Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
chgyi/bio : 3.5.1
Latest release: about 6 years ago - 158 downloads - 1,077 dependencies
JSONDependencies
- @PKGNAME@ @PKGVERSION@
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.42.1
- AnnotationFilter 1.4.0
- AnnotationHub 2.12.1
- BH 1.66.0-1
- BSgenome 1.48.0
- BiasedUrn 1.07
- Biobase 2.40.0
- BiocGenerics 0.26.0
- BiocInstaller 1.30.0
- BiocParallel 1.14.2
- Biostrings 2.48.0
- ChAMP 2.10.1
- ChAMPdata 2.12.0
- DBI 1.0.0
- DEGseq 1.34.1
- DESeq2 1.20.0
- DESeq 1.32.0
- DEoptimR 1.0-8
- DMRcate 1.16.0
- DMRcatedata 1.16.0
- DNAcopy 1.54.0
- DO.db 2.9
- DOSE 3.6.1
- DSS 2.28.0
- DelayedArray 0.6.5
- DelayedMatrixStats 1.2.0
- FDb.InfiniumMethylation.hg19 2.2.0
- FEM 3.8.0
- Formula 1.2-3
- GEOquery 2.48.0
- GO.db 3.6.0
- GOSemSim 2.6.2
- GenomeInfoDb 1.16.0
- GenomeInfoDbData 1.1.0
- GenomicAlignments 1.16.0
- GenomicFeatures 1.32.2
- GenomicRanges 1.32.6
- Gviz 1.24.0
- HDF5Array 1.8.1
- Hmisc 4.1-1
- IRanges 2.14.11
- IRdisplay 0.5.9000
- IRkernel 0.8.12.9000
- Illumina450ProbeVariants.db 1.16.0
- IlluminaHumanMethylation450kanno.ilmn12.hg19 0.6.0
- IlluminaHumanMethylation450kmanifest 0.4.0
- IlluminaHumanMethylationEPICanno.ilm10b2.hg19 0.6.0
- IlluminaHumanMethylationEPICmanifest 0.3.0
- JADE 2.0-1
- KEGG.db 3.2.3
- KEGGREST 1.20.1
- KEGGgraph 1.40.0
- KernSmooth 2.23-15
- MASS 7.3-50
- Matrix 1.2-14
- ProtGenerics 1.12.0
- R.methodsS3 1.7.1
- R.oo 1.22.0
- R.utils 2.7.0
- R6 2.2.2
- RColorBrewer 1.1-2
- RCurl 1.95-4.11
- ROC 1.56.0
- RPMM 1.25
- RSQLite 2.1.1
- Rcpp 0.12.18
- RcppArmadillo 0.9.100.5.0
- Rhdf5lib 1.2.1
- Rsamtools 1.32.3
- S4Vectors 0.18.3
- SparseM 1.77
- SummarizedExperiment 1.10.1
- TxDb.Hsapiens.UCSC.hg19.knownGene 3.2.2
- UpSetR 1.3.3
- VariantAnnotation 1.26.1
- WGCNA 1.63
- XML 3.98-1.16
- XVector 0.20.0
- abind 1.4-5
- acepack 1.4.1
- affxparser 1.52.0
- affy 1.58.0
- affyio 1.50.0
- annotate 1.58.0
- assertthat 0.2.0
- backports 1.1.2
- ballgown 2.12.0
- base64 2.0
- base64enc 0.1-3
- base 3.5.1
- baySeq 2.14.0
- beanplot 1.2
- bibtex 0.4.2
- bindr 0.1.1
- bindrcpp 0.2.2
- biomaRt 2.36.1
- biovizBase 1.28.2
- bit64 0.9-7
- bit 1.1-14
- bitops 1.0-6
- blob 1.1.1
- boot 1.3-20
- bsseq 1.16.1
- bumphunter 1.22.0
- cellranger 1.1.0
- checkmate 1.8.5
- class 7.3-14
- cli 1.0.0
- clue 0.3-55
- cluster 2.0.7-1
- clusterProfiler 3.8.1
- codetools 0.2-15
- colorspace 1.3-2
- combinat 0.0-8
- compiler 3.5.1
- corrplot 0.84
- cowplot 0.9.3
- crayon 1.3.4
- crosstalk 1.0.0
- curl 3.2
- data.table 1.11.4
- datasets 3.5.1
- dendextend 1.8.0
- devtools 1.13.6
- dichromat 2.0-0
- digest 0.6.16
- diptest 0.75-7
- doParallel 1.0.11
- doRNG 1.7.1
- dplyr 0.7.6
- dynamicTreeCut 1.63-1
- edgeR 3.22.3
- enrichplot 1.0.2
- ensembldb 2.4.1
- evaluate 0.11
- fansi 0.3.0
- fastICA 1.2-1
- fastcluster 1.1.25
- fastmatch 1.1-0
- ff 2.2-14
- fgsea 1.6.0
- fit.models 0.5-14
- flexmix 2.3-14
- foreach 1.4.4
- foreign 0.8-71
- formatR 1.5
- fpc 2.1-11.1
- futile.logger 1.4.3
- futile.options 1.0.1
- geneLenDataBase 1.16.0
- genefilter 1.62.0
- geneplotter 1.58.0
- getopt 1.20.2
- ggforce 0.1.3
- ggplot2 3.0.0
- ggraph 1.0.2
- ggrepel 0.8.0
- ggridges 0.5.0
- git2r 0.23.0
- globaltest 5.34.1
- glue 1.3.0
- goseq 1.32.0
- grDevices 3.5.1
- graph 1.58.0
- graphics 3.5.1
- grid 3.5.1
- gridExtra 2.3
- gtable 0.2.0
- gtools 3.8.1
- hexbin 1.27.2
- highr 0.7
- hms 0.4.2
- htmlTable 1.12
- htmltools 0.3.6
- htmlwidgets 1.2
- httpuv 1.4.5
- httr 1.3.1
- igraph 1.2.2
- illuminaio 0.22.0
- impute 1.54.0
- interactiveDisplayBase 1.18.0
- isva 1.9
- iterators 1.0.10
- jsonlite 1.5
- kernlab 0.9-27
- knitr 1.20
- labeling 0.3
- lambda.r 1.2.3
- later 0.7.4
- lattice 0.20-35
- latticeExtra 0.6-28
- lazyeval 0.2.1
- limma 3.36.3
- locfit 1.5-9.1
- lumi 2.32.0
- magrittr 1.5
- markdown 0.8
- marray 1.58.0
- matrixStats 0.54.0
- mclust 5.4.1
- memoise 1.1.0
- methods 3.5.1
- methylumi 2.26.0
- mgcv 1.8-24
- mime 0.5
- minfi 1.26.2
- missMethyl 1.14.0
- mnormt 1.5-5
- modeltools 0.2-22
- multtest 2.36.0
- munsell 0.5.0
- mvtnorm 1.0-8
- mvtnormAPI 1.0-0
- nleqslv 3.3.2
- nlme 3.1-137
- nnet 7.3-12
- nor1mix 1.2-3
- oligo 1.44.0
- oligoClasses 1.42.0
- openssl 1.0.2
- optparse 1.6.0
- org.Hs.eg.db 3.6.0
- org.testing.db 0.1
- parallel 3.5.1
- pbdZMQ 0.3-3
- pcaPP 1.9-73
- permute 0.9-4
- pheatmap 1.0.10
- pillar 1.3.0
- pkgconfig 2.0.2
- pkgmaker 0.27
- plogr 0.2.0
- plotly 4.8.0
- plyr 1.8.4
- png 0.1-7
- prabclus 2.2-6
- preprocessCore 1.42.0
- prettydoc 0.2.1
- prettyunits 1.0.2
- progress 1.2.0
- promises 1.0.1
- psych 1.8.4
- purrr 0.2.5
- quadprog 1.5-5
- qvalue 2.12.0
- readr 1.1.1
- readxl 1.1.0
- registry 0.5
- rematch 1.0.1
- repr 0.15.0
- reshape2 1.4.3
- reshape 0.8.7
- rhdf5 2.24.0
- rlang 0.2.2
- rmarkdown 1.10
- rngtools 1.3.1
- robust 0.4-18
- robustbase 0.93-2
- rpart 4.1-13
- rprojroot 1.3-2
- rrcov 1.4-4
- rstudioapi 0.7
- rtracklayer 1.40.6
- ruv 0.9.7
- rvcheck 0.1.0
- scales 1.0.0
- shiny 1.1.0
- shinythemes 1.1.1
- siggenes 1.54.0
- snow 0.4-2
- sourcetools 0.1.7
- spatial 7.3-11
- splines 3.5.1
- statmod 1.4.30
- stats4 3.5.1
- stats 3.5.1
- stringi 1.2.4
- stringr 1.3.1
- survival 2.42-6
- sva 3.28.0
- tcltk 3.5.1
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- tibble 1.4.2
- tidyr 0.8.1
- tidyselect 0.2.4
- tinytex 0.8
- tools 3.5.1
- topGO 2.32.0
- translations 3.5.1
- trimcluster 0.1-2.1
- tweenr 0.1.5
- units 0.6-0
- utf8 1.1.4
- utils 3.5.1
- uuid 0.1-2
- viridis 0.5.1
- viridisLite 0.3.0
- wateRmelon 1.24.0
- whisker 0.3-2
- withr 2.1.2
- xfun 0.3
- xml2 1.2.0
- xtable 1.8-3
- yaml 2.2.0
- zlibbioc 1.26.0
- ubuntu/adduser 3.113 nmu3ubuntu4
- ubuntu/apt-transport-https 1.2.27
- ubuntu/apt 1.2.27
- ubuntu/base-files 9.4ubuntu4.7
- ubuntu/base-passwd 3.5.39
- ubuntu/bash 4.3-14ubuntu1.2
- ubuntu/bedtools 2.25.0-1
- ubuntu/binutils 2.26.1-1ubuntu1~16.04.6
- ubuntu/blt 2.5.3 dfsg-3
- ubuntu/bowtie2 2.2.6-2
- ubuntu/bowtie 1.1.2-3
- ubuntu/bsdutils 1:2.27.1-6ubuntu3.6
- ubuntu/build-essential 12.1ubuntu2
- ubuntu/bzip2-doc 1.0.6-8
- ubuntu/bzip2 1.0.6-8
- ubuntu/ca-certificates-java 20160321ubuntu1
- ubuntu/ca-certificates 20170717~16.04.1
- ubuntu/coreutils 8.25-2ubuntu3~16.04
- ubuntu/cpp-5 5.4.0-6ubuntu1~16.04.10
- ubuntu/cpp 4:5.3.1-1ubuntu1
- ubuntu/curl 7.47.0-1ubuntu2.8
- ubuntu/dash 0.5.8-2.1ubuntu2
- ubuntu/dbus 1.10.6-1ubuntu3.3
- ubuntu/debconf 1.5.58ubuntu1
- ubuntu/debianutils 4.7
- ubuntu/dh-python 2.20151103ubuntu1.1
- ubuntu/diffutils 1:3.3-3
- ubuntu/dpkg-dev 1.18.4ubuntu1.4
- ubuntu/dpkg 1.18.4ubuntu1.4
- ubuntu/e2fslibs 1.42.13-1ubuntu1
- ubuntu/e2fsprogs 1.42.13-1ubuntu1
- ubuntu/fakeroot 1.20.2-1ubuntu1
- ubuntu/file 1:5.25-2ubuntu1.1
- ubuntu/findutils 4.6.0 git 20160126-2
- ubuntu/fontconfig-config 2.11.94-0ubuntu1.1
- ubuntu/fontconfig 2.11.94-0ubuntu1.1
- ubuntu/fonts-dejavu-core 2.35-1
- ubuntu/fonts-dejavu-extra 2.35-1
- ubuntu/fonts-lato 2.0-1
- ubuntu/fonts-lmodern 2.004.5-1
- ubuntu/g -5 5.4.0-6ubuntu1~16.04.10
- ubuntu/g 4:5.3.1-1ubuntu1
- ubuntu/gcc-5-base 5.4.0-6ubuntu1~16.04.10
- ubuntu/gcc-5 5.4.0-6ubuntu1~16.04.10
- ubuntu/gcc-6-base 6.0.1-0ubuntu1
- ubuntu/gcc 4:5.3.1-1ubuntu1
- ubuntu/gfortran-5 5.4.0-6ubuntu1~16.04.10
- ubuntu/gfortran 4:5.3.1-1ubuntu1
- ubuntu/ghc 7.10.3-7
- ubuntu/git-man 1:2.7.4-0ubuntu1.4
- ubuntu/git 1:2.7.4-0ubuntu1.4
- ubuntu/gnupg 1.4.20-1ubuntu3.2
- ubuntu/gpgv 1.4.20-1ubuntu3.2
- ubuntu/grep 2.25-1~16.04.1
- ubuntu/gzip 1.6-4ubuntu1
- ubuntu/hicolor-icon-theme 0.15-0ubuntu1.1
- ubuntu/hostname 3.16ubuntu2
- ubuntu/icu-devtools 55.1-7ubuntu0.4
- ubuntu/ifupdown 0.8.10ubuntu1.4
- ubuntu/init-system-helpers 1.29ubuntu4
- ubuntu/init 1.29ubuntu4
- ubuntu/initscripts 2.88dsf-59.3ubuntu2
- ubuntu/insserv 1.14.0-5ubuntu3
- ubuntu/iproute2 4.3.0-1ubuntu3.16.04.3
- ubuntu/ipython 2.4.1-1
- ubuntu/isc-dhcp-client 4.3.3-5ubuntu12.10
- ubuntu/isc-dhcp-common 4.3.3-5ubuntu12.10
- ubuntu/java-common 0.56ubuntu2
- ubuntu/javascript-common 11
- ubuntu/krb5-locales 1.13.2 dfsg-5ubuntu2
- ubuntu/less 481-2.1ubuntu0.2
- ubuntu/libacl1 2.2.52-3
- ubuntu/libalgorithm-diff-perl 1.19.03-1
- ubuntu/libalgorithm-diff-xs-perl 0.04-4build1
- ubuntu/libalgorithm-merge-perl 0.08-3
- ubuntu/libapparmor1 2.10.95-0ubuntu2.9
- ubuntu/libapt-pkg5.0 1.2.27
- ubuntu/libasan2 5.4.0-6ubuntu1~16.04.10
- ubuntu/libasn1-8-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libasound2-data 1.1.0-0ubuntu1
- ubuntu/libasound2 1.1.0-0ubuntu1
- ubuntu/libasyncns0 0.8-5build1
- ubuntu/libatk1.0-0 2.18.0-1
- ubuntu/libatk1.0-data 2.18.0-1
- ubuntu/libatm1 1:2.5.1-1.5
- ubuntu/libatomic1 5.4.0-6ubuntu1~16.04.10
- ubuntu/libattr1 1:2.4.47-2
- ubuntu/libaudit-common 1:2.4.5-1ubuntu2.1
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- ubuntu/libauthen-sasl-perl 2.1600-1
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- ubuntu/libblas-common 3.6.0-2ubuntu2
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- ubuntu/libblkid1 2.27.1-6ubuntu3.6
- ubuntu/libboost-iostreams1.58.0 1.58.0 dfsg-5ubuntu3.1
- ubuntu/libbsd-dev 0.8.2-1
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- ubuntu/libbz2-dev 1.0.6-8
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- ubuntu/libc6 2.23-0ubuntu10
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- ubuntu/libcomerr2 1.42.13-1ubuntu1
- ubuntu/libcryptsetup4 2:1.6.6-5ubuntu2.1
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- ubuntu/libcurl3 7.47.0-1ubuntu2.8
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- ubuntu/libedit2 3.1-20150325-1ubuntu2
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- ubuntu/libencode-locale-perl 1.05-1
- ubuntu/liberror-perl 0.17-1.2
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- ubuntu/libfakeroot 1.20.2-1ubuntu1
- ubuntu/libfdisk1 2.27.1-6ubuntu3.6
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- ubuntu/libfile-fcntllock-perl 0.22-3
- ubuntu/libfile-listing-perl 6.04-1
- ubuntu/libfile-mimeinfo-perl 0.27-1
- ubuntu/libflac8 1.3.1-4
- ubuntu/libfont-afm-perl 1.20-1
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- ubuntu/libgcc1 1:6.0.1-0ubuntu1
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- ubuntu/libgl1-mesa-dri 18.0.5-0ubuntu0~16.04.1
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- ubuntu/libheimntlm0-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
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- ubuntu/libhttp-daemon-perl 6.01-1
- ubuntu/libhttp-date-perl 6.02-1
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- ubuntu/libijs-0.35 0.35-12
- ubuntu/libio-html-perl 1.001-1
- ubuntu/libio-socket-ssl-perl 2.024-1
- ubuntu/libipc-system-simple-perl 1.25-3
- ubuntu/libisc-export160 1:9.10.3.dfsg.P4-8ubuntu1.10
- ubuntu/libisl15 0.16.1-1
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- ubuntu/libjbig0 2.1-3.1
- ubuntu/libjbig2dec0 0.12 20150918-1ubuntu0.1
- ubuntu/libjpeg-dev 8c-2ubuntu8
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- ubuntu/libjpeg8-dev 8c-2ubuntu8
- ubuntu/libjpeg8 8c-2ubuntu8
- ubuntu/libjs-jquery 1.11.3 dfsg-4
- ubuntu/libjson-c2 0.11-4ubuntu2
- ubuntu/libk5crypto3 1.13.2 dfsg-5ubuntu2
- ubuntu/libkeyutils1 1.5.9-8ubuntu1
- ubuntu/libkmod2 22-1ubuntu5
- ubuntu/libkpathsea6 2015.20160222.37495-1
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- ubuntu/libkrb5-3 1.13.2 dfsg-5ubuntu2
- ubuntu/libkrb5support0 1.13.2 dfsg-5ubuntu2
- ubuntu/liblapack-dev 3.6.0-2ubuntu2
- ubuntu/liblapack3 3.6.0-2ubuntu2
- ubuntu/liblcms2-2 2.6-3ubuntu2
- ubuntu/libldap-2.4-2 2.4.42 dfsg-2ubuntu3.3
- ubuntu/libllvm6.0 1:6.0-1ubuntu2~16.04.1
- ubuntu/liblsan0 5.4.0-6ubuntu1~16.04.10
- ubuntu/liblwp-mediatypes-perl 6.02-1
- ubuntu/liblwp-protocol-https-perl 6.06-2
- ubuntu/liblz4-1 0.0~r131-2ubuntu2
- ubuntu/liblzma-dev 5.1.1alpha 20120614-2ubuntu2
- ubuntu/liblzma5 5.1.1alpha 20120614-2ubuntu2
- ubuntu/liblzo2-2 2.08-1.2
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- Butterfly:Butterfly *
- Jaligner:Jaligner *
- US_export_policy:US_export_policy *
- charsets:charsets *
- cisd-jhdf5:cisd-jhdf5 *
- cldrdata:cldrdata *
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- com.google.guava:guava 15.0
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- com.sun:sunec 1.8.0_181
- com.sun:sunjce_provider 1.8.0_181
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- dnsns:dnsns *
- dt:dt *
- icedtea-sound:icedtea-sound *
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