version: 0.5-3.0
Latest release: about 7 years ago - 76 downloads - 9,405 dependencies
broadcptacdev/panoply_so_nmf_report 9bb503e

  • version: 1.3-1
Latest release: over 2 years ago - 107 downloads - 725 dependencies
vanessa/seurat latest

  • version: 0.5-3.0
Latest release: about 7 years ago - 47 downloads - 475 dependencies
mirekphd/ml-cpu-r36-rs 20200131

  • version: 1.1-0
Latest release: over 5 years ago - 68 downloads - 10,669 dependencies
bryanfisk/capybara latest

  • version: 1.4-0
Latest release: over 2 years ago - 48 downloads - 1,067 dependencies
mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

  • version: 0.5-3.0
Latest release: about 7 years ago - 40 downloads - 9,414 dependencies
evolbioinfo/treewas v1.0

A phylogenetic tree-based approach to genome-wide association studies in microbes

  • version: 0.5-4.0
Latest release: about 6 years ago - 34 downloads - 858 dependencies
hoonbiolab/lohhla v1.1

  • version: 1.3-4
Latest release: almost 4 years ago - 70 downloads - 708 dependencies
alanocallaghan/high-dimensional-stats-r latest

  • version: 1.6-2
Latest release: over 2 years ago - 106 downloads - 1,601 dependencies
gesiscss/binder-ssnn-2dairr-2drepcred-9e07f7 e68c2846fb6fd48559d9bb9c191b4e9389b2bccf

  • version: 1.1-0
Latest release: over 5 years ago - 44 downloads - 2,091 dependencies
luisas/rfasta latest

  • version: 1.2-0
Latest release: almost 5 years ago - 27 downloads - 501 dependencies
mlepetit/rnormalisation 1.0.0

  • version: 1.3-4
Latest release: over 2 years ago - 61 downloads - 2,142 dependencies
etretiakov/workbench-session-complete jammy-2024.09.19-custom-12.9

  • version: 1.6-4
Latest release: 10 months ago - 861 downloads - 6,961 dependencies
gnwanne/decontx latest

  • version: 1.6-2
Latest release: over 2 years ago - 49 downloads - 938 dependencies
broadcptacdev/activedriver latest

  • version: 1.3-1
Latest release: over 2 years ago - 91 downloads - 720 dependencies
cjha15/dockerfile BC

  • version: 1.6-4
Latest release: almost 2 years ago - 143 downloads - 488 dependencies
bioconductor/ismb.osca 124cbc0

  • version: 1.6-4
Latest release: about 2 years ago - 603 downloads - 1,422 dependencies
alexthiery/seurat-monocle 0.1

  • version: 1.6-4
Latest release: over 2 years ago - 62 downloads - 1,062 dependencies
koki/tensor-projects-plasmids 20211018

  • version: 1.3-4
Latest release: almost 4 years ago - 22 downloads - 1,152 dependencies
abelean/seurat_azimuth 5.0.1

  • version: 1.5-0
Latest release: over 1 year ago - 1,367 downloads - 1,141 dependencies
daemontus/workspace-daemontus-science latest

  • version: 1.6-4
Latest release: over 2 years ago - 64 downloads - 2,728 dependencies
markataylor/r_yufree v1.0.0

  • version: 1.6-1
Latest release: over 2 years ago - 27 downloads - 1,514 dependencies
bixbeta/czid v6

updated to https://github.com/chanzuckerberg/czid-cli/releases/tag/v6.0.0

  • version: 1.3-1
Latest release: 12 months ago - 39 downloads - 421 dependencies
stormgod/deepmaps-cpu latest

  • version: 1.6-2
Latest release: over 2 years ago - 67 downloads - 1,710 dependencies
ruben6um/satijalab_seurat_slingshot_muscat_harmony_glmgampoi_svglite latest

  • version: 1.3-3
Latest release: over 2 years ago - 44 downloads - 406 dependencies
bixbeta/cluster_profiler v1

  • version: 1.3-1
Latest release: over 2 years ago - 17 downloads - 1,038 dependencies
gmillot/immcantation_v1.1 gitlab_v10.0

https://gitlab.pasteur.fr/gmillot/dockerfiles/-/tree/v10.0

  • version: 1.3-4
Latest release: over 2 years ago - 25 downloads - 1,438 dependencies
daltoncp/rstudio_celeganssinglecell 4.2_12

  • version: 1.6-2
Latest release: almost 2 years ago - 224 downloads - 529 dependencies
dsouzd04/himc_zellkonverter 1.6.5

  • version: 1.6-0
Latest release: over 2 years ago - 63 downloads - 953 dependencies
gmillot/r_v4.1.2_ig_clustering_v1.1 gitlab_v9.7

https://gitlab.pasteur.fr/gmillot/dockerfiles/-/tree/v9.7

  • version: 1.6-0
Latest release: over 2 years ago - 31 downloads - 927 dependencies
alkoenig08/harmonyseurat latest

Docker container built on satijalab/seurat with Broad Institute's "Harmony" package installed.

  • version: 1.6-2
Latest release: about 2 years ago - 79 downloads - 931 dependencies
apollodorus/genentech-jp v1

  • version: 1.4-0
Latest release: over 2 years ago - 45 downloads - 1,947 dependencies
bixbeta/pavian v1

  • version: 1.3-1
Latest release: over 2 years ago - 14 downloads - 388 dependencies
compbiocore/dscov_sct 20221201

  • version: 1.6-0
Latest release: over 2 years ago - 32 downloads - 1,031 dependencies
yosuketanigawa/rocker-geospatial-seurat latest

Docker image of Seurat installed on R Studio

  • version: 1.6-2
Latest release: over 2 years ago - 120 downloads - 512 dependencies
daltoncp/rstudio_celegansbulksequencing 4.2_3

  • version: 1.6-4
Latest release: almost 2 years ago - 52 downloads - 1,562 dependencies
sludock/sludock18august latest

  • version: 1.6-0
Latest release: almost 3 years ago - 16 downloads - 1,078 dependencies
ntobias85/abe_repo rbuild_reports_1.0.1

  • version: 1.6-2
Latest release: about 1 year ago - 60 downloads - 1,339 dependencies
mfsentma/rna latest

  • version: 1.6-0
Latest release: over 2 years ago - 12 downloads - 807 dependencies
gmillot/r_v4.1.2_ig_clustering_v1.2 gitlab_v9.8

https://gitlab.pasteur.fr/gmillot/dockerfiles/-/tree/v9.8

  • version: 1.6-0
Latest release: over 2 years ago - 17 downloads - 928 dependencies
madhavsub/rstudio latestseurat

  • version: 1.6-2
Latest release: over 2 years ago - 36 downloads - 774 dependencies
oatsybob/nwisguishiny 2

  • version: 1.6-4
Latest release: about 2 years ago - 28 downloads - 998 dependencies
compbiocore/jupyterhub-docker-images-jh_image 20230524

  • version: 1.6-4
Latest release: about 2 years ago - 101 downloads - 3,115 dependencies
wlc27/dcanr v1

  • version: 1.6-2
Latest release: over 2 years ago - 63 downloads - 1,681 dependencies
chiajungl/seurat 4.4.0-4.4

  • version: 1.6-4
Latest release: about 1 year ago - 114 downloads - 1,249 dependencies
fgualdr/env_perm_motifs latest

  • version: 1.6-4
Latest release: about 2 years ago - 31 downloads - 584 dependencies
archang/seurat-zellk latest

  • version: 1.6-2
Latest release: about 2 years ago - 16 downloads - 935 dependencies
winuthayanon/seurat 4.3.0

  • version: 1.6-4
Latest release: about 2 years ago - 266 downloads - 2,660 dependencies
matzieb/shiny-4.0.3-seurat4-spatial latest

  • version: 1.6-4
Latest release: about 2 years ago - 19 downloads - 1,061 dependencies
cgwyx/easymicrobiomer latest

The best practice for microbiome analysis using R

  • version: 1.6-4
Latest release: about 2 years ago - 44 downloads - 1,604 dependencies
rayne233/lcms latest

  • version: 1.6-4
Latest release: about 2 years ago - 82 downloads - 658 dependencies
fallingstar10/gmadeomicsrocker tiny

  • version: 1.6-4
Latest release: over 1 year ago - 74 downloads - 1,224 dependencies
fgualdr/env_motifs latest

  • version: 1.6-4
Latest release: about 2 years ago - 28 downloads - 544 dependencies
kuangda/pc12 latest

  • version: 1.6-2
Latest release: over 2 years ago - 36 downloads - 1,326 dependencies
abelean/seurat_desctools 4.1.0

  • version: 1.5-0
Latest release: over 2 years ago - 800 downloads - 1,090 dependencies
johnjun094/scgsea 0.3.11

DockerFile for benchmarking ssGSEA for single-cell RNA-seq

  • version: 1.3-4
Latest release: almost 2 years ago - 507 downloads - 924 dependencies
jesusgf23/allenseurat latest

  • version: 1.6-4
Latest release: over 2 years ago - 371 downloads - 933 dependencies
chiajungl/smk-scrna-extra 4.3-7.30-4.3

  • version: 1.6-4
Latest release: about 2 years ago - 265 downloads - 1,384 dependencies
cmccornack/crmsc latest

  • version: 1.4-0
Latest release: about 2 years ago - 374 downloads - 1,476 dependencies
chiajungl/scrna-extra 4.4.0-4.4

  • version: 1.6-4
Latest release: about 1 year ago - 676 downloads - 1,350 dependencies
qdidiscoveryservices/sclite_generate_clean_osprj v1.2

  • version: 1.6-4
Latest release: over 1 year ago - 470 downloads - 890 dependencies
pipecraft/vsearch_dada2 0

  • version: 1.6-4
Latest release: over 1 year ago - 462 downloads - 785 dependencies
mesti90/ecoli_hgt_all_in 1.1

  • version: 1.6-2
Latest release: almost 2 years ago - 232 downloads - 1,148 dependencies
astrand/testinvpath abc

  • version: 1.6-4
Latest release: almost 2 years ago - 157 downloads - 972 dependencies
tariship/dev_sync_directories latest

  • version: 1.6-4
Latest release: almost 2 years ago - 245 downloads - 421 dependencies
nathanprovin/cellcom 1.2.2

  • version: 1.6-4
Latest release: almost 2 years ago - 146 downloads - 596 dependencies
broadcptacdev/activedriver_mimp latest

  • version: 1.6-2
Latest release: over 2 years ago - 74 downloads - 374 dependencies
stefanucciluca/tregopathies latest

  • version: 1.6-4
Latest release: almost 2 years ago - 86 downloads - 488 dependencies
broadcptac/panoply_so_nmf_sankey_report DEV

  • version: 1.3-1
Latest release: about 2 years ago - 66 downloads - 383 dependencies
bioxfu/xseurat2 latest

  • version: 1.6-2
Latest release: over 2 years ago - 63 downloads - 982 dependencies
robertplayer/scidap-genelists v5.0.0

  • version: 1.5-0
Latest release: 11 months ago - 374 downloads - 609 dependencies
chunjiesamliu/scmocha latest

  • version: 1.6-4
Latest release: almost 2 years ago - 67 downloads - 1,258 dependencies
karinaguo/pkg_test RRwf2_v23

  • version: 1.6-4
Latest release: almost 2 years ago - 280 downloads - 337 dependencies
yosuketanigawa/rstudio_yt latest

  • version: 1.6-2
Latest release: about 2 years ago - 166 downloads - 2,089 dependencies
chiajungl/scrna 4.4.0-4.4

  • version: 1.6-4
Latest release: about 1 year ago - 94 downloads - 1,312 dependencies