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Package Usage : cran : DNAcopy

Explore the latest package usage data for DNAcopy in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 68
Total downloads: 1,194,309
Showing first 100 dependents

More details on packages.ecosyste.ms - JSON

dhspence/docker-cnvkit2 latest

now emacs enhanced!

  • version: 1.52.0
Latest release: over 7 years ago - 203 downloads - 619 dependencies
hoonbiolab/ccle-cga v0.2

  • version: 1.52.0
Latest release: about 3 years ago - 255 downloads - 586 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 1.54.0
Latest release: over 7 years ago - 443 downloads - 9,302 dependencies
zymoresearch/bio_resource_builder v1.0

  • version: 1.72.0
Latest release: over 2 years ago - 50 downloads - 335 dependencies
mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

  • version: 1.54.0
Latest release: almost 8 years ago - 52 downloads - 9,414 dependencies
chgyi/bio 3.5.1

  • version: 1.54.0
Latest release: over 7 years ago - 795 downloads - 1,077 dependencies
broadinstitute/pcawg_full 7

  • version: 1.50.1
Latest release: over 8 years ago - 548 downloads - 889 dependencies
hoonbiolab/aasuite v0.1477.3

  • version: 1.60.0
Latest release: almost 3 years ago - 1,111 downloads - 681 dependencies
andrewrrelmore/genepi_vscode test

  • version: 1.72.3
Latest release: over 2 years ago - 48 downloads - 1,188 dependencies
skchronicles/genome-seek v0.1.0

Official base image of the genome-seek pipeline: https://github.com/OpenOmics/genome-seek

  • version: 1.72.3
Latest release: almost 3 years ago - 687 downloads - 1,367 dependencies
qdidiscoveryservices/vcfcompare 1.0

  • version: 1.74.1
Latest release: over 2 years ago - 1,044 downloads - 784 dependencies
dvav/bioconductor latest

  • version: 1.74.1
Latest release: over 2 years ago - 72 downloads - 297 dependencies
prosyslab/bug-bench-cnvkit 20210806

  • version: 1.60.0
Latest release: over 4 years ago - 22 downloads - 45 dependencies
smk5g5/cnvkit latest

  • version: 1.70.0
Latest release: over 3 years ago - 26 downloads - 108 dependencies
hoonbiolab/genepattern_aa v19.1

  • version: 1.60.0
Latest release: over 3 years ago - 6 downloads - 628 dependencies
crukmi/cnvkit 0.9.9--pyhdfd78af_0_md2

  • version: 1.64.0
Latest release: over 3 years ago - 26 downloads - 47 dependencies
dhspence/docker-hiccompare latest

  • version: 1.60.0
Latest release: almost 5 years ago - 137 downloads - 1,271 dependencies
jluebeck/ampliconsuite-pipeline v1.5.0

Docker image for AmpliconSuite-pipeline. Runscripts available at https://github.com/AmpliconSuite

  • version: 1.60.0
Latest release: 4 months ago - 5,639 downloads - 320 dependencies
bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

  • version: 1.74.1, 1.72.3
Latest release: over 2 years ago - 110 downloads - 1,150 dependencies
gene110/nipt_combinereport_wcx v0

  • version: 1.52.0
Latest release: about 3 years ago - 47 downloads - 674 dependencies
skchronicles/genome-seek_trim_map v0.1.1

Official docker image for trimming and alignment with genome-seek

  • version: 1.72.3
Latest release: over 1 year ago - 510 downloads - 1,367 dependencies
jackiezhuqi/bio-rstudio latest

  • version: 1.72.3
Latest release: over 2 years ago - 94 downloads - 1,158 dependencies
gmillot/r_v4.1.2_ig_clustering_v1.1 gitlab_v9.7

https://gitlab.pasteur.fr/gmillot/dockerfiles/-/tree/v9.7

  • version: 1.68.0
Latest release: about 3 years ago - 33 downloads - 927 dependencies
zjnolen/angsd-snakemake-pipeline 0.1

  • version: 1.68.0
Latest release: almost 3 years ago - 142 downloads - 643 dependencies
ycli1995/bioinfo_dev 1.1.0

  • version: 1.74.1
Latest release: almost 2 years ago - 188 downloads - 4,337 dependencies
gmillot/r_v4.1.2_ig_clustering_v1.2 gitlab_v9.8

https://gitlab.pasteur.fr/gmillot/dockerfiles/-/tree/v9.8

  • version: 1.68.0
Latest release: about 3 years ago - 19 downloads - 928 dependencies
gene110/r3.6_ecd latest

  • version: 1.60.0
Latest release: over 4 years ago - 6 downloads - 579 dependencies
intelliseqngs/prodia_task_bam-wisecondorx 1.0.4

  • version: 1.60.0
Latest release: about 3 years ago - 119 downloads - 468 dependencies
intelliseqngs/cnvkit 1.1.0

  • version: 1.68.0
Latest release: over 2 years ago - 296 downloads - 556 dependencies
trust1/jmml latest

JMML classifier

  • version: 1.68.0
Latest release: over 3 years ago - 52 downloads - 658 dependencies
kubran/odcf_aceseqcalling v6

  • version: 1.56.0
Latest release: over 2 years ago - 148 downloads - 1,103 dependencies
dovetailg/hiccompare latest

  • version: 1.72.3
Latest release: about 3 years ago - 45 downloads - 658 dependencies
timothystephens/genotype_samples 0.0.1

  • version: 1.72.0
Latest release: almost 3 years ago - 64 downloads - 469 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 1.52.0
Latest release: over 3 years ago - 19,770 downloads - 11,684 dependencies
biocontainers/oncocnv v7.0_cv2

  • version: 1.60.0
Latest release: over 3 years ago - 12,184 downloads - 307 dependencies
biocontainers/cnvkit v0.9.5-3-deb_cv1

  • version: 1.56.0
Latest release: over 6 years ago - 9,694 downloads - 493 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 1.52.0
Latest release: almost 4 years ago - 10,964 downloads - 12,259 dependencies
hoonbiolab/cnvkit v1.1

  • version: 1.60.0
Latest release: over 4 years ago - 257 downloads - 817 dependencies
shashankti/bioc_docker v1

  • version: 1.73.0
Latest release: about 3 years ago - 52 downloads - 1,350 dependencies
nfcore/exoseq dev

A docker container for the ExoSeq pipeline

  • version: 1.54.0
Latest release: over 7 years ago - 1,263 downloads - 616 dependencies
broadinstitute/terra-jupyter-aou 2.1.13

  • version: 1.72.1
Latest release: over 3 years ago - 97,744 downloads - 4,112 dependencies
mirekphd/ml-cpu-r35-guac devel_6f33d1e

  • version: 1.54.0
Latest release: almost 8 years ago - 210 downloads - 8,551 dependencies
khoulaha/jabba v1.0.0

  • version: 1.70.0
Latest release: over 3 years ago - 78 downloads - 2,527 dependencies
mirekphd/ml-gpu-r35-cuda90 devel_00b4e38

  • version: 1.54.0
Latest release: almost 8 years ago - 82 downloads - 9,405 dependencies
crukmi/mesa_dependencies latest

  • version: 1.72.3
Latest release: about 3 years ago - 84 downloads - 1,393 dependencies
trust1/rbox v1

Methylation array work toolbox

  • version: 1.64.0
Latest release: almost 3 years ago - 69 downloads - 912 dependencies
mirekphd/ml-cpu-r36-rs 20200131

  • version: 1.52.0, 1.60.0
Latest release: about 6 years ago - 71 downloads - 10,669 dependencies
etretiakov/workbench-session-complete jammy-2024.09.19-custom-12.9

  • version: 1.74.1
Latest release: over 1 year ago - 1,247 downloads - 6,961 dependencies
wnse/cnv_ana latest

  • version: 1.60.0
Latest release: about 3 years ago - 50 downloads - 321 dependencies
dhspence/docker-cnvkit latest

  • version: 1.44.0
Latest release: about 8 years ago - 118 downloads - 542 dependencies
jamestemple/meffil_image version1

  • version: 1.74.1
Latest release: over 2 years ago - 27 downloads - 900 dependencies
broadinstitute/pcawg_tokens latest

  • version: 1.46.0
Latest release: over 9 years ago - 328 downloads - 1,472 dependencies
mirekphd/ml-cpu-r35-rdp 20180918

  • version: 1.54.0
Latest release: over 7 years ago - 325 downloads - 9,486 dependencies
mirekphd/ml-cpu-r35-rs 20190201

  • version: 1.54.0
Latest release: about 7 years ago - 1,744 downloads - 9,716 dependencies
crukmi/mesa main

  • version: 1.71.0
Latest release: over 3 years ago - 195 downloads - 1,326 dependencies
gene110/reportnipt550 latest

  • version: 1.60.0
Latest release: almost 5 years ago - 131 downloads - 577 dependencies
chunjiesamliu/scmocha latest

  • version: 1.74.1
Latest release: over 2 years ago - 100 downloads - 1,258 dependencies
intelliseqngs/wisecondorx 1.0.0

  • version: 1.60.0
Latest release: about 5 years ago - 31 downloads - 48 dependencies
etretiakov/rocker-session latest

  • version: 1.74.1
Latest release: almost 3 years ago - 81 downloads - 2,565 dependencies
duclare123/vizcnv_dev latest

Visualization tool for WGS analysis

  • version: 1.72.3
Latest release: almost 3 years ago - 130 downloads - 920 dependencies
gene110/nipt_report latest

  • version: 1.52.0
Latest release: almost 5 years ago - 858 downloads - 676 dependencies
trust1/bethesda light

Brain tumor BethesdaV2 and EPIC (Bethesda v1) classifier box

  • version: 1.64.0
Latest release: over 2 years ago - 38 downloads - 840 dependencies
nfcore/sarek 2.7.2

A Docker container for the nf-core/sarek pipeline

  • version: 1.64.0
Latest release: almost 4 years ago - 1,076,349 downloads - 607 dependencies
skchronicles/genome-seek_hla v0.1.0

Official docker image for HLA typing steps in genome-seek

  • version: 1.72.3
Latest release: almost 3 years ago - 222 downloads - 1,722 dependencies
biocontainers/bioconductor-dnacopy v1.48.0-1-deb_cv1

  • version: 1.48.0
Latest release: almost 8 years ago - 551 downloads - 388 dependencies
datashield/rock-dolomite-xenon 2.1.1

This DataSHIELD profile consists of the platform 'dolomite' and the profile 'xenon'.

  • version: 1.74.1
Latest release: almost 2 years ago - 1,707 downloads - 1,410 dependencies
mirekphd/ml-cpu-r35-jnb devel_2b2752c

  • version: 1.54.0
Latest release: almost 8 years ago - 452 downloads - 9,222 dependencies
broadinstitute/pcawg_broad_wgs_variant_callers mutect_2percent_floor

pcawg_broad_wgs_variant_callers

  • version: 1.52.0
Latest release: about 8 years ago - 582 downloads - 865 dependencies
intelliseqngs/task_bam-wisecondorx 1.0.0

  • version: 1.60.0
Latest release: about 5 years ago - 270 downloads - 471 dependencies
jlund256/rna_variants latest

  • version: 1.64.0
Latest release: over 2 years ago - 1,343 downloads - 752 dependencies