nfancy/scflow : dev
Latest release: over 1 year ago - 275 downloads - 778 dependencies
JSONDependencies
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.60.2
- AnnotationHub 3.6.0
- BH 1.81.0-1
- Biobase 2.58.0
- BiocFileCache 2.6.1
- BiocGenerics 0.44.0
- BiocManager 1.30.20
- BiocNeighbors 1.16.0
- BiocParallel 1.32.6
- BiocSingular 1.14.0
- BiocStyle 2.26.0
- BiocVersion 3.16.0
- Biostrings 2.66.0
- Cairo 1.6-0
- DBI 1.1.3
- DT 0.27
- DelayedArray 0.24.0
- DelayedMatrixStats 1.20.0
- DirichletReg 0.7-1
- DoubletFinder 2.0.3
- DropletUtils 1.18.1
- EWCE 1.6.0
- ExperimentHub 2.6.0
- FNN 1.1.3.1
- Formula 1.2-5
- GenomeInfoDb 1.34.9
- GenomeInfoDbData 1.2.9
- GenomicRanges 1.50.2
- HDF5Array 1.26.0
- HGNChelper 0.8.1
- Hmisc 5.0-1
- IRanges 2.32.0
- KEGGREST 1.38.0
- KernSmooth 2.23-20
- MASS 7.3-58.3
- MAST 1.24.1
- Matrix.utils 0.9.7
- Matrix 1.5-3
- MatrixGenerics 1.10.0
- MatrixModels 0.5-1
- One2One 0.1.1
- R.cache 0.16.0
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.2
- R6 2.5.1
- RANN 2.6.1
- RApiSerialize 0.1.2
- RColorBrewer 1.1-3
- RCurl 1.98-1.10
- RNOmni 1.0.1
- ROCR 1.0-11
- RSQLite 2.3.0
- Rcpp 1.0.10
- RcppAnnoy 0.0.20
- RcppArmadillo 0.12.0.1.0
- RcppEigen 0.3.3.9.3
- RcppHNSW 0.4.1
- RcppML 0.3.7
- RcppParallel 5.1.7
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- RcppTOML 0.2.2
- ResidualMatrix 1.8.0
- Rhdf5lib 1.20.0
- RhpcBLASctl 0.23-42
- Rtsne 0.16
- S4Vectors 0.36.2
- ScaledMatrix 1.6.0
- Seurat 4.3.0
- SeuratObject 4.1.3
- SingleCellExperiment 1.20.1
- SparseM 1.81
- SummarizedExperiment 1.28.0
- UpSetR 1.4.0
- WebGestaltR 0.4.5
- XML 3.99-0.13
- XVector 0.38.0
- abind 1.4-5
- apcluster 1.4.10
- ape 5.7-1
- aplot 0.1.10
- argparse 2.2.2
- askpass 1.1
- assertthat 0.2.1
- babelgene 22.9
- backports 1.4.1
- base64enc 0.1-3
- base 4.2.2
- batchelor 1.14.1
- beachmat 2.14.2
- beachtest 1.0.0
- beeswarm 0.4.0
- bib2df 1.1.2.0
- biomaRt 2.54.1
- bit64 4.0.5
- bit 4.0.5
- bitops 1.0-7
- blob 1.2.3
- bookdown 0.33
- boot 1.3-28.1
- brew 1.0-8
- brio 1.1.3
- broom 1.0.4
- bslib 0.4.2
- caTools 1.18.2
- cachem 1.0.7
- callr 3.7.3
- car 3.1-1
- carData 3.0-5
- cellranger 1.1.0
- checkmate 2.1.0
- class 7.3-21
- classInt 0.4-9
- cli 3.6.0
- clipr 0.8.0
- cluster 2.1.4
- codetools 0.2-19
- colorspace 2.1-0
- commonmark 1.8.1
- compiler 4.2.2
- conflicted 1.2.0
- corrplot 0.92
- covr 3.6.1
- cowplot 1.1.1
- cpp11 0.4.3
- crayon 1.5.2
- credentials 1.3.2
- crosstalk 1.2.0
- crul 1.3
- curl 5.0.0
- data.table 1.14.8
- datasets 4.2.2
- dbplyr 2.3.1
- deldir 1.0-6
- desc 1.4.2
- devtools 2.4.5
- diffobj 0.3.5
- digest 0.6.31
- doParallel 1.0.17
- doRNG 1.8.6
- docopt 0.7.1
- dotCall64 1.0-2
- downlit 0.4.2
- dplyr 1.1.0
- dqrng 0.3.0
- dtplyr 1.3.0
- e1071 1.7-13
- edgeR 3.40.2
- ellipsis 0.3.2
- english 1.2-6
- enrichR 3.1
- evaluate 0.20
- ewceData 1.6.0
- fansi 1.0.4
- farver 2.1.1
- fastmap 1.1.1
- fields 14.1
- filelock 1.0.2
- findpython 1.0.7
- fitdistrplus 1.1-8
- fontBitstreamVera 0.1.1
- fontLiberation 0.1.0
- fontawesome 0.5.0
- fontquiver 0.2.1
- forcats 1.0.0
- foreach 1.5.2
- foreign 0.8-84
- formatR 1.14
- formattable 0.2.1
- fs 1.6.1
- furrr 0.3.1
- futile.logger 1.4.3
- futile.options 1.0.1
- future.apply 1.10.0
- future 1.32.0
- gargle 1.3.0
- gdtools 0.3.2
- generics 0.1.3
- gert 1.9.2
- gfonts 0.2.0
- ggbeeswarm 0.7.1
- ggdendro 0.1.23
- ggfun 0.0.9
- ggplot2 3.4.1
- ggplotify 0.1.0
- ggpubr 0.6.0
- ggrastr 1.0.1
- ggrepel 0.9.3
- ggridges 0.5.4
- ggsci 3.0.0
- ggsignif 0.6.4
- ggtree 3.6.2
- gh 1.4.0
- gitcreds 0.1.2
- globals 0.16.2
- glue 1.6.2
- goftest 1.2-3
- googledrive 2.0.0
- googlesheets4 1.0.1
- gplots 3.1.3
- gprofiler2 0.2.1
- grDevices 4.2.2
- graph 1.76.0
- graphics 4.2.2
- grid 4.2.2
- gridExtra 2.3
- gridGraphics 0.5-1
- grr 0.9.5
- gtable 0.3.1
- gtools 3.9.4
- haven 2.5.2
- hdf5r 1.3.8
- here 1.0.1
- highr 0.10
- hms 1.1.2
- homologene 1.4.68.19.3.27
- htmlTable 2.4.1
- htmltools 0.5.4
- htmlwidgets 1.6.1
- httpcode 0.3.0
- httpuv 1.6.9
- httr2 0.2.2
- httr 1.4.5
- humaniformat 0.6.0
- hunspell 3.0.2
- ica 1.0-3
- ids 1.0.1
- igraph 1.4.1
- ini 0.3.1
- interactiveDisplayBase 1.36.0
- irlba 2.3.5.1
- isoband 0.2.7
- iterators 1.0.14
- itertools 0.1-3
- jquerylib 0.1.4
- jsonlite 1.8.4
- kBET 0.99.6
- knitr 1.42
- labeling 0.4.2
- lambda.r 1.2.4
- later 1.3.0
- lattice 0.20-45
- lazyeval 0.2.2
- leaflet.providers 1.9.0
- leaflet 2.1.2
- leiden 0.4.3
- leidenbase 0.1.14
- lifecycle 1.0.3
- limma 3.54.2
- listenv 0.9.0
- littler 0.3.17
- lme4 1.1-31
- lmtest 0.9-40
- locfit 1.5-9.7
- loomR 0.2.0
- lubridate 1.9.2
- magrittr 2.0.3
- maps 3.4.1
- markdown 1.5
- matrixStats 0.63.0
- maxLik 1.5-2
- mclust 6.0.0
- memoise 2.0.1
- methods 4.2.2
- mgcv 1.8-42
- mime 0.12
- miniUI 0.1.1.1
- minqa 1.2.5
- miscTools 0.6-26
- mnormt 2.1.1
- modelr 0.1.10
- monocle3 1.3.1
- morebeach 1.0.0
- morebeachtests 1.0.0
- multtest 2.54.0
- munsell 0.5.0
- nlme 3.1-162
- nloptr 2.0.3
- nnet 7.3-18
- numDeriv 2016.8-1.1
- openssl 2.0.6
- org.testing.db 0.1
- orthogene 1.4.2
- paletteer 1.5.0
- parallel 4.2.2
- parallelly 1.34.0
- patchwork 1.1.2
- pbapply 1.7-0
- pbkrtest 0.5.2
- pbmcapply 1.5.1
- pheatmap 1.0.12
- pillar 1.8.1
- pkgbuild 1.4.0
- pkgconfig 2.0.3
- pkgdown 2.0.7
- pkgload 1.3.2
- plogr 0.2.0
- plotly 4.10.1.9000
- plyr 1.8.8
- png 0.1-8
- polyclip 1.10-4
- polynom 1.4-1
- praise 1.0.0
- preprocessCore 1.60.2
- prettydoc 0.4.1
- prettyunits 1.1.1
- prismatic 1.1.1
- processx 3.8.0
- profvis 0.3.7
- progress 1.2.2
- progressr 0.13.0
- promises 1.2.0.1
- proxy 0.4-27
- ps 1.7.2
- pscl 1.5.5
- psych 2.2.9
- purrr 1.0.1
- qs 0.25.5
- quantreg 5.94
- ragg 1.2.5
- rappdirs 0.3.3
- raster 3.6-20
- rcmdcheck 1.4.0
- readr 2.1.4
- readxl 1.4.2
- rematch2 2.1.2
- rematch 1.0.1
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- repmis 0.5
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- reshape2 1.4.4
- reticulate 1.28
- rex 1.2.1
- rhdf5 2.42.1
- rhdf5filters 1.10.1
- riverplot 0.10
- rjson 0.2.21
- rlang 1.0.6
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- rngtools 1.5.2
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- rvest 1.0.3
- s2 1.1.2
- sandwich 3.0-2
- sass 0.4.5
- scFlow 0.7.2
- scFlowExamples 0.1.0
- scales 1.2.1
- scater 1.26.1
- scattermore 0.8
- sctransform 0.3.5
- scuttle 1.8.4
- selectr 0.4-2
- sessioninfo 1.2.2
- sf 1.0-10
- shiny 1.7.4
- sitmo 2.0.2
- slam 0.1-50
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- sp 1.6-0
- spData 2.2.2
- spam 2.9-1
- sparseMatrixStats 1.10.0
- spatial 7.3-16
- spatstat.data 3.0-1
- spatstat.explore 3.0-6
- spatstat.geom 3.1-0
- spatstat.random 3.1-4
- spatstat.sparse 3.0-1
- spatstat.utils 3.0-2
- spdep 1.2-8
- speedglm 0.3-4
- spelling 2.2
- splines 4.2.2
- stats4 4.2.2
- stats 4.2.2
- stringfish 0.15.7
- stringi 1.7.12
- stringr 1.5.0
- survival 3.5-5
- svglite 2.1.1
- sys 3.4.1
- systemfonts 1.0.4
- tcltk 4.2.2
- tensor 1.5
- terra 1.7-18
- testRcppAttributePackage 1.0
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testthat 3.1.7
- textshaping 0.3.6
- threejs 0.3.3
- tibble 3.2.0
- tidyr 1.3.0
- tidyselect 1.2.0
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- tidyverse 2.0.0
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- tinytex 0.44
- tools 4.2.2
- translations 4.2.2
- treeio 1.22.0
- triebeard 0.4.1
- tzdb 0.3.0
- units 0.8-1
- urlchecker 1.0.1
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- utils 4.2.2
- uuid 1.1-0
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- yulab.utils 0.0.6
- zip 2.2.2
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- actions/cache v2
- actions/checkout v2
- actions/checkout v3
- actions/download-artifact v2
- actions/setup-python v2
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- codecov/codecov-action v1
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- github/codeql-action v1
- github/codeql-action v1
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- github.com/docker/distribution v2.8.1 incompatible
- github.com/docker/docker-credential-helpers v0.6.4
- github.com/docker/docker v20.10.17 incompatible
- github.com/emicklei/go-restful v2.16.0 incompatible
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