broadinstitute/gatk 4.6.1.0

Official release repository for GATK versions 4.x

veupathdb/rserve 8.2.2

ccdlstaging/dr_downloaders 1.45.8

broadinstitute/terra-jupyter-aou 2.1.13

ccdlstaging/dr_affymetrix 1.45.8

nfcore/methylseq 1.6.1

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel.

broadinstitute/gatk-nightly 2024-08-17-4.6.0.0-10-g9f2fbb553-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

vanallenlab/sv-pipeline-base gnomad_rf_abd6c1

ccdlstaging/dr_salmon 1.45.8

nfcore/atacseq 1.2.2

A Docker container for the nf-core/atacseq pipeline.

nfcore/chipseq 1.2.2

A docker image for nf-core/chipseq

dhspence/docker-basespace_chromoseq latest

nfcore/eager 2.5.3

A Docker image for the nf-core/eager pipeline.

mirekphd/ml-cpu-r40-rs-cust 20230912

ccdlstaging/dr_no_op 1.45.8

vanallenlab/sv-pipeline rlc_aou_evidencetable_fix

nfcore/ampliseq 1.2.0

A Docker image for nf-core/ampliseq.

biocontainers/surankco v0.0.r5dfsg-2-deb_cv1

tabbzi/terra-dogagingproject-data-curation latest

kbase/kbase sdkbase.latest

ccdlstaging/dr_smasher 1.45.8

ccdlstaging/dr_illumina 1.45.8

nfcore/bcellmagic 1.2.0

A preliminary container for the bcellmagic pipeline

qcdis/n-a-a-vre-vol2bird v2.3.3-beta

nfcore/airrflowreport dev

alexwaldrop/adjust_csv_pvalue a40b48623a4877766f8a388046a2dd2cebe9d8f6

recetox/retip 0.5.4-recetox4

Retention Time prediction for metabolomics

nfcore/sarek 2.7.2

A Docker container for the nf-core/sarek pipeline

intelliseqngs/gatk-4.1.7.0-hg38 1.0.1

intelliseqngs/task_bam-bsqr 1.2.2

ebsproject/af-aeo dev-ecs-24.08.22

intelliseqngs/task_bam-filter-mismatch 1.4.1

nfcore/hic 1.3.0

A docker container for the nf-core/hic pipeline.

intelliseqngs/gatk dbsnp-genotyping_grch38-no-alt-analysis-set_1.0.4-chrY-and-the-rest

intelliseqngs/gatk-4.1.7.0 1.0.4

intelliseqngs/task_bam-metrics 1.2.8

intelliseqngs/task_bam-metrics-grch38-no-alt 1.0.2

intelliseqngs/gatk-4.1.6.0-hg38 1.1.0

intelliseqngs/gatk-4.1.6.0 2.0.2

qcdis/n-a-a-vre v2.6.1

intelliseqngs/task_mt-varcall-mutect2 1.1.2

intelliseqngs/task_genotype-gvcf-on-dbsnp-positions-grch38-no-alt 1.0.2-chrY-and-the-rest

intelliseqngs/gatk-4.2.0.0 1.0.0

intelliseqngs/task_vcf-concat 1.0.4

intelliseqngs/task_vcf-anno-cosmic 2.1.6

qcdis/n-a-a-vre-laserfarm v2.3.3-beta

intelliseqngs/task_mt-realign 1.1.2

intelliseqngs/task_bam-gatk-m2 1.1.2

intelliseqngs/task_vcf-varcall-metrics-hg38 1.1.2

intelliseqngs/gatk-4.2.0.0-grch38-no-alt 1.1.0

intelliseqngs/task_vcf-qc 1.4.0

hoonbiolab/cellranger v1.0

intelliseqngs/task_vcf-prepare 1.0.4

dg520/rsimple 1.1

mirekphd/ml-cpu-r35-rs 20190201

nfcore/exoseq dev

A docker container for the ExoSeq pipeline

intelliseqngs/gatk-4.1.7.0-grch38-no-alt 1.0.1

seglh/exomedepth f4716ad

intelliseqngs/gatk-4.2.4.1-grch38-no-alt 1.0.0

gene110/nipt_report latest

kbase/kbase_base latest

KBase Base Image containing Core services and runtime

kbase/sdkbase latest

evolbioinfo/table2itol fa4b43c

The table2itol.R script makes it easy to generate iTOL annotations from spreadsheet files.

intelliseqngs/gatk-4.2.4.1-hg38 1.0.0

vanallenlab/sv-pipeline-qc gnomad_v3_qc

intelliseqngs/task_vcf-concat-beagle 1.1.3

intelliseqngs/task_vcf-vqsr-snp-recalib-hg38 1.1.2

intelliseqngs/resources longranger_v0.1

intelliseqngs/task_genotype-gvcf-on-dbsnp-positions-hg38 1.0.2-chrY-and-the-rest

intelliseqngs/task_vcf-vqsr-indel-recalib-hg38 1.1.2

bactopia/tools-phyloflash 1.7.1

hoonbiolab/align_dna v1.3

biocontainers/ramid phenomenal-v1.0_cv1.0.18

R-program to read CDF files created by mass spectrometry and evaluate the MS 13C-labeled metabolites

intelliseqngs/task_pileup-merge 1.0.2

dhspence/docker-ichor latest

trust1/gatk version0.4.1

Variant Calling Pipeline based on GATK image

ocdr/r_server citox

intelliseqngs/astrolabe 1.0.0

intelliseqngs/bcl-to-fq 1.0.2

ctomlins/minion_qc latest

hoonbiolab/hmftools v1.1

intelliseqngs/gatk-4.2.0.0-hg38 1.1.0

broadinstitute/pcawg_broad_wgs_variant_callers mutect_2percent_floor

pcawg_broad_wgs_variant_callers

chgyi/bio 3.5.1

evolbioinfo/minionqc v1.4.1

Quality control for MinION sequencing data

ocdr/custom-kfserving R-sonar-mm

swekhande/sw-dockers seqspec-libspec-extract

my dockers

broadinstitute/pcawg_full 7

hoonbiolab/hl_base v1.2

chgyi/metaware_rna_denovo latest