shl198/sc_ppl : 202306

Latest release: over 3 years ago - 79 downloads - 2,005 dependencies

JSON

Dependencies

@PKGNAME@ @VERSION@
AnnotationDbi 1.62.1
BH 1.81.0-1
Biobase 2.60.0
BiocGenerics 0.46.0
BiocManager 1.30.20
BiocNeighbors 1.18.0
BiocParallel 1.34.1
BiocSingular 1.16.0
BiocVersion 3.17.1
Biostrings 2.68.0
ClusterR 1.3.1
ComplexHeatmap 2.16.0
DBI 1.1.3
DDRTree 0.1.5
DelayedArray 0.26.2
DelayedMatrixStats 1.22.0
DropletUtils 1.20.0
FNN 1.1.3.2
GenomeInfoDb 1.36.0
GenomeInfoDbData 1.2.10
GenomicRanges 1.52.0
GetoptLong 1.0.5
GlobalOptions 0.1.2
HDF5Array 1.28.1
HSMMSingleCell 1.20.0
IRanges 2.34.0
KEGGREST 1.40.0
KernSmooth 2.23-20
Lahman 11.0-0
MASS 7.3-58.4
MAST 1.26.0
Matrix 1.5-4
MatrixGenerics 1.12.0
NMF 0.26
R.methodsS3 1.8.2
R.oo 1.25.0
R.utils 2.12.2
R6 2.5.1
RANN 2.6.1
RBGL 1.76.0
RColorBrewer 1.1-3
RCurl 1.98-1.12
RMariaDB 1.2.2
RNeXML 2.4.11
ROCR 1.0-11
RPostgres 1.4.5
RSQLite 2.3.1
RUnit 0.4.32
Rcpp 1.0.10
RcppAnnoy 0.0.20
RcppArmadillo 0.12.2.0.0
RcppEigen 0.3.3.9.3
RcppHNSW 0.4.1
RcppProgress 0.4.2
RcppProgressArmadillo 0.2
RcppProgressETA 0.1
RcppProgressExample 0.2
RcppTOML 0.2.2
Rhdf5lib 1.22.0
Rtsne 0.16
S4Arrays 1.0.1
S4Vectors 0.38.1
ScaledMatrix 1.8.1
Seurat 4.3.0
SeuratObject 4.1.3
SingleCellExperiment 1.22.0
SummarizedExperiment 1.30.1
TrajectoryUtils 1.8.0
VGAM 1.1-8
XML 3.99-0.14
XVector 0.40.0
abind 1.4-5
ade4 1.7-22
annotate 1.78.0
ape 5.7-1
arrow 12.0.0
askpass 1.1
assertthat 0.2.1
backports 1.4.1
base64enc 0.1-3
base 4.3.0
beachmat 2.16.0
beachtest 1.0.0
beeswarm 0.4.0
benchmarkme 1.0.8
benchmarkmeData 1.0.4
biocViews 1.68.0
bit64 4.0.5
bit 4.0.5
bitops 1.0-7
blob 1.2.4
bluster 1.10.0
boot 1.3-28.1
brew 1.0-8
brio 1.1.3
broom 1.0.4
bslib 0.4.2
caTools 1.18.2
cachem 1.0.8
callr 3.7.3
cellranger 1.1.0
circlize 0.4.15
class 7.3-21
cli 3.6.1
clipr 0.8.0
clue 0.3-64
cluster 2.1.4
clusterExperiment 2.20.0
codetools 0.2-19
colorspace 2.1-0
combinat 0.0-8
commonmark 1.9.0
compiler 4.3.0
conflicted 1.2.0
cowplot 1.1.1
cpp11 0.4.3
crayon 1.5.2
credentials 1.3.2
crosstalk 1.2.0
curl 5.0.0
data.table 1.14.8
datasets 4.3.0
dbplyr 2.3.2
deldir 1.0-6
desc 1.4.2
devtools 2.4.5
diffobj 0.3.5
digest 0.6.31
doParallel 1.0.17
docopt 0.7.1
downlit 0.4.2
dplyr 1.1.2
dqrng 0.3.0
dtplyr 1.3.1
duckdb 0.7.1-1
edgeR 3.42.2
ellipsis 0.3.2
evaluate 0.21
fansi 1.0.4
farver 2.1.1
fastICA 1.2-3
fastmap 1.1.1
fitdistrplus 1.1-11
fontawesome 0.5.1
forcats 1.0.0
foreach 1.5.2
foreign 0.8-84
formatR 1.14
fs 1.6.2
fst 0.9.8
fstcore 0.9.14
futile.logger 1.4.3
futile.options 1.0.1
future.apply 1.10.0
future 1.32.0
gam 1.22-2
gargle 1.4.0
genefilter 1.82.1
generics 0.1.3
gert 1.9.2
ggbeeswarm 0.7.2
ggforce 0.4.1
ggplot2 3.4.2
ggraph 2.1.0
ggrepel 0.9.3
ggridges 0.5.4
gh 1.4.0
gitcreds 0.1.2
globals 0.16.2
glue 1.6.2
gmp 0.7-1
goftest 1.2-3
googledrive 2.1.0
googlesheets4 1.1.0
gplots 3.1.3
grDevices 4.3.0
graph 1.78.0
graphics 4.3.0
graphlayouts 1.0.0
grid 4.3.0
gridBase 0.4-7
gridExtra 2.3
gtable 0.3.3
gtools 3.9.4
haven 2.5.2
here 1.0.1
highr 0.10
hms 1.1.3
howmany 0.3-1
htmltools 0.5.5
htmlwidgets 1.6.2
httpuv 1.6.11
httr2 0.2.3
httr 1.4.6
ica 1.0-3
ids 1.0.1
igraph 1.4.2
ini 0.3.1
irlba 2.3.5.1
isoband 0.2.7
iterators 1.0.14
jquerylib 0.1.4
jsonlite 1.8.4
kernlab 0.9-32
knitr 1.42
labeling 0.4.2
lambda.r 1.2.4
later 1.3.1
lattice 0.21-8
lazyeval 0.2.2
leiden 0.4.3
leidenbase 0.1.18
lifecycle 1.0.3
limma 3.56.1
listenv 0.9.0
littler 0.3.18
lmtest 0.9-40
locfdr 1.1-8
locfit 1.5-9.7
lubridate 1.9.2
magrittr 2.0.3
matrixStats 0.63.0
mbkmeans 1.16.0
memoise 2.0.1
metapod 1.8.0
methods 4.3.0
mgcv 1.8-42
miloR 1.8.1
mime 0.12
miniUI 0.1.1.1
modelr 0.1.11
monocle 2.28.0
morebeach 1.0.0
morebeachtests 1.0.0
munsell 0.5.0
nlme 3.1-162
nnet 7.3-18
nycflights13 1.0.2
openssl 2.0.6
org.testing.db 0.1
parallel 4.3.0
parallelly 1.35.0
patchwork 1.1.2
pbapply 1.7-0
pheatmap 1.0.12
phylobase 0.8.10
pillar 1.9.0
pixmap 0.4-12
pkgbuild 1.4.0
pkgconfig 2.0.3
pkgdown 2.0.7
pkgload 1.3.2
plogr 0.2.0
plotly 4.10.1
plyr 1.8.8
png 0.1-8
polyclip 1.10-4
pracma 2.4.2
praise 1.0.0
prettyunits 1.1.1
princurve 2.1.6
processx 3.8.1
profvis 0.3.8
progress 1.2.2
progressr 0.13.0
promises 1.2.0.1
proxy 0.4-27
ps 1.7.5
purrr 1.0.1
qlcMatrix 0.9.7
ragg 1.2.5
rappdirs 0.3.3
rcmdcheck 1.4.0
readr 2.1.4
readxl 1.4.2
registry 0.5-1
rematch2 2.1.2
rematch 1.0.1
remotes 2.4.2
reprex 2.0.2
reshape2 1.4.4
reticulate 1.28
rhdf5 2.44.0
rhdf5filters 1.12.1
rjson 0.2.21
rlang 1.1.1
rmarkdown 2.21
rncl 0.8.7
rngtools 1.5.2
roxygen2 7.2.3
rpart 4.1.19
rprojroot 2.0.3
rstudioapi 0.14
rsvd 1.0.5
rversions 2.1.2
rvest 1.0.3
sass 0.4.6
scales 1.2.1
scattermore 1.0
scran 1.28.1
sctransform 0.3.5
scuttle 1.10.1
selectr 0.4-2
sessioninfo 1.2.2
shape 1.4.6
shiny 1.7.4
sitmo 2.0.2
slam 0.1-50
slingshot 2.8.0
snow 0.4-4
softImpute 1.4-1
sourcetools 0.1.7-1
sp 1.6-0
sparseMatrixStats 1.12.0
sparsesvd 0.2-2
spatial 7.3-16
spatstat.data 3.0-1
spatstat.explore 3.1-0
spatstat.geom 3.2-1
spatstat.random 3.1-5
spatstat.sparse 3.0-1
spatstat.utils 3.0-3
splines 4.3.0
statmod 1.5.0
stats4 4.3.0
stats 4.3.0
stringi 1.7.12
stringr 1.5.0
survival 3.5-5
sys 3.4.1
systemfonts 1.0.4
tcltk 4.3.0
tensor 1.5
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.8
textshaping 0.3.6
tibble 3.2.1
tidygraph 1.2.3
tidyr 1.3.0
tidyselect 1.2.0
tidyverse 2.0.0
timechange 0.2.0
tinytex 0.45
tools 4.3.0
translations 4.3.0
tweenr 2.0.2
tzdb 0.3.0
urlchecker 1.0.1
usethis 2.1.6
utf8 1.2.3
utils 4.3.0
uuid 1.1-0
uwot 0.1.14
vctrs 0.6.2
vipor 0.4.5
viridis 0.6.3
viridisLite 0.4.2
vroom 1.6.3
waldo 0.5.1
whisker 0.4.1
withr 2.5.0
xfun 0.39
xml2 1.3.4
xopen 1.0.0
xtable 1.8-4
yaml 2.3.7
zinbwave 1.22.0
zip 2.3.0
zlibbioc 1.46.0
zoo 1.8-12

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golang.org/x/sys v0.0.0-20220715151400-c0bba94af5f8
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lightning-utilities 0.8.0
lit 16.0.3
llvmlite 0.40.0
markdown-it-py 2.2.0
matplotlib-inline 0.1.6
matplotlib 3.7.1
mdurl 0.1.2
mistune 2.0.5
ml-collections 0.1.1
ml-dtypes 0.1.0
mpmath 1.3.0
msgpack 1.0.5
mudata 0.2.2
multidict 6.0.4
multipledispatch 0.6.0
muon 0.1.3
mvtcr 0.1.1
natsort 8.3.1
nbclassic 1.0.0
nbclient 0.7.4
nbconvert 7.4.0
nbformat 5.8.0
nest-asyncio 1.5.6
networkx 3.1
newick 1.0.0
notebook 6.5.4
notebook_shim 0.2.3
numba 0.57.0
numpy 1.24.3
numpyro 0.11.0
nvidia-cublas-cu11 11.10.3.66
nvidia-cuda-cupti-cu11 11.7.101
nvidia-cuda-nvrtc-cu11 11.7.99
nvidia-cuda-runtime-cu11 11.7.99
nvidia-cudnn-cu11 8.5.0.96
nvidia-cufft-cu11 10.9.0.58
nvidia-curand-cu11 10.2.10.91
nvidia-cusolver-cu11 11.4.0.1
nvidia-cusparse-cu11 11.7.4.91
nvidia-nccl-cu11 2.14.3
nvidia-nvtx-cu11 11.7.91
omnipath 1.0.6
openpyxl 3.1.2
opt-einsum 3.3.0
optax 0.1.5
orbax-checkpoint 0.2.3
packaging 23.1
pandas 1.5.3
pandocfilters 1.5.0
parasail 1.3.4
parso 0.8.3
patsy 0.5.3
pexpect 4.8.0
pickleshare 0.7.5
pip 22.0.2
platformdirs 3.5.1
prometheus-client 0.16.0
prompt-toolkit 3.0.38
protobuf 4.23.0
psutil 5.9.5
ptyprocess 0.7.0
pure-eval 0.2.2
pycparser 2.21
pydantic 1.10.7
pynndescent 0.5.10
pyparsing 3.0.9
pyro-api 0.1.2
pyro-ppl 1.8.4
pyrsistent 0.19.3
python-Levenshtein 0.21.0
python-dateutil 2.8.2
python-igraph 0.10.4
python-json-logger 2.0.7
pytoml 0.1.21
pytorch-lightning 1.9.5
pytz-deprecation-shim 0.1.0.post0
pytz 2023.3
pyzmq 25.0.2
rapidfuzz 3.0.0
requests 2.30.0
rfc3339-validator 0.1.4
rfc3986-validator 0.1.1
rich 13.3.5
rpy2 3.5.5
scArches 0.5.8
scHPL 1.0.2
scanpy 1.9.3
scikit-learn 1.2.2
scipy 1.10.1
scirpy 0.12.2
scvi-tools 0.20.3
seaborn 0.12.2
session-info 1.0.0
setuptools-scm 7.1.0
setuptools 44.1.1
setuptools 59.6.0
six 1.16.0
sniffio 1.3.0
soupsieve 2.4.1
squarify 0.4.3
stack-data 0.6.2
statsmodels 0.14.0
stdlib-list 0.8.0
sympy 1.12
tensorstore 0.1.36
terminado 0.17.1
texttable 1.6.7
threadpoolctl 3.1.0
tinycss2 1.2.1
tomli 2.0.1
toolz 0.12.0
torch 2.0.1
torchmetrics 0.11.4
tornado 6.3.1
tqdm 4.65.0
traitlets 5.9.0
triton 2.0.0
typing_extensions 4.5.0
tzdata 2023.3
tzlocal 4.3
umap-learn 0.5.3
uri-template 1.2.0
urllib3 2.0.2
wcwidth 0.2.6
webcolors 1.13
webencodings 0.5.1
websocket-client 1.5.1
wheel 0.37.1
wrapt 1.15.0
wsgiref 0.1.2
y-py 0.5.9
yamlordereddictloader 0.4.0
yarl 1.9.2
ypy-websocket 0.8.2

ecosyste.ms

Data

Tools

Indexes

Applications

Experiments

Docker

shl198/sc_ppl : 202306

Dependencies