Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
Package Usage : cran : permute
Explore the latest package usage data for permute in the cran ecosystem, including detailed information on package dependencies and their usage.
Total dependents: 163
Total downloads: 989,582
More details on packages.ecosyste.ms - JSON
veupathdb/rserve 7
- version: 0.9-7
broadinstitute/terra-jupyter-aou 8bf6b13
- version: 0.9-7
rocker/ropensci latest
- version: 0.9-4
mirekphd/ml-cpu-r40-rs-cust 20230912
- version: 0.9-7
dhspence/docker-genomic-analysis 122121
From Chris Miller's example
- version: 0.9-5
mirekphd/ml-cpu-r36-rs-cust latest
- version: 0.9-7
nfcore/ampliseq dev
A Docker image for nf-core/ampliseq.
- version: 0.9-5
mirekphd/ml-cpu-r36-base latest
- version: 0.9-7
kbase/kbase sdkbase.latest
- version: 0.8-4
dhspence/docker-biscuit latest
- version: 0.9-4
prismcmap/reports 94804f34cf31
- version: 0.9-7
mirekphd/ml-cpu-r35-rs 20190201
- version: 0.9-4
kbase/kbase_base latest
KBase Base Image containing Core services and runtime
- version: 0.8-4
kbase/sdkbase latest
- version: 0.8-4
dhspence/docker-sicer latest
- version: 0.9-4
qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2
- version: 0.9-7
cristaniguti/onemap_git 2.8.0
R package to build linkage map for outcrossing, F2, backcross and RILs populations
- version: 0.9-5
dhspence/docker-basestation latest
- version: 0.9-4
qdidiscoveryservices/py3_cellranger 6.1.2
- version: 0.9-5
veitveit/complexbrowser release-1.6
- version: 0.9-7
mirekphd/ml-cpu-r35-jnb devel_2b2752c
- version: 0.9-4
dhspence/docker-dss latest
- version: 0.9-5
koki/biocdev 20230818
- version: 0.9-7
chgyi/bio 3.5.1
- version: 0.9-4
biocontainers/bioconductor-phyloseq v1.19.1-2-deb_cv1
- version: 0.9-4
mirekphd/ml-cpu-r35-nx devel_fdbf539
- version: 0.9-4
dhspence/docker-manta 1.5.0
- version: 0.9-4
dhspence/docker-hiccompare latest
- version: 0.9-5
mirekphd/ml-cpu-r35-rdp 20180918
- version: 0.9-4
iandennismiller/analyzer latest
Contains Python, Gephi, and RStudio Desktop. Based on /r/iandennismiller/vnc-desktop
- version: 0.9-5
theoaphidian/kraken-bracken latest
A container with all the tools to preprocess metagenome samples with kraken and bracken.
- version: 0.9-7
dhspence/docker-vep 93
- version: 0.9-4
mirekphd/ml-cpu-r35-guac devel_6f33d1e
- version: 0.9-4
mbwali/jupyterlab qiime2023
- version: 0.9-7
mirekphd/ml-gpu-r35-cuda90 devel_00b4e38
- version: 0.9-4
lukasjirinovak/paqvalidation latest
Materials necessary to fully reproduce results of the validation of Perth Alexithymia Questionnaire
- version: 0.9-7
mirekphd/ml-cpu-r36-rs 20200131
- version: 0.9-5
gesiscss/binder-uw-2dmadison-2ddatascience-2dotu-2dvignette-f2459f 84607c79642d786c08b1d37ac66e84d6d35b38de
- version: 0.9-5
biocontainers/ecomet phenomenal-v1.1_cv0.3.39
- version: 0.9-4
mirekphd/ml-gpu-r35-cuda90-rstud devel_9f39157
- version: 0.9-4
evolbioinfo/treewas v1.0
A phylogenetic tree-based approach to genome-wide association studies in microbes
- version: 0.9-5
alanocallaghan/high-dimensional-stats-r latest
- version: 0.9-7
haileyzhang/lfq-analyst v1.2.6
A docker container for LFQ-Analyst
- version: 0.9-7
etretiakov/workbench-session-complete jammy-2023.10.24-custom-12.5
- version: 0.9-7
kaizhang/scatac-bench 0.2.1
- version: 0.9-7
ylebras/neal-docker 2022
- version: 0.9-7
haileyzhang/fragpipe-analyst v0.23
A Docker container of Fragpipe-Analyst
- version: 0.9-7
plaquette/r_helper dev
helper repo to use certain r packages on a computing node
- version: 0.9-7
dhspence/docker-wg-basestation latest
- version: 0.9-5
byjin/sqtl 2.0
r docker for sqtl-seeker2( try )
- version: 0.9-7
qdidiscoveryservices/sc_pip_r_and_py latest
- version: 0.9-5
sebrauschert/amplicon_pipeline v0.3.2
A pipeline for amplicon sequencing analysis of marine fish
- version: 0.9-7
haileyzhang/phospho-analyst v1.0.1
- version: 0.9-7
albertea/numbat_light 02
- version: 0.9-7
qdidiscoveryservices/cellranger7.1.0_py3_r4 latest
- version: 0.9-7
crpeters/r-methylkit 4.2.1
- version: 0.9-7
gesiscss/binder-mortonjt-2dq2stats-2dworkshops-912d21 82c8b562545acab37a854f097c33806fa7c2a4b3
- version: 0.9-5
eduar2/cami latest
- version: 0.9-7
denglab/vpfkit_base latest
- version: 0.9-7
shiramaty/qiime2-sratools latest
- version: 0.9-7
qdidiscoveryservices/flower v3
- version: 0.9-7
veitveit/omicsq latest
- version: 0.9-7
bakeronit/rstudio_hpc_cancer 0.1.3
rocker-rstudio with some R packages installed in cancer genomic analysis
- version: 0.9-7
philipp02/pathway v1
- version: 0.9-7
apollodorus/polyglot v1
- version: 0.9-7
weishwu/nanomethphase 1.2.0
- version: 0.9-7
yumyai/libmiome 0.0.1
Microbiome library
- version: 0.9-7
sebimer/samba-v4-qiime2 2022.11
- version: 0.9-7
emersonchao/dsc180b latest
- version: 0.9-7
ethill/qiime2 latest
docker container for qiime2
- version: 0.9-7
codechenx/mice_aspergillus_infection_lung_project latest
- version: 0.9-7
kbase/rast_base 1.9.1
- version: 0.8-4
gesiscss/binder-ngs-2ddocs-2d2018-2dggg201a-e01a75 18ae0fd4cd73f6d612f276af6afe6fdd663e2724
- version: 0.9-4
jenfisher7/rstudio_sbae latest
- version: 0.9-7
kumalpha/qiime2-core latest
- version: 0.9-5
mziemann/meth_analysis latest
Based on BioC release 3.14, this image is designed for analysis of infinium methylation array data
- version: 0.9-7
ntobias85/abe_repo degust_build
- version: 0.9-7
sebimer/samba-v4-picrust2 2.5.1
- version: 0.9-7
jordanwhitlock/setbp1_manuscript_panda_1.0.1 latest
- version: 0.9-7
madhavsub/rstudio latestseurat
- version: 0.9-7
danhumassmed/debrowser 1.0.1
Software for Bioinformatics pipelines DEBrowser
- version: 0.9-7
compbiocore/jupyterhub-docker-images-jh_image 20230524
- version: 0.9-7
weishwu/diffbind 3.6.5
- version: 0.9-7
wlc27/dcanr v1
- version: 0.9-7
dlopezl/wallace 2.0.5
- version: 0.9-7
matzieb/shiny-4.0.3-seurat4-spatial latest
- version: 0.9-7
cgwyx/easymicrobiomer latest
The best practice for microbiome analysis using R
- version: 0.9-7
wesdorp/aws_dna latest
- version: 0.9-7
codechenx/nafld_500_data latest
- version: 0.9-7
gesiscss/binder-r2d-g5b5b759-sedv8808-2dcurrentworkshopsii-9981e5 50a245acdfdc95aea7fb85aaebc05c6cf9a62e36
- version: 0.9-7
gesiscss/binder-r2d-g5b5b759-natpombubpa-2damptk-5f1-2e5-2e4-904cbc b7b2357f6670556e582166033b738136fa103199
- version: 0.9-7
venkatk89/sci-vcf latest
- version: 0.9-7
cbgr/cager261 1.4
Container for the CAGEr tool version 2.6.1.
- version: 0.9-7
weizhoujp/r-chtc-v1 latest
- version: 0.9-7
gesiscss/binder-r2d-g5b5b759-angrymaciek-2dwarlock-dd4b2f 790d22e93c5938404b49bc684e2452b0ff43f86d
- version: 0.9-7