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Package Usage : deb : ubuntu/ncbi-data

Explore the latest package usage data for ubuntu/ncbi-data in the deb ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 53
Total downloads: 27,964
Showing first 100 dependents

More details on packages.ecosyste.ms - JSON

luisas/feelnc 0.1.1

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: over 6 years ago - 56 downloads - 662 dependencies
dhspence/docker-cnvkit2 latest

now emacs enhanced!

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: about 7 years ago - 203 downloads - 619 dependencies
souckmi/fusioncatcher 1.1

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: about 3 years ago - 50 downloads - 421 dependencies
pxhhappy/abricate BruVF_smart

  • version: 6.1.20170106+dfsg1-8
  • arch: all
  • distro: ubuntu-20.04
  • upstream: ncbi-tools6
Latest release: over 2 years ago - 26 downloads - 193 dependencies
biocontainers/mitohifi 3.0.0_cv1

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: almost 3 years ago - 3,691 downloads - 559 dependencies
kapsakcj/shigeifinder 1.3.5

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: over 2 years ago - 483 downloads - 165 dependencies
wao2/kraken2_container latest

  • version: 6.1.20170106+dfsg1-9
  • arch: all
  • distro: ubuntu-22.04
  • upstream: ncbi-tools6
Latest release: over 2 years ago - 31 downloads - 191 dependencies
evolbioinfo/kraken v2.1.3

Taxonomic classification system using exact k-mer matches

  • version: 6.1.20120620-10, 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: over 2 years ago - 342 downloads - 172 dependencies
biocontainers/integron-finder v1.5.1_cv2

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: over 6 years ago - 173 downloads - 320 dependencies
chgyi/bio 3.5.1

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: over 7 years ago - 795 downloads - 1,077 dependencies
h836472/contscout nc_review2

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 956 downloads - 547 dependencies
cjchen/tbtoolszone 2.0

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: almost 3 years ago - 141 downloads - 789 dependencies
gene110/factera latest

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: over 4 years ago - 39 downloads - 315 dependencies
nahyunkong/mito v6

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: almost 3 years ago - 16,238 downloads - 2,488 dependencies
biodufpa/pp2oa advanced

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.10
Latest release: over 2 years ago - 99 downloads - 1,124 dependencies
vanallenlab/g2c-vep bigWigFileOpen

  • version: 6.1.20170106+dfsg1-8
  • arch: all
  • distro: ubuntu-20.04
  • upstream: ncbi-tools6
Latest release: 3 months ago - 11,589 downloads - 760 dependencies
bsceapm/ahatool 2.2

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: almost 3 years ago - 259 downloads - 40 dependencies
gene110/vep_filter v07

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: over 4 years ago - 10 downloads - 1,164 dependencies
darachm/fire fire

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: almost 3 years ago - 45 downloads - 402 dependencies
staphb/virulencefinder 3.2.0

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: 6 months ago - 206 downloads - 193 dependencies
ycli1995/bioinfo_dev 1.1.0

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 188 downloads - 4,337 dependencies
bioxfu/ddngs latest

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: almost 3 years ago - 44 downloads - 1,055 dependencies
streptomyces/reciblast latest

Reciprocal blastp for Ainsley

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: about 3 years ago - 112 downloads - 754 dependencies
qtulab/miniencode latest

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 217 downloads - 4,269 dependencies
jdwiyanto/biobakery4 latest

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: almost 3 years ago - 29 downloads - 832 dependencies
streptomyces/stage004 latest

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 17 downloads - 862 dependencies
arcsw2/spark-builder latest

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: about 3 years ago - 47 downloads - 1,327 dependencies
kbase/kbase sdkbase.latest

  • version: 6.1.20120620-7
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-14.04
Latest release: almost 8 years ago - 4,331 downloads - 2,934 dependencies
epereira/geoblast latest

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: almost 3 years ago - 71 downloads - 305 dependencies
mchoilab/arcas_hla 0.5.0

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: about 3 years ago - 1,888 downloads - 432 dependencies
h836472/cs_mainimage test

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: about 3 years ago - 15 downloads - 769 dependencies
genomehubs/mitohifi latest

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: about 3 years ago - 157 downloads - 670 dependencies
evolbioinfo/shorah v1.99.2

https://github.com/cbg-ethz/shorah/

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: about 4 years ago - 89 downloads - 219 dependencies
evolbioinfo/velvet v1.2.10

Short read de novo assembler using de Bruijn graphs http://www.ebi.ac.uk/~zerbino/velvet/

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: over 7 years ago - 41 downloads - 459 dependencies
dhspence/docker-cle-cwl latest

from mgibio with cwl in there too

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: over 8 years ago - 230 downloads - 1,402 dependencies
avneeshbt/braker_sep062022 latest

Braker with Augustus

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: over 3 years ago - 74 downloads - 719 dependencies
anand7899/biopython latest

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: over 3 years ago - 105 downloads - 323 dependencies
dhspence/docker-cnvkit latest

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: almost 8 years ago - 118 downloads - 542 dependencies
pipecraft/vsearch_dada2 0

  • version: 6.1.20170106 dfsg1-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-23.10
Latest release: over 2 years ago - 564 downloads - 785 dependencies
darachm/bioinf bioinf-sam-bedtools-emboss-ncbi-ucsc-genometools-htslib

bioinformatic tools

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: over 2 years ago - 1,080 downloads - 395 dependencies
jwcarlson/pathologic-v20.0 67453b44

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: about 3 years ago - 271 downloads - 228 dependencies
htanpipelines/arcashla latest

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: almost 3 years ago - 216 downloads - 423 dependencies
souckmi2/fusioncatcher 1.0

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: almost 3 years ago - 14 downloads - 399 dependencies
docker4sheng/workflow latest

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: about 3 years ago - 20 downloads - 1,519 dependencies
skchronicles/genome-seek_hla v0.1.0

Official docker image for HLA typing steps in genome-seek

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: almost 3 years ago - 153 downloads - 1,722 dependencies
tbreina1/cld-crispr-designer latest

An updated Docker for CLD: https://github.com/boutroslab/cld_docker

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: about 3 years ago - 86 downloads - 747 dependencies
kbase/kbase_base latest

KBase Base Image containing Core services and runtime

  • version: 6.1.20120620-7
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-14.04
Latest release: over 9 years ago - 719 downloads - 3,106 dependencies
kbase/sdkbase latest

  • version: 6.1.20120620-7
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-14.04
Latest release: about 9 years ago - 513 downloads - 2,934 dependencies
intelliseqngs/task_rna-seq-fastqc-overrep 1.1.1

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: over 5 years ago - 498 downloads - 237 dependencies
anand7899/alignment-tools latest

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: over 3 years ago - 427 downloads - 218 dependencies
staphb/emmtypingtool 0.0.1

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: about 3 years ago - 1,162 downloads - 254 dependencies
mchoilab/sc_hla_count 0.2.1

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: almost 3 years ago - 388 downloads - 396 dependencies
dhspence/docker-haloplex_demux latest

Custom demultiplexing utility for HaloplexHS

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: over 8 years ago - 348 downloads - 259 dependencies
alesmaver/scramble2 latest

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: over 2 years ago - 2,947 downloads - 1,116 dependencies
sagnikbanerjee15/nucleotide_selection_study 0.0.1

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: almost 4 years ago - 22 downloads - 784 dependencies
commander121/biopython 1.76d-b4

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: 7 months ago - 969 downloads - 286 dependencies