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Package Usage : cran : preprocessCore

Explore the latest package usage data for preprocessCore in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 172
Total downloads: 1,803,907
Showing first 100 dependents

More details on packages.ecosyste.ms - JSON

ccdlstaging/dr_illumina 1.45.8

  • version: 1.40.0
Latest release: over 2 years ago - 6,466 downloads - 893 dependencies
qdidiscoveryservices/ms_pipeline latest

  • version: 1.52.1
Latest release: almost 5 years ago - 3,042 downloads - 1,044 dependencies
veitveit/compomicsworkflow dev

  • version: 1.52.0
Latest release: almost 5 years ago - 99 downloads - 537 dependencies
prismcmap/biomarker 4602f53feb5a

  • version: 1.52.1
Latest release: 9 months ago - 10,896 downloads - 633 dependencies
prismcmap/sushi v0.0.2

  • version: 1.52.1
Latest release: almost 4 years ago - 1,331 downloads - 723 dependencies
ccdlstaging/dr_affymetrix 1.45.8

  • version: 1.40.0
Latest release: over 2 years ago - 95,753 downloads - 1,220 dependencies
almahmoud/workshops-auto-spectratutorials latest

  • version: 1.59.0
Latest release: over 3 years ago - 89 downloads - 2,003 dependencies
prismcmap/base-clue-pseq v0.0.1

  • version: 1.52.1
Latest release: almost 4 years ago - 116 downloads - 318 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 1.42.0
Latest release: over 7 years ago - 443 downloads - 9,302 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 1.62.1
Latest release: over 2 years ago - 155 downloads - 679 dependencies
evolomicsmbbt/rna_seq latest

  • version: 1.56.0
Latest release: almost 3 years ago - 138 downloads - 412 dependencies
jpdodson/dsrna_docker latest

  • version: 1.60.2
Latest release: almost 3 years ago - 79 downloads - 208 dependencies
matzieb/shiny-4.0.3-seurat4-spatial latest

  • version: 1.52.1
Latest release: over 2 years ago - 20 downloads - 1,061 dependencies
prismcmap/drc MTS028_PMTS079

  • version: 1.52.1
Latest release: 5 months ago - 6,397 downloads - 651 dependencies
zymoresearch/bio_resource_builder v1.0

  • version: 1.60.2
Latest release: over 2 years ago - 22 downloads - 335 dependencies
bioconductor/r-ver 3.21-r-4.5.1

  • version: 1.63.1, 1.70.0
Latest release: about 2 months ago - 20,253 downloads - 1,282 dependencies
ipbhalle/biobyte latest

  • version: 1.60.2
Latest release: over 2 years ago - 22 downloads - 1,311 dependencies
recetox/xmsanalyzer 2.0.6.1-recetox1

  • version: 1.50.0
Latest release: about 5 years ago - 59 downloads - 588 dependencies
mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

  • version: 1.42.0
Latest release: over 7 years ago - 40 downloads - 9,414 dependencies
mattjmeier/r-odaf-hc-prod latest

  • version: 1.60.0
Latest release: almost 3 years ago - 50 downloads - 897 dependencies
broadcptac/panoply_so_nmf_report 1_3

  • version: 1.48.0
Latest release: over 2 years ago - 21 downloads - 725 dependencies
haileyzhang/phospho-analyst v1.0.2

  • version: 1.60.2
Latest release: over 1 year ago - 226 downloads - 796 dependencies
alanocallaghan/high-dimensional-stats-r latest

  • version: 1.61.0
Latest release: almost 3 years ago - 116 downloads - 1,601 dependencies
sagnikbanerjee15/ngpint 1.0.0

  • version: 1.57.0
Latest release: about 4 years ago - 44 downloads - 2,335 dependencies
chgyi/bio 3.5.1

  • version: 1.42.0
Latest release: about 7 years ago - 661 downloads - 1,077 dependencies
prismcmap/normalization EPS005

  • version: 1.52.1
Latest release: 5 months ago - 1,176 downloads - 627 dependencies
haileyzhang/lfq-analyst v1.2.6

A docker container for LFQ-Analyst

  • version: 1.60.2
Latest release: almost 2 years ago - 390 downloads - 1,496 dependencies
jichanghan/scrna_seurat4_monocle2_wgcna_0213 06022023

  • version: 1.52.1
Latest release: over 2 years ago - 302 downloads - 1,173 dependencies
biocontainers/bioconductor-altcdfenvs v1-2.36.0-1-deb_cv1

  • version: 1.36.0
Latest release: over 7 years ago - 147 downloads - 415 dependencies
mfsentma/atacseq latest

  • version: 1.56.0
Latest release: over 2 years ago - 34 downloads - 852 dependencies
cgwyx/easymicrobiomer latest

The best practice for microbiome analysis using R

  • version: 1.63.1
Latest release: over 2 years ago - 47 downloads - 1,604 dependencies
fallingstar10/hbsigrocker latest

  • version: 1.62.1
Latest release: over 2 years ago - 256 downloads - 1,223 dependencies
denklewer/linseedv2 latest

  • version: 1.56.0
Latest release: almost 3 years ago - 425 downloads - 1,153 dependencies
tercen/normalyzer_operator 0.1.4

  • version: 1.58.0
Latest release: almost 2 years ago - 96 downloads - 590 dependencies
nolandocker/chipseq latest

Ubuntu image with R,(4.3.3), Python(3.12), java(21) including bioinformatics tools for ChIP-seq.

  • version: 1.48.0
Latest release: almost 3 years ago - 93 downloads - 359 dependencies
mattjmeier/r-odaf-hc latest

Under Development. Containerized version of the R-ODAF Health Canada Pipeline.

  • version: 1.60.0
Latest release: almost 3 years ago - 33 downloads - 598 dependencies
prismcmap/qc EPS005

  • version: 1.52.1
Latest release: 5 months ago - 739 downloads - 245 dependencies
wuys13/docker-ckg latest

  • version: 1.48.0
Latest release: almost 3 years ago - 39 downloads - 2,169 dependencies
broadcptacdev/activedriver_mimp latest

  • version: 1.48.0
Latest release: over 2 years ago - 92 downloads - 374 dependencies
shivaprasadpatil965/firstimage latest

  • version: 1.48.0
Latest release: almost 3 years ago - 40 downloads - 1,563 dependencies
prismcmap/lfc 0.0.1

  • version: 1.52.1
Latest release: over 2 years ago - 780 downloads - 245 dependencies
prismcmap/batch_correction EPS005

  • version: 1.52.1
Latest release: 5 months ago - 756 downloads - 245 dependencies
alexsickler/open-pedcan latest

  • version: 1.48.0
Latest release: almost 3 years ago - 219 downloads - 864 dependencies
etretiakov/workbench-session-complete jammy-2024.09.19-custom-12.9

  • version: 1.62.1
Latest release: about 1 year ago - 1,187 downloads - 6,961 dependencies
broadcptac/panoply_so_nmf_sankey_report DEV

  • version: 1.48.0
Latest release: over 2 years ago - 74 downloads - 383 dependencies
prismcmap/compound_summary APS005

  • version: 1.52.1
Latest release: 3 months ago - 675 downloads - 627 dependencies
gpato/lacen-app 3.0.0

  • version: 1.56.0
Latest release: 12 months ago - 1,018 downloads - 801 dependencies
mattjmeier/r-odaf-hc-base latest

  • version: 1.60.0
Latest release: almost 3 years ago - 20 downloads - 598 dependencies
philipp02/pathway v1

  • version: 1.61.0
Latest release: about 3 years ago - 34 downloads - 345 dependencies
sameetmehta/docker_report_apptainer devel

  • version: 1.62.1
Latest release: over 2 years ago - 21 downloads - 352 dependencies
am5747/methylation latest

  • version: 1.60.2
Latest release: almost 3 years ago - 31 downloads - 290 dependencies
weishwu/planet 12052022

  • version: 1.58.0
Latest release: almost 3 years ago - 32 downloads - 341 dependencies
omicschef/epigenomechef v1.1.5

  • version: 1.62.1
Latest release: over 1 year ago - 414 downloads - 1,066 dependencies
nfancy/scflow 0.7.4

  • version: 1.60.2
Latest release: almost 2 years ago - 300 downloads - 778 dependencies
mengchen18/xcmsviewer_process latest

  • version: 1.60.2
Latest release: over 2 years ago - 55 downloads - 1,355 dependencies
mhettich0years/r-images v1.1.2

  • version: 1.60.1
Latest release: almost 3 years ago - 143 downloads - 334 dependencies
yosuketanigawa/rstudio_yt latest

  • version: 1.58.0
Latest release: over 2 years ago - 207 downloads - 2,089 dependencies
broadcptacdev/activedriver latest

  • version: 1.48.0
Latest release: over 2 years ago - 98 downloads - 720 dependencies
recetox/xmsannotator latest

  • version: 1.50.0
Latest release: over 4 years ago - 353 downloads - 448 dependencies
ccdlstaging/dr_salmon 1.45.8

  • version: 1.40.0
Latest release: over 2 years ago - 62,302 downloads - 916 dependencies
compbiocore/dscov_sct 20221201

  • version: 1.60.0
Latest release: almost 3 years ago - 44 downloads - 1,031 dependencies
compbiocore/lee_isg_erv 20230306

  • version: 1.60.2
Latest release: over 2 years ago - 13 downloads - 1,038 dependencies
jenfisher7/rstudio_sbae latest

  • version: 1.60.1
Latest release: almost 3 years ago - 30 downloads - 1,604 dependencies
bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

  • version: 1.62.1, 1.60.2
Latest release: about 2 years ago - 110 downloads - 1,150 dependencies
digitalproteomes/mh_class 2023

  • version: 1.56.0
Latest release: over 2 years ago - 82 downloads - 3,939 dependencies
njjtemp/scrattch-mapping 4.2.0

  • version: 1.52.1
Latest release: over 2 years ago - 678 downloads - 850 dependencies
jackiezhuqi/bio-rstudio latest

  • version: 1.60.2
Latest release: over 2 years ago - 86 downloads - 1,158 dependencies
markataylor/r_yufree v1.0.0

  • version: 1.60.0
Latest release: almost 3 years ago - 32 downloads - 1,514 dependencies
nfcore/atacseq 1.2.2

A Docker container for the nf-core/atacseq pipeline.

  • version: 1.48.0
Latest release: over 3 years ago - 55,549 downloads - 352 dependencies
mziemann/meth_analysis latest

Based on BioC release 3.14, this image is designed for analysis of infinium methylation array data

  • version: 1.56.0
Latest release: over 2 years ago - 9 downloads - 1,347 dependencies
prangannath/rna_seq latest

Container for EvolOMICS RNA_Seq pipeline

  • version: 1.56.0
Latest release: almost 3 years ago - 115 downloads - 1,382 dependencies
singha53/modc v0.1

  • version: 1.56.0
Latest release: over 2 years ago - 35 downloads - 783 dependencies
madhu99/sb6 latest

  • version: 1.60.0
Latest release: almost 3 years ago - 14 downloads - 666 dependencies
vegesnam/metaboanalyst 6thnov2024

  • version: 1.60.2
Latest release: about 1 year ago - 236 downloads - 358 dependencies
jordanwhitlock/setbp1_manuscript_panda_1.0.1 latest

  • version: 1.60.2
Latest release: over 2 years ago - 42 downloads - 1,720 dependencies
bicore/gcs_10x_rnaseq_qc 4.2.0

  • version: 1.58.0
Latest release: almost 3 years ago - 35 downloads - 1,454 dependencies
mdivr/chicago v2

  • version: 1.60.2
Latest release: over 2 years ago - 45 downloads - 645 dependencies
alleninst/arrow_scrattch_hmapping_on_hpc latest

  • version: 1.56.0
Latest release: over 2 years ago - 67 downloads - 1,556 dependencies
imegusu/rstudio_rnaseq_all3 latest

RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq

  • version: 1.60.2
Latest release: over 2 years ago - 33 downloads - 1,568 dependencies
markataylor/r_mass_spec v1.0.0

  • version: 1.60.0
Latest release: almost 3 years ago - 50 downloads - 919 dependencies
zjnolen/angsd-snakemake-pipeline 0.1

  • version: 1.56.0
Latest release: over 2 years ago - 142 downloads - 643 dependencies
mfsentma/rna latest

  • version: 1.56.0
Latest release: over 2 years ago - 12 downloads - 807 dependencies
ycli1995/bioinfo_dev 1.1.0

  • version: 1.62.1
Latest release: over 1 year ago - 185 downloads - 4,337 dependencies
wyangwu/r4.1.2 latest

  • version: 1.56.0
Latest release: over 2 years ago - 93 downloads - 827 dependencies
weishwu/diffbind 3.6.5

  • version: 1.58.0
Latest release: almost 3 years ago - 31 downloads - 1,507 dependencies
compbiocore/jupyterhub-docker-images-jh_image 20230524

  • version: 1.60.2
Latest release: over 2 years ago - 139 downloads - 3,115 dependencies
veitveit/moffworkflow dev

  • version: 1.50.0
Latest release: about 5 years ago - 46 downloads - 449 dependencies
haileyzhang/fragpipe-analyst v1.13

A Docker container of Fragpipe-Analyst

  • version: 1.60.2
Latest release: 6 months ago - 263 downloads - 1,511 dependencies
wlc27/dcanr v1

  • version: 1.60.1
Latest release: almost 3 years ago - 82 downloads - 1,681 dependencies
preethiilumina/diffbind 1.5.1

fixed genome name

  • version: 1.60.2
Latest release: 12 months ago - 319 downloads - 626 dependencies
bianca7/mompreprocess latest

  • version: 1.63.1
Latest release: over 2 years ago - 415 downloads - 1,340 dependencies
rayne233/lcms latest

  • version: 1.56.0
Latest release: over 2 years ago - 100 downloads - 658 dependencies
fallingstar10/gmadeomicsrocker tiny

  • version: 1.62.1
Latest release: over 1 year ago - 84 downloads - 1,224 dependencies
phenomedb/phenomedb-api-npc latest

  • version: 1.60.2
Latest release: over 2 years ago - 30 downloads - 1,310 dependencies
nfcore/chipseq 1.2.2

A docker image for nf-core/chipseq

  • version: 1.50.0
Latest release: over 4 years ago - 53,708 downloads - 309 dependencies