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An open API service providing dependency metadata for docker images.

Package Usage : pypi : biopython

Explore the latest package usage data for biopython in the pypi ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 408
Total downloads: 32,873,459
Showing first 100 dependents

More details on packages.ecosyste.ms - JSON

broadinstitute/gatk 4.6.2.0

Official release repository for GATK versions 4.x

  • version: 1.76
Latest release: 8 months ago - 40,521,415 downloads - 513 dependencies
mirekphd/tst-ml-gpu-py36-cuda8-failing 001766c55ca8

  • version: 1.72
Latest release: about 7 years ago - 50 downloads - 2,084 dependencies
qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 1.78
Latest release: about 2 years ago - 4,362 downloads - 1,464 dependencies
biocontainers/python-biopython-sql v1.68dfsg-3-deb_cv1

  • version: 1.68
Latest release: over 7 years ago - 48 downloads - 152 dependencies
nfcore/eager 2.5.3

A Docker image for the nf-core/eager pipeline.

  • version: 1.79
Latest release: 8 months ago - 49,564 downloads - 738 dependencies
ontresearch/wf-somatic-snp sha86599ecdb46472d01e0b7c2704683f6aee8a82dd

  • version: 1.81
Latest release: over 1 year ago - 7,884 downloads - 127 dependencies
chasemc2/sgnf-sgpy 1.2.2

  • version: 1.81
Latest release: about 1 year ago - 1,187 downloads - 384 dependencies
tercen/tracer_docker_operator 0.1.1

  • version: 1.77
Latest release: over 3 years ago - 119 downloads - 826 dependencies
doejgi/synbioqc-dual_barcode 1.3.9

version of SynBioQC PacBio sequence validation pipeline for highly similar synthetic constructs

  • version: 1.79
Latest release: over 1 year ago - 1,202 downloads - 1,113 dependencies
docmanny/funannotate-docker latest

  • version: 1.79
Latest release: about 3 years ago - 105 downloads - 287 dependencies
qdidiscoveryservices/docker-biopy latest

  • version: 1.79
Latest release: almost 4 years ago - 101 downloads - 700 dependencies
intelliseqngs/task_bam-metrics-hg38 1.0.2

  • version: 1.76
Latest release: almost 3 years ago - 112 downloads - 1,144 dependencies
mirekphd/ml-cpu-py36-jup 20190218

  • version: 1.73
Latest release: almost 7 years ago - 833 downloads - 2,424 dependencies
bactopia/bactopia 2.2.0

  • version: 1.80
Latest release: almost 3 years ago - 7,321 downloads - 561 dependencies
genomicmedicinesweden/gms-artic-nanopore 0c599b9

  • version: 1.79
Latest release: about 2 years ago - 3,175 downloads - 153 dependencies
hkubal/clairs v0.4.3

  • version: 1.80
Latest release: 5 months ago - 4,523 downloads - 150 dependencies
dolphinnext/ont_variant_calling 1.0

  • version: 1.80
Latest release: almost 3 years ago - 90 downloads - 494 dependencies
unlhcc/cellranger-arc 2.0.2

  • version: 1.78
Latest release: over 2 years ago - 816 downloads - 235 dependencies
souckmi/fusioncatcher 1.1

  • version: 1.70
Latest release: almost 3 years ago - 50 downloads - 421 dependencies
almahmoud/jupyter-bioc-gxy 21.10

  • version: 1.78
Latest release: over 3 years ago - 37 downloads - 1,457 dependencies
mirekphd/ml-pred-py36-cuda90 20190826

  • version: 1.73
Latest release: over 6 years ago - 681 downloads - 3,188 dependencies
qdidiscoveryservices/crispresso2-biopy v2.3.3

Image for running largeAggregrate branch of CRISPResso2

  • version: 1.78
Latest release: 22 days ago - 9,715 downloads - 181 dependencies
google/deepconsensus 1.2.0

  • version: 1.81
Latest release: over 2 years ago - 4,867 downloads - 178 dependencies
nfcore/proteinfold_alphafold2_split 1.1.0

  • version: 1.79
Latest release: over 2 years ago - 165 downloads - 86 dependencies
lmansouri/alphafold-standard 2.0.0

  • version: 1.79
Latest release: over 2 years ago - 178 downloads - 85 dependencies
evolbioinfo/pastml v1.9.51

Ancestral character reconstruction and visualization for rooted phylogenetic trees

  • version: 1.79
Latest release: 7 months ago - 2,535 downloads - 106 dependencies
intelliseqngs/task_vcf-select-var-somatic 1.0.0

  • version: 1.79
Latest release: almost 3 years ago - 54 downloads - 388 dependencies
evolbioinfo/python-ml v.3.11.2

Python 3.8 libraries for simple machine learning

  • version: 1.78
Latest release: over 2 years ago - 1,781 downloads - 241 dependencies
staphb/homopolish 0.4.1

  • version: 1.79
Latest release: over 2 years ago - 302 downloads - 36 dependencies
hnh0303/mask_gubbins_aln 3.3

  • version: 1.79
Latest release: almost 3 years ago - 101 downloads - 8 dependencies
anastacia9/earth latest

  • version: 1.79
Latest release: over 3 years ago - 106 downloads - 31 dependencies
unigebsp/resfinder 4.3.1

  • version: 1.81
Latest release: over 2 years ago - 125 downloads - 19 dependencies
hoonbiolab/ccle-cga v0.2

  • version: 1.66
Latest release: almost 3 years ago - 255 downloads - 586 dependencies
broadinstitute/gatk-nightly 2024-08-17-4.6.0.0-10-g9f2fbb553-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

  • version: 1.76
Latest release: over 1 year ago - 186,109 downloads - 912 dependencies
intelliseqngs/task_vcf-anno-dbnsfp 1.3.0-chrY-and-the-rest

  • version: 1.76
Latest release: over 2 years ago - 65,668 downloads - 418 dependencies
intelliseqngs/task_vcf-anno-freq-exome 3.1.2-chrY-and-the-rest

  • version: 1.79
Latest release: over 2 years ago - 36,271 downloads - 333 dependencies
nfcore/gitpod 3.3.2

  • version: 1.81
Latest release: 5 months ago - 34,315 downloads - 1,545 dependencies
nicksunderland/gwas2vcf v0.0.5

  • version: 1.72
Latest release: over 2 years ago - 164 downloads - 26 dependencies
celestia1/metagenome 2.1.1

  • version: 1.78
Latest release: almost 5 years ago - 114 downloads - 33 dependencies
intelliseqngs/task_nipt-anno 1.2.0

  • version: 1.76
Latest release: about 3 years ago - 126 downloads - 102 dependencies
intelliseqngs/task_vcf-anno-func-var 1.6.0

  • version: 1.79
Latest release: over 2 years ago - 3,479 downloads - 333 dependencies
intelliseqngs/task_vcf-anno-func-gene 1.3.5

  • version: 1.79
Latest release: over 2 years ago - 3,362 downloads - 315 dependencies
intelliseqngs/task_vcf-acmg-bp1 2.0.0

  • version: 1.79
Latest release: over 1 year ago - 3,631 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pvs1 2.0.0

  • version: 1.79
Latest release: over 1 year ago - 3,896 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-bp5 2.0.2

  • version: 1.79
Latest release: about 1 year ago - 3,601 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-ps1 2.0.0

  • version: 1.79
Latest release: over 1 year ago - 3,688 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pp2 2.0.0

  • version: 1.79
Latest release: over 1 year ago - 3,618 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pm1 3.0.0

  • version: 1.79
Latest release: over 1 year ago - 3,753 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-bp4 3.0.0

  • version: 1.79
Latest release: over 1 year ago - 3,598 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pm5 2.0.0

  • version: 1.79
Latest release: over 1 year ago - 3,598 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-ps3 2.0.0

  • version: 1.79
Latest release: over 1 year ago - 3,566 downloads - 334 dependencies
intelliseqngs/task_vcf-acmg-pp3 3.0.0

  • version: 1.79
Latest release: over 1 year ago - 3,569 downloads - 333 dependencies
intelliseqngs/gatk-4.1.9.0 1.0.0

  • version: 1.76
Latest release: about 5 years ago - 2,229 downloads - 967 dependencies
emvcaest/markerscan latest

  • version: 1.70, 1.78, 1.79
Latest release: over 2 years ago - 195 downloads - 526 dependencies
intelliseqngs/task_vcf-anno-civic 1.2.11

  • version: 1.79
Latest release: 3 months ago - 2,897 downloads - 332 dependencies
docmanny/mitohifi c06ed3e

  • version: 1.79
Latest release: almost 4 years ago - 97 downloads - 53 dependencies
doejgi/synbioqc-libqc 0.7.0

  • version: 1.79
Latest release: almost 2 years ago - 1,261 downloads - 454 dependencies
dhspence/docker-smallrnaseq latest

  • version: 1.70
Latest release: over 7 years ago - 862 downloads - 911 dependencies
ztang301/exph vHipSTR

  • version: 1.70
Latest release: about 1 year ago - 5,000 downloads - 402 dependencies
evolbioinfo/python-evol v3.8.2

Python3 with libraries useful for phylogenetical analyses

  • version: 1.73
Latest release: over 5 years ago - 933 downloads - 107 dependencies
openbiosim/biosimspace 2023.1.1

OpenBioSim default BioSimSpace container (see https://github.com/openbiosim/containers)

  • version: 1.80
Latest release: almost 3 years ago - 53 downloads - 1,167 dependencies
raghukirannavipoint/galaxytools june23

  • version: 1.78
Latest release: over 2 years ago - 157 downloads - 163 dependencies
nextgenusfs/funannotate-slim v1.8.17

Base funannotate image (no databases)

  • version: 1.80
Latest release: over 1 year ago - 1,497 downloads - 261 dependencies
openbiosim/notebook 2024.3.0

This is the container that is behind the https://try.openbiosim.org notebook service

  • version: 1.81
Latest release: about 1 year ago - 372 downloads - 1,450 dependencies
intelliseqngs/task_bed-to-interval-list 1.1.5

  • version: 1.76
Latest release: almost 3 years ago - 1,025 downloads - 1,057 dependencies
biocontainers/mitohifi 3.0.0_cv1

  • version: 1.79
Latest release: over 2 years ago - 3,691 downloads - 559 dependencies
intelliseqngs/task_vcf-anno-snpeff-grch38.107 1.1.0

  • version: 1.79
Latest release: over 2 years ago - 6,586 downloads - 492 dependencies
qdidiscoveryservices/gatk-v2461_bwa_aws latest

  • version: 1.76
Latest release: almost 3 years ago - 403 downloads - 849 dependencies
dockerymh/protprep 0.0.1

Protein Preparation

  • version: 1.79
Latest release: almost 4 years ago - 222 downloads - 553 dependencies
intelliseqngs/prodia_task_vcf-beagle-postproc 1.0.1

  • version: 1.79
Latest release: about 3 years ago - 53 downloads - 388 dependencies
humanpangenomics/verkko_hic 0.0.1--b9f444928b4f920d0ff399466d2805883f1b38d8

  • version: 1.79
Latest release: almost 3 years ago - 262 downloads - 166 dependencies
intelliseqngs/gsort 1.0.1

  • version: 1.76
Latest release: over 2 years ago - 357 downloads - 315 dependencies
intelliseqngs/task_imputing-quality 0.0.2

  • version: 1.76
Latest release: over 4 years ago - 40 downloads - 355 dependencies
doejgi/synbioqc-pbj 3.4.2

  • version: 1.79
Latest release: 3 months ago - 1,190 downloads - 930 dependencies
vaidyasm/kaggle-python latest

  • version: 1.76
Latest release: almost 6 years ago - 65 downloads - 2,567 dependencies
doejgi/multidap 1.3.0

  • version: 1.78
Latest release: almost 3 years ago - 1,379 downloads - 101 dependencies
hoonbiolab/vcf-kit v1.1

  • version: 1.79
Latest release: about 4 years ago - 86 downloads - 840 dependencies
mirekphd/gbdt-gpu-docker-devel latest

  • version: 1.71
Latest release: over 7 years ago - 120 downloads - 1,024 dependencies
kbase/narrativereaper develop

Narrative reaper

  • version: 1.71
Latest release: over 6 years ago - 44 downloads - 385 dependencies
gesiscss/binder-ajoorabchi-2dwp2cochrane-c9d31c f6bed709376a2174a1a803cd2b37a6ecfb43d2ec

  • version: 1.76
Latest release: almost 6 years ago - 34 downloads - 3,492 dependencies
almahmoud/jbrowse newest

  • version: 1.72
Latest release: almost 6 years ago - 49 downloads - 1,216 dependencies
dockerymh/promod3 0.0.3

  • version: 1.79
Latest release: over 3 years ago - 50 downloads - 286 dependencies
jhandl/scipion-tool-dev scipion-em-eman2

  • version: 1.76
Latest release: almost 3 years ago - 168 downloads - 1,957 dependencies
gesiscss/binder-carjed-2ddoomsayer-85bbc5 651e939aaf1eaaf8af63957b67b7b5146ab90d6e

  • version: 1.76
Latest release: almost 6 years ago - 34 downloads - 1,660 dependencies
ontresearch/wf-somatic-methyl shaeb8f5280b11211ca331f909cc64603d9ae433fee

  • version: 1.81
Latest release: over 1 year ago - 1,427 downloads - 126 dependencies
evolbioinfo/sdrmhunter v0.2.1

SDRM detection with sierrapy

  • version: 1.70
Latest release: over 7 years ago - 316 downloads - 106 dependencies
ghhenry/curio-seeker-pipeline latest

  • version: 1.80
Latest release: almost 3 years ago - 37 downloads - 926 dependencies
intelliseqngs/ubuntu-toolbox-22.04 1.0.3

  • version: 1.81
Latest release: over 2 years ago - 148 downloads - 389 dependencies
ddiazescandon/funannotate 1.8.15

nextgenusfs/funannotate:1.8.15 with a working chlorophyte_odb10 set, phyml for dn/ds and micromamba

  • version: 1.81
Latest release: over 2 years ago - 118 downloads - 338 dependencies
mdivr/quarto v17.2

  • version: 1.81
Latest release: 8 months ago - 1,434 downloads - 2,693 dependencies
hoonbiolab/aasuite v0.1477.3

  • version: 1.79
Latest release: over 2 years ago - 989 downloads - 681 dependencies
qdidiscoveryservices/gatk-v2461_bwa_aws_vardict latest

  • version: 1.76
Latest release: almost 3 years ago - 131 downloads - 1,081 dependencies
intelliseqngs/gatk-4.2.0.0-hg38 1.1.0

  • version: 1.76
Latest release: about 4 years ago - 183 downloads - 1,057 dependencies
intelliseqngs/task_vcf-beagle-merge 1.0.1

  • version: 1.79
Latest release: almost 3 years ago - 71 downloads - 388 dependencies