Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : maven : org.apache.commons:commons-jexl

Explore the latest package usage data for org.apache.commons:commons-jexl in the maven ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 812
Total downloads: 100,723,274

More details on packages.ecosyste.ms - JSON

broadinstitute/genomes-in-the-cloud 2.4.0-1501007820

Genomes-in-the-cloud is a genomic analysis pipeline project developed by the Broad Institute.

  • version: 2.1.1
Latest release: about 7 years ago - 40,948,348 downloads - 951 dependencies
broadinstitute/gatk 4.5.0.0

Official release repository for GATK versions 4.x

  • version: 2.1.1
Latest release: 9 months ago - 31,988,536 downloads - 912 dependencies
openshift/jenkins-slave-maven-centos7 v3.11

A Jenkins slave image with OpenJDK 1.8 and Maven 3.x included.

  • version: 2.1.1
Latest release: over 4 years ago - 6,163,446 downloads - 1,802 dependencies
library/nuxeo latest

DEPRECATED; contact Nuxeo for support/updates

  • version: 2.0.1
Latest release: about 3 years ago - 5,011,690 downloads - 1,181 dependencies
openshift/jenkins-agent-maven-35-centos7 v3.11

A Jenkins slave image with OpenJDK 1.8 and Maven 3.5 included. DEPRECATED: see below

  • version: 2.1.1
Latest release: over 4 years ago - 3,757,966 downloads - 1,657 dependencies
decho/jmeter-slave latest

  • version: 2.1.1
Latest release: over 1 year ago - 1,584,061 downloads - 343 dependencies
vinsdocker/jmserver latest

  • version: 2.1.1
Latest release: over 6 years ago - 1,547,082 downloads - 262 dependencies
broadinstitute/gatk3 3.8-1

Official release repository for GATK versions 3.x

  • version: 2.1.1
Latest release: over 6 years ago - 1,387,112 downloads - 498 dependencies
broadinstitute/broadmutationcalling_beta latest

Broad Mutation Calling BETA Repository

  • version: 2.1.1
Latest release: about 7 years ago - 1,035,904 downloads - 449 dependencies
broadinstitute/picard 3.1.1

A set of Java command line tools for manipulating high-throughput sequencing (HTS) data and formats.

  • version: 2.1.1
Latest release: 10 months ago - 1,091,512 downloads - 640 dependencies
splatform/google-stackdriver-debugger latest

  • version: 2.1.1
Latest release: over 5 years ago - 922,562 downloads - 1,155 dependencies
probablyfine/flume latest

Self-contained Docker image containing Java and Apache Flume

  • version: 2.1.1
Latest release: about 6 years ago - 866,051 downloads - 248 dependencies
scality/ironman-base master

Base image for all IronMan containers

  • version: 2.1.1
Latest release: over 7 years ago - 314,318 downloads - 1,305 dependencies
broadinstitute/gtex_rnaseq V10pg

GTEx RNA-seq pipeline: alignment (STAR), QC (RNA-SeQC), expression quantification (RSEM & RNA-SeQC)

  • version: 2.1.1
Latest release: 10 months ago - 276,171 downloads - 914 dependencies
biocontainers/picard-tools v2.18.25dfsg-2-deb_cv1

  • version: 2.1.1
Latest release: almost 5 years ago - 208,967 downloads - 711 dependencies
jamesdbloom/docker-java8-maven latest

Docker container for Java 1.8 and Maven 3.1.1

  • version: 2.1.1
Latest release: almost 7 years ago - 179,247 downloads - 857 dependencies
vinsdocker/jmmaster 3.3

  • version: 2.1.1
Latest release: over 6 years ago - 169,980 downloads - 262 dependencies
broadinstitute/viral-core latest

  • version: 2.1.1
Latest release: over 4 years ago - 151,955 downloads - 419 dependencies
maauso/zkui beta

zkui - Zookeeper UI Dashboard

  • version: 2.1.1
Latest release: almost 8 years ago - 129,797 downloads - 937 dependencies
broadinstitute/terra-jupyter-aou 8bf6b13

  • version: 2.1.1
Latest release: almost 2 years ago - 92,816 downloads - 4,112 dependencies
nfcore/methylseq dev

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel.

  • version: 2.1.1
Latest release: about 3 years ago - 92,677 downloads - 297 dependencies
broadinstitute/gatk-nightly 2024-01-06-4.5.0.0-3-gb68fadc5f-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

  • version: 2.1.1
Latest release: 8 months ago - 86,066 downloads - 912 dependencies
alpine/jmeter 5.6.1

run jmeter in Docker

  • version: 2.1.1
Latest release: about 1 year ago - 91,028 downloads - 193 dependencies
vanallenlab/sv-pipeline-base gnomad_rf_abd6c1

  • version: 2.1.1
Latest release: over 1 year ago - 88,219 downloads - 1,101 dependencies
nfcore/atacseq latest

A Docker container for the nf-core/atacseq pipeline.

  • version: 2.1.1
Latest release: over 2 years ago - 54,429 downloads - 352 dependencies
confluentinc/cp-kafka-streams-examples 3.3.0

CP Kafka Streams examples in https://github.com/confluentinc/examples/tree/master/kafka-streams

  • version: 2.1.1
Latest release: about 7 years ago - 45,911 downloads - 1,067 dependencies
bde2020/hdfs-filebrowser latest

HDFS FileBrowser from Cloudera Hue.

  • version: 2.1.1
Latest release: over 6 years ago - 47,568 downloads - 1,740 dependencies
jamesdbloom/docker-java7-maven latest

Docker container for Java 1.7 and Maven 3.1.1

  • version: 2.1.1
Latest release: almost 7 years ago - 39,454 downloads - 843 dependencies
nfcore/eager 2.5.0

A Docker image for the nf-core/eager pipeline.

  • version: 2.1.1
Latest release: 10 months ago - 40,624 downloads - 738 dependencies
biocontainers/picard v1.139_cv3

Java CLI tools for manipulating HTS data and formats

  • version: 2.1.1
Latest release: over 5 years ago - 38,954 downloads - 386 dependencies
broadinstitute/viral-ngs latest

See: https://viral-ngs.readthedocs.io/en/latest/

  • version: 2.1.1
Latest release: over 4 years ago - 24,573 downloads - 417 dependencies
vinsdocker/jmawsserver latest

  • version: 2.1.1
Latest release: over 6 years ago - 22,331 downloads - 262 dependencies
nfcore/rnafusion fusioninspector_2.8.0dev

A Docker image for the nf-core/rnafusion pipeline.

  • version: 2.1.1
Latest release: about 2 years ago - 24,036 downloads - 1,302 dependencies
dhspence/docker-genomic-analysis 122121

From Chris Miller's example

  • version: 2.1.1
Latest release: over 2 years ago - 19,678 downloads - 1,294 dependencies
hauptmedia/jmeter latest

  • version: 2.1.1
Latest release: about 7 years ago - 17,304 downloads - 973 dependencies
harisekhon/nifi 0.7

Apache Nifi (tags 0.2 - 1.8)

  • version: 2.1.1
Latest release: over 4 years ago - 15,650 downloads - 808 dependencies
reactioncommerce/reaction-loadtest-taurus latest

Runs Taurus/JMeter tests.

  • version: 2.1.1
Latest release: about 6 years ago - 15,387 downloads - 1,626 dependencies
ballerina/perf_base_container latest

  • version: 2.1.1
Latest release: almost 2 years ago - 17,220 downloads - 388 dependencies
vanallenlab/sv-pipeline filter_gt_029fa3b

  • version: 2.1.1
Latest release: about 1 year ago - 22,757 downloads - 1,231 dependencies
biocontainers/beagle v5.0-180928dfsg-1-deb_cv1

  • version: 2.1.1
Latest release: about 5 years ago - 9,481 downloads - 533 dependencies
biocontainers/artemis v17.0.1dfsg-2-deb_cv1

  • version: 2.1.1
Latest release: about 5 years ago - 9,505 downloads - 887 dependencies
edxops/analytics_pipeline lilac.master

  • version: 2.1.1
Latest release: almost 2 years ago - 9,716 downloads - 1,814 dependencies
rmohr/ovirt-engine latest

Dockerized version of ovirt-engine, the management part of oVirt.

  • version: 2.1.1
Latest release: almost 8 years ago - 8,922 downloads - 1,118 dependencies
biocontainers/unicycler v0.4.7dfsg-2-deb_cv1

  • version: 2.1.1
Latest release: almost 5 years ago - 8,525 downloads - 703 dependencies
biocontainers/chromhmm v1.18dfsg-1-deb_cv1

  • version: 2.1.1
Latest release: about 5 years ago - 8,427 downloads - 587 dependencies
lazzurs/jmeter 5.2

JMeter container based on OpenJDK:8

  • version: 2.1.1
Latest release: over 3 years ago - 8,426 downloads - 326 dependencies
wso2/kubernetes-pipeline-jenkins 1.1.0

  • version: 2.1.1
Latest release: almost 4 years ago - 8,014 downloads - 1,273 dependencies
biocontainers/pilon v1.23dfsg-1-deb_cv1

  • version: 2.1.1
Latest release: almost 5 years ago - 8,128 downloads - 469 dependencies
izone/hadoop ecosystem

Hadoop 2.8.5 Ecosystem fully distributed, Jupyter Notebook, RStudio Server, Julia, jdbc implement

  • version: 2.1.1
Latest release: almost 6 years ago - 7,941 downloads - 2,460 dependencies
biocontainers/paleomix v1.2.13.3-1-deb_cv1

  • version: 2.1.1
Latest release: almost 5 years ago - 7,507 downloads - 1,167 dependencies
biocontainers/surankco v0.0.r5dfsg-2-deb_cv1

  • version: 2.1.1
Latest release: almost 5 years ago - 7,465 downloads - 857 dependencies
dhspence/docker-walker latest

Haley's GATK

  • version: 2.1.1, *
Latest release: over 5 years ago - 7,359 downloads - 541 dependencies
asappinc/alpine_jmxtools e30c081f82e6e13f21ed00ede6313b38d83f1d96

  • version: 2.1.1
Latest release: 10 months ago - 7,590 downloads - 96 dependencies
asappinc/ubuntu_jmxtools 9b10e9eaa19e109de133f45dce9f009f094c87bb

  • version: 2.1.1
Latest release: 9 months ago - 7,721 downloads - 380 dependencies
broadinstitute/gatk-dev NVSCOREVARIANTS-PREVIEW-SNAPSHOT

GATK Development

  • version: 2.1.1
Latest release: almost 2 years ago - 6,653 downloads - 752 dependencies
arm64v8/nuxeo latest

DEPRECATED; contact Nuxeo for support/updates

  • version: 2.0.1
Latest release: over 5 years ago - 5,875 downloads - 1,165 dependencies
broadinstitute/viral-assemble latest

  • version: 2.1.1
Latest release: over 4 years ago - 4,464 downloads - 431 dependencies
broadinstitute/viral-phylo 2.0.21.5

  • version: 2.1.1
Latest release: over 4 years ago - 4,426 downloads - 431 dependencies
dhspence/docker-trimgalore latest

trimgalore, cutadapt, on top of docker-genomic-analysis

  • version: 2.1.1
Latest release: over 5 years ago - 3,649 downloads - 733 dependencies
dhspence/docker-amplicon-readcount latest

GATK plus custom annotation script

  • version: 2.1.1
Latest release: about 7 years ago - 3,595 downloads - 716 dependencies
luisas/samtools latest

  • version: 2.1.1
Latest release: over 6 years ago - 3,554 downloads - 342 dependencies
sgioia/fso-finance-runner 1-arm64

  • version: 2.1.1
Latest release: about 2 years ago - 3,479 downloads - 351 dependencies
dhspence/docker-spikein v1.1

  • version: 2.1.1
Latest release: almost 6 years ago - 3,239 downloads - 729 dependencies
nfcore/deepvariant dev

A Docker image for the nf-core/deepvariant pipeline.

  • version: 2.1.1
Latest release: over 5 years ago - 3,749 downloads - 234 dependencies
bidlogixteam/utility-deluge 558

  • version: 2.1.1
Latest release: 9 months ago - 3,905 downloads - 359 dependencies
gesiscss/binder-serhatcevikel-2dbdm-5f2019-e7b363 1239175be24a02ff0e1bcd30f865011dc1fca7d4

  • version: 2.1.1
Latest release: almost 4 years ago - 2,479 downloads - 2,536 dependencies
bactopia/call_variants 2.2.0

  • version: 2.1.1
Latest release: almost 2 years ago - 2,695 downloads - 174 dependencies
sgioia/fso-healthcare-roadrunner 6

  • version: 2.1.1
Latest release: over 2 years ago - 2,370 downloads - 469 dependencies
broadinstitute/terra-jupyter-gatk 8444561

  • version: 2.1.1
Latest release: over 4 years ago - 2,239 downloads - 3,913 dependencies
decho/jmeter-base latest

  • version: 2.1.1
Latest release: over 1 year ago - 2,597 downloads - 350 dependencies
sgioia/fso-travel-roadrunner 2

  • version: 2.1.1
Latest release: over 2 years ago - 1,992 downloads - 469 dependencies
dhspence/docker-bisulfite latest

Forked from Chris Miller's docker image

  • version: 2.1.1
Latest release: almost 6 years ago - 1,968 downloads - 650 dependencies
dhspence/docker-biscuit latest

  • version: 2.1.1
Latest release: over 5 years ago - 1,935 downloads - 807 dependencies
dhspence/docker-star latest

STAR plus helper script plus samtools

  • version: 2.1.1
Latest release: over 6 years ago - 1,972 downloads - 729 dependencies
dhspence/docker-haloplexqc latest

Haloplex QC scripts

  • version: 2.1.1
Latest release: almost 7 years ago - 1,801 downloads - 730 dependencies
qdidiscoveryservices/bwa_samtools_biobambam2 latest

  • version: 2.1.1
Latest release: over 3 years ago - 1,678 downloads - 1,561 dependencies
broadinstitute/fungal_gatk4 latest

  • version: 2.1.1
Latest release: over 2 years ago - 16,447 downloads - 942 dependencies
g8tax/exp-generic-traccar default--at-20220512-235900

  • version: 2.1.1
Latest release: over 2 years ago - 1,600 downloads - 267 dependencies
dhspence/docker-macs2 latest

  • version: 2.1.1
Latest release: about 6 years ago - 1,767 downloads - 730 dependencies
vinsdocker/jmbase latest

  • version: 2.1.1
Latest release: over 6 years ago - 1,527 downloads - 262 dependencies