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Package Usage : deb : ubuntu/ncbi-data

Explore the latest package usage data for ubuntu/ncbi-data in the deb ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 53
Total downloads: 27,964

More details on packages.ecosyste.ms - JSON

kbase/kbase sdkbase.latest

  • version: 6.1.20120620-7
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-14.04
Latest release: over 7 years ago - 4,321 downloads - 2,934 dependencies
kbase/kbase_base latest

KBase Base Image containing Core services and runtime

  • version: 6.1.20120620-7
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-14.04
Latest release: over 8 years ago - 644 downloads - 3,106 dependencies
kbase/sdkbase latest

  • version: 6.1.20120620-7
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-14.04
Latest release: over 8 years ago - 497 downloads - 2,934 dependencies
biocontainers/mitohifi 3.0.0_cv1

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: over 2 years ago - 3,626 downloads - 559 dependencies
intelliseqngs/task_rna-seq-fastqc-overrep 1.1.1

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: almost 5 years ago - 492 downloads - 237 dependencies
kapsakcj/shigeifinder 1.3.5

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 479 downloads - 165 dependencies
anand7899/alignment-tools latest

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: about 3 years ago - 414 downloads - 218 dependencies
dhspence/docker-haloplex_demux latest

Custom demultiplexing utility for HaloplexHS

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: almost 8 years ago - 345 downloads - 259 dependencies
evolbioinfo/kraken v2.1.3

Taxonomic classification system using exact k-mer matches

  • version: 6.1.20170106 dfsg1-9, 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: about 2 years ago - 308 downloads - 172 dependencies
dhspence/docker-cnvkit2 latest

now emacs enhanced!

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: over 6 years ago - 190 downloads - 619 dependencies
chgyi/bio 3.5.1

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: almost 7 years ago - 531 downloads - 1,077 dependencies
biocontainers/integron-finder v1.5.1_cv2

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: about 6 years ago - 173 downloads - 320 dependencies
anand7899/biopython latest

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: almost 3 years ago - 104 downloads - 323 dependencies
dhspence/docker-cnvkit latest

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: over 7 years ago - 113 downloads - 542 dependencies
genomehubs/mitohifi latest

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: over 2 years ago - 143 downloads - 670 dependencies
evolbioinfo/shorah v1.99.2

https://github.com/cbg-ethz/shorah/

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: over 3 years ago - 68 downloads - 219 dependencies
h836472/contscout nc_review2

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 657 downloads - 547 dependencies
gene110/factera latest

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: about 4 years ago - 39 downloads - 315 dependencies
luisas/feelnc 0.1.1

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: almost 6 years ago - 49 downloads - 662 dependencies
dhspence/docker-cle-cwl latest

from mgibio with cwl in there too

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: almost 8 years ago - 139 downloads - 1,402 dependencies
evolbioinfo/velvet v1.2.10

Short read de novo assembler using de Bruijn graphs http://www.ebi.ac.uk/~zerbino/velvet/

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: over 6 years ago - 39 downloads - 459 dependencies
avneeshbt/braker_sep062022 latest

Braker with Augustus

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: almost 3 years ago - 52 downloads - 719 dependencies
nahyunkong/mito v6

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 16,203 downloads - 2,488 dependencies
docker4sheng/workflow latest

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: over 2 years ago - 20 downloads - 1,519 dependencies
h836472/cs_mainimage test

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 15 downloads - 769 dependencies
jwcarlson/pathologic-v20.0 67453b44

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: over 2 years ago - 223 downloads - 228 dependencies
souckmi/fusioncatcher 1.1

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: over 2 years ago - 49 downloads - 421 dependencies
mchoilab/arcas_hla 0.5.0

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: over 2 years ago - 1,858 downloads - 432 dependencies
bsceapm/ahatool 2.2

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 204 downloads - 40 dependencies
gene110/vep_filter v07

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: about 4 years ago - 10 downloads - 1,164 dependencies
staphb/virulencefinder 3.1.0

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: 5 months ago - 145 downloads - 193 dependencies
sagnikbanerjee15/nucleotide_selection_study 0.0.1

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: over 3 years ago - 20 downloads - 784 dependencies
arcsw2/spark-builder latest

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: over 2 years ago - 35 downloads - 1,327 dependencies
staphb/emmtypingtool 0.0.1

  • version: 6.1.20120620-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-16.04
Latest release: over 2 years ago - 1,121 downloads - 254 dependencies
bioxfu/ddngs latest

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 36 downloads - 1,055 dependencies
streptomyces/reciblast latest

Reciprocal blastp for Ainsley

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 82 downloads - 754 dependencies
tbreina1/cld-crispr-designer latest

An updated Docker for CLD: https://github.com/boutroslab/cld_docker

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: over 2 years ago - 69 downloads - 747 dependencies
qtulab/miniencode latest

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 184 downloads - 4,269 dependencies
epereira/geoblast latest

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 54 downloads - 305 dependencies
souckmi2/fusioncatcher 1.0

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: about 2 years ago - 13 downloads - 399 dependencies
darachm/bioinf bioinf-sam-bedtools-emboss-ncbi-ucsc-genometools-htslib

bioinformatic tools

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 976 downloads - 395 dependencies
mchoilab/sc_hla_count 0.2.1

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: over 2 years ago - 371 downloads - 396 dependencies
alesmaver/scramble2 latest

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 2,550 downloads - 1,116 dependencies
commander121/biopython 1.76d-b3

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: 6 months ago - 858 downloads - 286 dependencies
cjchen/tbtoolszone 2.0

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 139 downloads - 789 dependencies
pipecraft/vsearch_dada2 0

  • version: 6.1.20170106 dfsg1-10
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-23.10
Latest release: over 1 year ago - 462 downloads - 785 dependencies
htanpipelines/arcashla latest

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: over 2 years ago - 160 downloads - 423 dependencies
biodufpa/pp2oa advanced

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.10
Latest release: about 2 years ago - 82 downloads - 1,124 dependencies
darachm/fire fire

  • version: 6.1.20170106 dfsg1-8
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 43 downloads - 402 dependencies
ycli1995/bioinfo_dev 1.1.0

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: about 1 year ago - 157 downloads - 4,337 dependencies
skchronicles/genome-seek_hla v0.1.0

Official docker image for HLA typing steps in genome-seek

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: over 2 years ago - 146 downloads - 1,722 dependencies
jdwiyanto/biobakery4 latest

  • version: 6.1.20170106-2
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-18.04
Latest release: over 2 years ago - 26 downloads - 832 dependencies
streptomyces/stage004 latest

  • version: 6.1.20170106 dfsg1-9
  • arch: all
  • upstream: ncbi-tools6
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 17 downloads - 862 dependencies