Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : monocle

Explore the latest package usage data for monocle in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 46
Total downloads: 15,022

More details on packages.ecosyste.ms - JSON

qdidiscoveryservices/scrna_downstream 1.1

  • version: 2.20.0
Latest release: almost 3 years ago - 354 downloads - 1,716 dependencies
jafoltz/scclassify latest

  • version: 2.22.0
Latest release: almost 2 years ago - 90 downloads - 1,079 dependencies
mlepetit/ranalysis 3.3.4

  • version: 2.20.0
Latest release: about 2 years ago - 79 downloads - 2,131 dependencies
bryanfisk/capybara latest

  • version: 2.22.0
Latest release: almost 2 years ago - 35 downloads - 1,067 dependencies
mlepetit/rnormalisation 1.0

  • version: 2.20.0
Latest release: almost 2 years ago - 33 downloads - 2,142 dependencies
shl198/sc_ppl 202306

  • version: 2.28.0
Latest release: over 1 year ago - 52 downloads - 2,005 dependencies
alexthiery/seurat-monocle 0.1

  • version: 2.18.0
Latest release: almost 2 years ago - 27 downloads - 1,062 dependencies
abelean/seurat_azimuth 5b

  • version: 2.22.0
Latest release: over 1 year ago - 343 downloads - 1,141 dependencies
bixbeta/czid v3

  • version: 2.18.0
Latest release: over 1 year ago - 12 downloads - 421 dependencies
stormgod/deepmaps-cpu latest

  • version: 2.26.0
Latest release: over 1 year ago - 31 downloads - 1,710 dependencies
qdidiscoveryservices/pseudobulk 1.1

  • version: 2.18.0
Latest release: over 2 years ago - 10 downloads - 1,112 dependencies
ruben6um/satijalab_seurat_slingshot_muscat_harmony_glmgampoi_svglite latest

  • version: 2.18.0
Latest release: almost 2 years ago - 8 downloads - 406 dependencies
bixbeta/cluster_profiler v1

  • version: 2.18.0
Latest release: almost 2 years ago - 8 downloads - 1,038 dependencies
dsouzd04/himc_zellkonverter 1.6.5

  • version: 2.24.1
Latest release: almost 2 years ago - 25 downloads - 953 dependencies
alkoenig08/harmonyseurat latest

Docker container built on satijalab/seurat with Broad Institute's "Harmony" package installed.

  • version: 2.26.0
Latest release: over 1 year ago - 15 downloads - 931 dependencies
apollodorus/genentech-jp v1

  • version: 2.22.0
Latest release: almost 2 years ago - 22 downloads - 1,947 dependencies
bixbeta/pavian v1

  • version: 2.18.0
Latest release: almost 2 years ago - 8 downloads - 388 dependencies
yosuketanigawa/rocker-geospatial-seurat latest

Docker image of Seurat installed on R Studio

  • version: 2.24.1
Latest release: over 1 year ago - 75 downloads - 512 dependencies
compbiocore/jupyterhub-docker-images-jh_image 20230524

  • version: 2.26.0
Latest release: over 1 year ago - 11 downloads - 3,115 dependencies
wlc27/dcanr v1

  • version: 2.26.0
Latest release: almost 2 years ago - 10 downloads - 1,681 dependencies
chiajungl/seurat 4.3.0-5.0

  • version: 2.28.0
Latest release: 11 months ago - 17 downloads - 1,249 dependencies
archang/seurat-zellk latest

  • version: 2.26.0
Latest release: over 1 year ago - 9 downloads - 935 dependencies
winuthayanon/seurat 4.3.0

  • version: 2.26.0
Latest release: over 1 year ago - 15 downloads - 2,660 dependencies
brianyee/cropseq-essentials 1.0.0

  • version: 2.22.0
Latest release: over 1 year ago - 9 downloads - 2,274 dependencies
bigomics/omicsplayground master

Self-service analytics for big omics data

  • version: 2.22.0
Latest release: 12 months ago - 9,749 downloads - 1,551 dependencies
abelean/seurat_desctools 4.1.0

  • version: 2.22.0
Latest release: almost 2 years ago - 605 downloads - 1,090 dependencies
bigomics/omicsplayground-base ub2204_v2

  • version: 2.22.0
Latest release: about 1 year ago - 1,389 downloads - 1,536 dependencies
johnjun094/scgsea 0.3.11

DockerFile for benchmarking ssGSEA for single-cell RNA-seq

  • version: 2.20.0
Latest release: about 1 year ago - 388 downloads - 924 dependencies
jesusgf23/allenseurat latest

  • version: 2.26.0
Latest release: over 1 year ago - 328 downloads - 933 dependencies
cmccornack/crmsc latest

  • version: 2.22.0
Latest release: over 1 year ago - 289 downloads - 1,476 dependencies
jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

  • version: 2.18.0
Latest release: over 1 year ago - 156 downloads - 1,173 dependencies
chiajungl/scrna-extra 4.3.0-1.4-4.3

  • version: 2.28.0
Latest release: over 1 year ago - 116 downloads - 1,350 dependencies
stefanucciluca/tregopathies latest

  • version: 2.26.0
Latest release: over 1 year ago - 72 downloads - 488 dependencies
etycksen/sc_deluxe 0.2

  • version: 2.26.0
Latest release: about 1 year ago - 249 downloads - 757 dependencies
bioxfu/xseurat2 latest

  • version: 2.26.0
Latest release: almost 2 years ago - 36 downloads - 982 dependencies
robertplayer/scidap-genelists v3.0.0

  • version: 2.22.0
Latest release: about 1 year ago - 74 downloads - 609 dependencies
yosuketanigawa/rstudio_yt latest

  • version: 2.24.1
Latest release: over 1 year ago - 38 downloads - 2,089 dependencies
chiajungl/scrna 4.3.0-5.0

  • version: 2.28.0
Latest release: 11 months ago - 46 downloads - 1,312 dependencies
winuthayanon/rstudio RS4.3.1BM3.17

  • version: 2.28.0
Latest release: over 1 year ago - 29 downloads - 2,687 dependencies
ycli1995/bioinfo_dev 1.0.1

  • version: 2.28.0
Latest release: 11 months ago - 48 downloads - 4,337 dependencies
dongminshin/sc_ppl 1.65

  • version: 2.26.0
Latest release: 8 months ago - 121 downloads - 967 dependencies
igrisch/seuratharmony latest

  • version: 2.26.0
Latest release: over 1 year ago - 19 downloads - 931 dependencies
pl92297/sceqtl latest

  • version: 2.26.0
Latest release: over 1 year ago - 14 downloads - 930 dependencies
cplaisier/ccafv2_extra latest

  • version: 2.26.0
Latest release: about 1 year ago - 13 downloads - 1,463 dependencies
forest2000/seuratv5 latest

Update Seurat to version 5

  • version: 2.26.0
Latest release: about 1 year ago - 12 downloads - 1,130 dependencies
abelean/seurat_deg 4.1.0

  • version: 2.22.0
Latest release: almost 2 years ago - 12 downloads - 1,083 dependencies