robertplayer/scidap-qiime2 stable

qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

lukasjirinovak/paqvalidation latest

Materials necessary to fully reproduce results of the validation of Perth Alexithymia Questionnaire

genular/base_image 2.0.0

Base image used in PADNORA - https://github.com/genular/pandora

weizhoujp/rchtc 4.3.0

globusgenomics/picrust 1.0

iandennismiller/analyzer latest

Contains Python, Gephi, and RStudio Desktop. Based on /r/iandennismiller/vnc-desktop

rocker/ropensci 3.4.1

mirekphd/ml-cpu-r35-nx devel_fdbf539

frankfeng78/slkb-base 1.0.3

sebrauschert/amplicon_pipeline v0.3.2

A pipeline for amplicon sequencing analysis of marine fish

nciccbr/ccbr_r_4.3.0 v1

nathanprovin/cellcom 1.2.2

matzieb/shiny-4.0.3-seurat4-spatial latest

ipbhalle/biobyte latest

mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157

haileyzhang/phospho-analyst v1.0.2

alanocallaghan/high-dimensional-stats-r latest

chgyi/bio 3.5.1

commander121/rmarkdown 4.4.0d-b4

haileyzhang/lfq-analyst v1.2.6

A docker container for LFQ-Analyst

theoaphidian/kraken-bracken latest

A container with all the tools to preprocess metagenome samples with kraken and bracken.

biocontainers/bioconductor-phyloseq v1.19.1-2-deb_cv1

bac3/microbiome latest

16S rRNA gene meta-barcoding NGS data analysis app - microbioma batterico. App streamlit.

cgwyx/easymicrobiomer latest

The best practice for microbiome analysis using R

dockerxialab/expressanalyst_docker 1.31

Perform raw RNA-seq processing (FASTQ to counts table) using the ExpressAnalyst interface.

fallingstar10/hbsigrocker latest

avi156/rocker-binder-upd 4.2.2

dhspence/docker-manta 1.5.0

genular/pandora 2.0.0

PANDORA - https://pandora.atomic-lab.org

albertea/numbat_light 02

andrewatmp/qiime_unzip latest

dhspence/docker-rstudio-python latest

crpeters/r-methylkit 4.2.1

ethill/qiime2 latest

docker container for qiime2

stefanucciluca/tregopathies latest

gesiscss/binder-mortonjt-2dq2stats-2dworkshops-912d21 82c8b562545acab37a854f097c33806fa7c2a4b3

biocorecrg/microbiomeprofile 0.4

etycksen/sc_deluxe 0.7

Docker for Seurat5 and related scRNA-seq packages as well as ScanPy, SquidPy, and scvi-tools.

kaizhang/scatac-bench 0.2.1

etretiakov/workbench-session-complete jammy-2024.09.19-custom-12.9

eduar2/cami latest

emersonchao/dsc180b latest

shiramaty/qiime2-sratools latest

lorentzb/srs 2.0

qdidiscoveryservices/flower v3

philipp02/pathway v1

biomehub/encodestatsbase 0.0.6

Basic docker image used as a base for EncodeStats.

apollodorus/polyglot v1

gevrony/hidef-seq 3.0

jlphillips/csci 2025-08-08-p2

MTSU Department of Computer Science Stack

pecan/depends 4.0.2

Image that contains all the required external packages needed for PEcAn.

yosuketanigawa/rstudio_yt latest

espirado/slurm.worker 23.02

muhengliao/r_docker2 genome

dhspence/docker-hiccompare latest

madscort/rds latest

sebimer/samba-v4-qiime2 2024.2

evolbioinfo/treewas v1.0

A phylogenetic tree-based approach to genome-wide association studies in microbes

weishwu/nanomethphase 1.2.0

bioedge/edge_24_1_ubuntu18 20250922

jenfisher7/rstudio_sbae latest

bakeronit/rstudio_hpc_cancer 0.1.3

rocker-rstudio with some R packages installed in cancer genomic analysis

chgyi/qiime2 23.09

kumalpha/qiime2-core latest

digitalproteomes/mh_class 2023

danhumassmed/debrowser 1.0.1

Software for Bioinformatics pipelines DEBrowser

jackiezhuqi/bio-rstudio latest

mziemann/meth_analysis latest

Based on BioC release 3.14, this image is designed for analysis of infinium methylation array data

sebimer/samba-v4-picrust2 2.5.1

plaquette/r_helper rbase

helper repo to use certain r packages on a computing node

cgrlab/qiime2 2023.5

jordanwhitlock/setbp1_manuscript_panda_1.0.1 latest

espirado/slurm.controller 23.02

gesiscss/binder-r2d-g5b5b759-bassiousmaximus-2dbinder-2dr-2dgus-cfe967 f0376d46edceebca7d36de69b94f160a53a7ff78

ycli1995/bioinfo_dev 1.1.0

vmikk/nextits 1.1.0

madhavsub/rstudio latestseurat

wyangwu/r4.1.2 latest

byjin/sqtl 2.0

r docker for sqtl-seeker2( try )

wesdorp/aws_dna latest

hafen/service-catalog-docker latest

Data science container image for ki service catalog

weishwu/diffbind 3.6.5

compbiocore/jupyterhub-docker-images-jh_image 20230524

bioxfu/xseurat2 latest

haileyzhang/fragpipe-analyst v1.13

A Docker container of Fragpipe-Analyst

wlc27/dcanr v1

codechenx/nafld_500_data latest

gesiscss/binder-r2d-g5b5b759-sedv8808-2dcurrentworkshopsii-9981e5 50a245acdfdc95aea7fb85aaebc05c6cf9a62e36

ntobias85/abe_repo rbuild_reports_1.0.1

gesiscss/binder-r2d-g5b5b759-natpombubpa-2damptk-5f1-2e5-2e4-904cbc b7b2357f6670556e582166033b738136fa103199

venkatk89/sci-vcf latest

stevenpawley/rstats-ml latest

Image for general machine learning in R

cbgr/cager261 1.4

Container for the CAGEr tool version 2.6.1.

weizhoujp/r-chtc-v1 latest

suimye/cage_box latest

jdwiyanto/biobakery4 latest

mirekphd/ml-cpu-r40-rs-cust 20230912

dhspence/docker-genomic-analysis 122121

From Chris Miller's example