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Docker

An open API service providing dependency metadata for docker images.

Package Usage : cran : permute

Explore the latest package usage data for permute in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 163
Total downloads: 989,582

More details on packages.ecosyste.ms - JSON

veupathdb/rserve 8.2.2

  • version: 0.9-7
Latest release: 5 months ago - 627,414 downloads - 550 dependencies
broadinstitute/terra-jupyter-aou 2.1.13

  • version: 0.9-7
Latest release: over 2 years ago - 96,569 downloads - 4,112 dependencies
rocker/ropensci 3.4.1

  • version: 0.9-4
Latest release: almost 8 years ago - 88,799 downloads - 1,589 dependencies
mirekphd/ml-cpu-r40-rs-cust 20230912

  • version: 0.9-7
Latest release: almost 2 years ago - 28,089 downloads - 10,962 dependencies
dhspence/docker-genomic-analysis 122121

From Chris Miller's example

  • version: 0.9-5
Latest release: over 3 years ago - 19,986 downloads - 1,294 dependencies
mirekphd/ml-cpu-r36-rs-cust latest

  • version: 0.9-7
Latest release: about 3 years ago - 17,819 downloads - 11,684 dependencies
nfcore/ampliseq 1.2.0

A Docker image for nf-core/ampliseq.

  • version: 0.9-5
Latest release: over 4 years ago - 10,699 downloads - 331 dependencies
mirekphd/ml-cpu-r36-base latest

  • version: 0.9-7
Latest release: about 3 years ago - 9,814 downloads - 12,259 dependencies
kbase/kbase sdkbase.latest

  • version: 0.8-4
Latest release: over 7 years ago - 4,321 downloads - 2,934 dependencies
dhspence/docker-biscuit latest

  • version: 0.9-4
Latest release: over 6 years ago - 1,963 downloads - 807 dependencies
prismcmap/reports v0.3.0

  • version: 0.9-7
Latest release: almost 2 years ago - 19,203 downloads - 1,108 dependencies
mirekphd/ml-cpu-r35-rs 20190201

  • version: 0.9-4
Latest release: over 6 years ago - 1,359 downloads - 9,716 dependencies
kbase/kbase_base latest

KBase Base Image containing Core services and runtime

  • version: 0.8-4
Latest release: over 8 years ago - 644 downloads - 3,106 dependencies
kbase/sdkbase latest

  • version: 0.8-4
Latest release: over 8 years ago - 497 downloads - 2,934 dependencies
dhspence/docker-sicer latest

  • version: 0.9-4
Latest release: over 6 years ago - 789 downloads - 1,147 dependencies
qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 0.9-7
Latest release: over 1 year ago - 3,981 downloads - 1,464 dependencies
cristaniguti/onemap_git 2.8.0

R package to build linkage map for outcrossing, F2, backcross and RILs populations

  • version: 0.9-5
Latest release: about 3 years ago - 388 downloads - 1,581 dependencies
dhspence/docker-basestation latest

  • version: 0.9-4
Latest release: over 6 years ago - 347 downloads - 1,132 dependencies
qdidiscoveryservices/py3_cellranger 6.1.2

  • version: 0.9-5
Latest release: over 3 years ago - 343 downloads - 1,375 dependencies
veitveit/complexbrowser release-1.6

  • version: 0.9-7
Latest release: over 1 year ago - 679 downloads - 1,296 dependencies
mirekphd/ml-cpu-r35-jnb devel_2b2752c

  • version: 0.9-4
Latest release: about 7 years ago - 364 downloads - 9,222 dependencies
dhspence/docker-dss latest

  • version: 0.9-5
Latest release: almost 5 years ago - 392 downloads - 1,127 dependencies
koki/biocdev 20230818

  • version: 0.9-7
Latest release: almost 2 years ago - 301 downloads - 1,504 dependencies
chgyi/bio 3.5.1

  • version: 0.9-4
Latest release: almost 7 years ago - 531 downloads - 1,077 dependencies
biocontainers/bioconductor-phyloseq v1.19.1-2-deb_cv1

  • version: 0.9-4
Latest release: about 7 years ago - 149 downloads - 485 dependencies
mirekphd/ml-cpu-r35-nx devel_fdbf539

  • version: 0.9-4
Latest release: about 7 years ago - 357 downloads - 9,302 dependencies
dhspence/docker-manta 1.5.0

  • version: 0.9-4
Latest release: over 6 years ago - 180 downloads - 1,191 dependencies
dhspence/docker-hiccompare latest

  • version: 0.9-5
Latest release: about 4 years ago - 126 downloads - 1,271 dependencies
mirekphd/ml-cpu-r35-rdp 20180918

  • version: 0.9-4
Latest release: almost 7 years ago - 230 downloads - 9,486 dependencies
iandennismiller/analyzer latest

Contains Python, Gephi, and RStudio Desktop. Based on /r/iandennismiller/vnc-desktop

  • version: 0.9-5
Latest release: over 6 years ago - 138 downloads - 2,327 dependencies
theoaphidian/kraken-bracken latest

A container with all the tools to preprocess metagenome samples with kraken and bracken.

  • version: 0.9-7
Latest release: over 2 years ago - 166 downloads - 345 dependencies
dhspence/docker-vep 93

  • version: 0.9-4
Latest release: over 6 years ago - 73 downloads - 1,191 dependencies
mirekphd/ml-cpu-r35-guac devel_6f33d1e

  • version: 0.9-4
Latest release: about 7 years ago - 136 downloads - 8,551 dependencies
mbwali/jupyterlab qiime2023

  • version: 0.9-7
Latest release: about 2 years ago - 61 downloads - 1,941 dependencies
mirekphd/ml-gpu-r35-cuda90 devel_00b4e38

  • version: 0.9-4
Latest release: about 7 years ago - 76 downloads - 9,405 dependencies
lukasjirinovak/paqvalidation latest

Materials necessary to fully reproduce results of the validation of Perth Alexithymia Questionnaire

  • version: 0.9-7
Latest release: over 2 years ago - 67 downloads - 747 dependencies
mirekphd/ml-cpu-r36-rs 20200131

  • version: 0.9-5
Latest release: over 5 years ago - 68 downloads - 10,669 dependencies
gesiscss/binder-uw-2dmadison-2ddatascience-2dotu-2dvignette-f2459f 84607c79642d786c08b1d37ac66e84d6d35b38de

  • version: 0.9-5
Latest release: over 5 years ago - 55 downloads - 2,082 dependencies
biocontainers/ecomet phenomenal-v1.1_cv0.3.39

  • version: 0.9-4
Latest release: about 7 years ago - 72 downloads - 647 dependencies
mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

  • version: 0.9-4
Latest release: about 7 years ago - 40 downloads - 9,414 dependencies
evolbioinfo/treewas v1.0

A phylogenetic tree-based approach to genome-wide association studies in microbes

  • version: 0.9-5
Latest release: about 6 years ago - 34 downloads - 858 dependencies
alanocallaghan/high-dimensional-stats-r latest

  • version: 0.9-7
Latest release: over 2 years ago - 106 downloads - 1,601 dependencies
chgyi/qiime2 23.09

  • version: 0.9-5
Latest release: over 1 year ago - 47 downloads - 271 dependencies
haileyzhang/lfq-analyst v1.2.6

A docker container for LFQ-Analyst

  • version: 0.9-7
Latest release: over 1 year ago - 259 downloads - 1,496 dependencies
etretiakov/workbench-session-complete jammy-2024.09.19-custom-12.9

  • version: 0.9-7
Latest release: 10 months ago - 861 downloads - 6,961 dependencies
kaizhang/scatac-bench 0.2.1

  • version: 0.9-7
Latest release: almost 2 years ago - 432 downloads - 588 dependencies
ylebras/neal-docker 2022

  • version: 0.9-7
Latest release: over 2 years ago - 74 downloads - 2,038 dependencies
haileyzhang/fragpipe-analyst v1.11

A Docker container of Fragpipe-Analyst

  • version: 0.9-7
Latest release: 5 months ago - 197 downloads - 1,511 dependencies
plaquette/r_helper rbase

helper repo to use certain r packages on a computing node

  • version: 0.9-7
Latest release: 9 months ago - 76 downloads - 260 dependencies
dhspence/docker-wg-basestation latest

  • version: 0.9-5
Latest release: over 4 years ago - 53 downloads - 1,126 dependencies
byjin/sqtl 2.0

r docker for sqtl-seeker2( try )

  • version: 0.9-7
Latest release: over 2 years ago - 45 downloads - 557 dependencies
qdidiscoveryservices/sc_pip_r_and_py latest

  • version: 0.9-5
Latest release: over 4 years ago - 14 downloads - 1,097 dependencies
sebrauschert/amplicon_pipeline v0.3.2

A pipeline for amplicon sequencing analysis of marine fish

  • version: 0.9-7
Latest release: about 2 years ago - 158 downloads - 571 dependencies
haileyzhang/phospho-analyst v1.0.2

  • version: 0.9-7
Latest release: over 1 year ago - 183 downloads - 796 dependencies
albertea/numbat_light 02

  • version: 0.9-7
Latest release: about 2 years ago - 125 downloads - 301 dependencies
qdidiscoveryservices/cellranger7.1.0_py3_r4 latest

  • version: 0.9-7
Latest release: over 2 years ago - 43 downloads - 1,029 dependencies
crpeters/r-methylkit 4.2.1

  • version: 0.9-7
Latest release: over 2 years ago - 48 downloads - 383 dependencies
gesiscss/binder-mortonjt-2dq2stats-2dworkshops-912d21 82c8b562545acab37a854f097c33806fa7c2a4b3

  • version: 0.9-5
Latest release: over 4 years ago - 24 downloads - 1,679 dependencies
eduar2/cami latest

  • version: 0.9-7
Latest release: over 2 years ago - 26 downloads - 211 dependencies
denglab/vpfkit_base latest

  • version: 0.9-7
Latest release: over 2 years ago - 24 downloads - 1,089 dependencies
shiramaty/qiime2-sratools latest

  • version: 0.9-7
Latest release: over 2 years ago - 22 downloads - 319 dependencies
qdidiscoveryservices/flower v3

  • version: 0.9-7
Latest release: over 2 years ago - 44 downloads - 1,066 dependencies
veitveit/omicsq latest

  • version: 0.9-7
Latest release: over 2 years ago - 81 downloads - 887 dependencies
bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

  • version: 0.9-7
Latest release: over 1 year ago - 110 downloads - 1,150 dependencies
philipp02/pathway v1

  • version: 0.9-7
Latest release: over 2 years ago - 25 downloads - 345 dependencies
apollodorus/polyglot v1

  • version: 0.9-7
Latest release: over 2 years ago - 54 downloads - 428 dependencies
weishwu/nanomethphase 1.2.0

  • version: 0.9-7
Latest release: over 2 years ago - 49 downloads - 1,274 dependencies
yumyai/libmiome 0.0.1

Microbiome library

  • version: 0.9-7
Latest release: over 2 years ago - 55 downloads - 529 dependencies
sebimer/samba-v4-qiime2 2024.2

  • version: 0.9-7
Latest release: over 1 year ago - 117 downloads - 583 dependencies
emersonchao/dsc180b latest

  • version: 0.9-7
Latest release: over 2 years ago - 57 downloads - 2,266 dependencies
ethill/qiime2 latest

docker container for qiime2

  • version: 0.9-7
Latest release: over 2 years ago - 18 downloads - 1,935 dependencies
codechenx/mice_aspergillus_infection_lung_project latest

  • version: 0.9-7
Latest release: over 2 years ago - 95 downloads - 427 dependencies
kbase/rast_base 1.9.1

  • version: 0.8-4
Latest release: over 3 years ago - 42 downloads - 2,027 dependencies
gesiscss/binder-ngs-2ddocs-2d2018-2dggg201a-e01a75 18ae0fd4cd73f6d612f276af6afe6fdd663e2724

  • version: 0.9-4
Latest release: over 5 years ago - 12 downloads - 1,554 dependencies
jenfisher7/rstudio_sbae latest

  • version: 0.9-7
Latest release: over 2 years ago - 25 downloads - 1,604 dependencies
kumalpha/qiime2-core latest

  • version: 0.9-5
Latest release: over 2 years ago - 31 downloads - 420 dependencies
mziemann/meth_analysis latest

Based on BioC release 3.14, this image is designed for analysis of infinium methylation array data

  • version: 0.9-7
Latest release: over 2 years ago - 9 downloads - 1,347 dependencies
ntobias85/abe_repo rbuild_reports_1.0.1

  • version: 0.9-7
Latest release: about 1 year ago - 60 downloads - 1,339 dependencies
sebimer/samba-v4-picrust2 2.5.1

  • version: 0.9-7
Latest release: over 2 years ago - 76 downloads - 183 dependencies
jordanwhitlock/setbp1_manuscript_panda_1.0.1 latest

  • version: 0.9-7
Latest release: about 2 years ago - 40 downloads - 1,720 dependencies
madhavsub/rstudio latestseurat

  • version: 0.9-7
Latest release: over 2 years ago - 36 downloads - 774 dependencies
danhumassmed/debrowser 1.0.1

Software for Bioinformatics pipelines DEBrowser

  • version: 0.9-7
Latest release: about 2 years ago - 32 downloads - 1,319 dependencies
compbiocore/jupyterhub-docker-images-jh_image 20230524

  • version: 0.9-7
Latest release: about 2 years ago - 101 downloads - 3,115 dependencies
weishwu/diffbind 3.6.5

  • version: 0.9-7
Latest release: over 2 years ago - 27 downloads - 1,507 dependencies
wlc27/dcanr v1

  • version: 0.9-7
Latest release: over 2 years ago - 63 downloads - 1,681 dependencies
dlopezl/wallace 2.0.5

  • version: 0.9-7
Latest release: about 2 years ago - 25 downloads - 1,177 dependencies
matzieb/shiny-4.0.3-seurat4-spatial latest

  • version: 0.9-7
Latest release: about 2 years ago - 19 downloads - 1,061 dependencies
cgwyx/easymicrobiomer latest

The best practice for microbiome analysis using R

  • version: 0.9-7
Latest release: about 2 years ago - 44 downloads - 1,604 dependencies
wesdorp/aws_dna latest

  • version: 0.9-7
Latest release: over 2 years ago - 16 downloads - 563 dependencies
codechenx/nafld_500_data latest

  • version: 0.9-7
Latest release: about 2 years ago - 47 downloads - 1,346 dependencies
gesiscss/binder-r2d-g5b5b759-sedv8808-2dcurrentworkshopsii-9981e5 50a245acdfdc95aea7fb85aaebc05c6cf9a62e36

  • version: 0.9-7
Latest release: about 2 years ago - 23 downloads - 2,585 dependencies
gesiscss/binder-r2d-g5b5b759-natpombubpa-2damptk-5f1-2e5-2e4-904cbc b7b2357f6670556e582166033b738136fa103199

  • version: 0.9-7
Latest release: about 2 years ago - 44 downloads - 1,700 dependencies
venkatk89/sci-vcf latest

  • version: 0.9-7
Latest release: about 2 years ago - 213 downloads - 840 dependencies
cbgr/cager261 1.4

Container for the CAGEr tool version 2.6.1.

  • version: 0.9-7
Latest release: over 1 year ago - 58 downloads - 1,356 dependencies
weizhoujp/r-chtc-v1 latest

  • version: 0.9-7
Latest release: about 2 years ago - 5 downloads - 724 dependencies
gesiscss/binder-r2d-g5b5b759-angrymaciek-2dwarlock-dd4b2f 171be4344adc7c915c3510067c8028206ce20f7c

  • version: 0.9-7
Latest release: about 1 year ago - 64 downloads - 2,173 dependencies