Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : pypi : anndata

Explore the latest package usage data for anndata in the pypi ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 82
Total downloads: 36,483

More details on packages.ecosyste.ms - JSON

singlecellopenproblems/openproblems-python-pytorch latest

  • version: 0.8.
Latest release: almost 2 years ago - 6,236 downloads - 1,439 dependencies
singlecellopenproblems/openproblems-python-bedtools latest

  • version: 0.8.
Latest release: almost 2 years ago - 4,448 downloads - 1,440 dependencies
ocdr/ds-apps test2

  • version: 0.8.0, 0.10.0
Latest release: 12 months ago - 3,555 downloads - 3,778 dependencies
qdidiscoveryservices/cellranger7.0.1_py3_r4 v1.2.2

  • version: 0.8.0
Latest release: about 1 year ago - 2,811 downloads - 1,464 dependencies
gesiscss/binder-imperial-2dgenomics-2dfacility-2dscanpy-2dnotebook-2dimage-6f44d6 e9423c0c1f8a91c5a06d2023b6abfeee4fbe4c0b

  • version: 0.7.6
Latest release: over 3 years ago - 351 downloads - 2,676 dependencies
testalabgh/downstream signac-1.4.0

  • version: 0.7.6
Latest release: over 1 year ago - 485 downloads - 3,517 dependencies
koki/kb_python latest

  • version: 0.6.22.post1
Latest release: over 3 years ago - 88 downloads - 207 dependencies
gesiscss/binder-yoseflab-2dscvi-03fa30 b20e34f02a87d16790dbacc95b2ae1714c08615c

  • version: 0.7.1
Latest release: over 4 years ago - 57 downloads - 1,635 dependencies
alexanrna/souporcell v2.4.0.final_v2

  • version: 0.7.6
Latest release: over 2 years ago - 44 downloads - 596 dependencies
bicore/cellexport_on_hpc 2

  • version: 0.7.6
Latest release: almost 2 years ago - 59 downloads - 464 dependencies
fgeraci18/rapids_tensorflow v0.2

  • version: 0.8.0
Latest release: almost 2 years ago - 28 downloads - 2,343 dependencies
ghhenry/curio-seeker-pipeline latest

  • version: 0.8.0
Latest release: almost 2 years ago - 27 downloads - 926 dependencies
sheddn/bioinformatics-tools latest

  • version: 0.8.0
Latest release: almost 2 years ago - 41 downloads - 2,518 dependencies
etretiakov/workbench-session-complete jammy-2023.10.24-custom-12.5

  • version: 0.8.0, 0.9.2
Latest release: about 1 year ago - 58 downloads - 6,961 dependencies
kaizhang/scatac-bench 0.2.1

  • version: 0.9.2
Latest release: over 1 year ago - 55 downloads - 588 dependencies
leepc12/test-jupyterhub v0.2.0

test-jupyterhub

  • version: 0.8.0
Latest release: over 1 year ago - 30 downloads - 1,857 dependencies
kboltonlab/scbert 0.2

  • version: 0.8.0
Latest release: almost 2 years ago - 87 downloads - 301 dependencies
shl198/sc_ppl 202306

  • version: 0.9.1
Latest release: over 1 year ago - 52 downloads - 2,005 dependencies
johnyaku/souporcell test

Extension to the original souporcell pipeline:

  • version: 0.7.6
Latest release: about 1 year ago - 61 downloads - 780 dependencies
agobbini/immcantation_ingm 4.3.1

  • version: 0.8.0
Latest release: almost 2 years ago - 14 downloads - 84 dependencies
viascientific/cellxgene_vip_app 1.1.1

  • version: 0.7.4, 0.9.1
Latest release: over 1 year ago - 46 downloads - 2,287 dependencies
curiobioinformatics/curio-seeker-pipeline 363d9feeef37b9b99915dea19822d0f75d7c8898

  • version: 0.8.0, 0.9.2
Latest release: 11 months ago - 8,848 downloads - 1,523 dependencies
mparikhbroad/soupx 1.0.0

  • version: 0.9.1
Latest release: over 1 year ago - 86 downloads - 1,154 dependencies
paularstrpo/cnmf v01.27.2023

  • version: 0.8.0
Latest release: almost 2 years ago - 36 downloads - 62 dependencies
erikfas/spatialtranscriptomics latest

Temporary Dockerfile for nf-core/spatialtranscriptomics

  • version: 0.9.1
Latest release: almost 2 years ago - 647 downloads - 310 dependencies
zhangchao162/cuda-pytorch 11.3

cuda11.3 + torch1.10.0 + torch_geometric

  • version: 0.8.0
Latest release: almost 2 years ago - 15 downloads - 294 dependencies
jmlehrer/sims-benchmark aparnafetalintersection

  • version: 0.9.1
Latest release: about 1 year ago - 1,538 downloads - 565 dependencies
chriswyatt/bioseqio_gffread latest

  • version: 0.8.0
Latest release: over 1 year ago - 34 downloads - 240 dependencies
koki/velocyto 20221005

  • version: 0.8.0
Latest release: about 2 years ago - 22 downloads - 73 dependencies
mhooper718/multivi v1

  • version: 0.8.0
Latest release: almost 2 years ago - 10 downloads - 1,220 dependencies
goushixue/stereopy latest

  • version: 0.7.5
Latest release: almost 2 years ago - 11 downloads - 319 dependencies
stormgod/deepmaps-cpu latest

  • version: 0.7.6
Latest release: over 1 year ago - 31 downloads - 1,710 dependencies
gcfntnu/cellbender 0.3.0

  • version: 0.9.1
Latest release: over 1 year ago - 70 downloads - 1,917 dependencies
dockeryjx199908/test_auth_code v1

  • version: 0.8.0
Latest release: almost 2 years ago - 7 downloads - 432 dependencies
mhooper718/snap2scvi v1

  • version: 0.9.2
Latest release: over 1 year ago - 48 downloads - 1,164 dependencies
privacyiskey/11.3lts-scanpy latest

  • version: 0.8.0
Latest release: over 1 year ago - 27 downloads - 170 dependencies
kdgosik/main-gitpod latest

  • version: 0.8.0
Latest release: over 1 year ago - 49 downloads - 1,820 dependencies
brianyee/celligrate 55ba642

  • version: 0.8.0
Latest release: almost 2 years ago - 9 downloads - 2,522 dependencies
aleksa1902/spagcn latest

  • version: 0.9.1
Latest release: over 1 year ago - 8 downloads - 65 dependencies
crukmi/liana_tensor 0.1.9

  • version: 0.8.0
Latest release: almost 2 years ago - 9 downloads - 467 dependencies
ireceptor/gateway-utilities tapis3

  • version: 0.8.0
Latest release: almost 2 years ago - 8 downloads - 44 dependencies
lishuangshuang3/dnbc4dev latest

  • version: 0.9.1
Latest release: over 1 year ago - 73 downloads - 1,043 dependencies
takh/melanoma_visium_jax latest

  • version: 0.8.0
Latest release: almost 2 years ago - 8 downloads - 83 dependencies
depot001/scipy-notebook-scanpy latest

This is scipy-notebook with scanpy installed on top of it.

  • version: 0.8.0
Latest release: almost 2 years ago - 35 downloads - 1,335 dependencies
bicore/scrattch_mapping 0.51

  • version: 0.8.0
Latest release: about 1 year ago - 573 downloads - 832 dependencies
cavenel/spatialtranscriptomics latest

  • version: 0.9.0
Latest release: over 1 year ago - 48 downloads - 193 dependencies
njjai/scbasset_ai 0.1

  • version: 0.8.0
Latest release: over 1 year ago - 11 downloads - 1,258 dependencies
pvstodghill/pipeline-genomes 2023-11-21

  • version: 0.8.0
Latest release: about 1 year ago - 23 downloads - 312 dependencies
kingstonduo/cellxgene v1.0.0

  • version: 0.7.4
Latest release: almost 2 years ago - 11 downloads - 481 dependencies
estorrs/multiplex-imaging-pipeline 0.2.0

  • version: 0.9.1
Latest release: 11 months ago - 1,716 downloads - 1,208 dependencies
cerebrassu/downstream cerebra-0.1.3

  • version: 0.9.1
Latest release: over 1 year ago - 608 downloads - 2,727 dependencies
johnjun094/scgsea 0.3.11

DockerFile for benchmarking ssGSEA for single-cell RNA-seq

  • version: 0.8.0
Latest release: about 1 year ago - 388 downloads - 924 dependencies
dyeramosu/scenic_plus_terra 1.0.2

  • version: 0.8.0
Latest release: about 1 year ago - 295 downloads - 579 dependencies
ocdr/dcv 1.0.7

  • version: 0.9.1
Latest release: about 1 year ago - 358 downloads - 3,979 dependencies
jmlehrer/scanvi-benchmark intersection

  • version: 0.9.1
Latest release: about 1 year ago - 224 downloads - 508 dependencies
kevinmeli/scte_kmeli_dockerimg 2.1

  • version: 0.9.1
Latest release: over 1 year ago - 142 downloads - 448 dependencies
mvillanu/cnmf latest

  • version: 0.8.0
Latest release: over 1 year ago - 108 downloads - 602 dependencies
seamustard52/introbioinfo-exercise06 latest

  • version: 0.8.0
Latest release: over 1 year ago - 94 downloads - 380 dependencies
jmlehrer/scnym-benchmark timetest2

  • version: 0.9.1
Latest release: over 1 year ago - 93 downloads - 376 dependencies
btrspg/tape latest

  • version: 0.9.2
Latest release: over 1 year ago - 89 downloads - 2,044 dependencies
jmlehrer/all-benchmarks latest

  • version: 0.9.1
Latest release: over 1 year ago - 85 downloads - 568 dependencies
njjai/scrattch_mapping 0.52.2

  • version: 0.8.0
Latest release: 10 months ago - 436 downloads - 867 dependencies
maayanlab/d2h2 1.3.02

  • version: 0.8.0
Latest release: 10 months ago - 247 downloads - 251 dependencies
yiruis/singlecellfusion v2

  • version: 0.6.22.post1
Latest release: over 1 year ago - 70 downloads - 959 dependencies
atex91/scanpy-project latest

  • version: 0.8.0
Latest release: almost 2 years ago - 64 downloads - 42 dependencies
jafoltz/sc_python 8

  • version: 0.8.0
Latest release: over 1 year ago - 63 downloads - 438 dependencies
biohpc/scrna2023 2.0.1

  • version: 0.8.0
Latest release: over 1 year ago - 92 downloads - 1,233 dependencies
gesiscss/binder-r2d-g5b5b759-jaspreetishar-2dboremi-6968a5 bfbd16adcf46435b460c2b790c5e2e22c3f5f023

  • version: 0.8.0
Latest release: 12 months ago - 82 downloads - 1,247 dependencies
etycksen/sc_deluxe 0.2

  • version: 0.9.2
Latest release: about 1 year ago - 249 downloads - 757 dependencies
mmingay2/scanpy 0.2

  • version: 0.8.0
Latest release: over 1 year ago - 55 downloads - 55 dependencies
nikhil166/cellxgene_vip_docker v2.4

  • version: 0.8.0
Latest release: about 1 year ago - 86 downloads - 2,101 dependencies
haniffalab/webatlas-pipeline 0.5.1

  • version: 0.8.0
Latest release: 11 months ago - 92 downloads - 224 dependencies
depot001/scipy-notebook-cellrank 26062023

  • version: 0.9.1
Latest release: over 1 year ago - 45 downloads - 1,320 dependencies
evafastpf/commot 0.1

  • version: 0.7.6
Latest release: over 1 year ago - 48 downloads - 1,877 dependencies
berombau/combio-project-2022-2023 latest

  • version: 0.8.0
Latest release: over 1 year ago - 43 downloads - 1,676 dependencies
mknudson/share_task_cell_annotation mei-cell-annotation

  • version: 0.9.2
Latest release: about 1 year ago - 42 downloads - 316 dependencies
bioinfotongli/spatial_annot latest

  • version: 0.9.1
Latest release: over 1 year ago - 41 downloads - 124 dependencies
alexthiery/scenicplus 0.1

  • version: 0.9.2
Latest release: over 1 year ago - 59 downloads - 1,301 dependencies
fluentin55/singlecell_docker 1.2

  • version: 0.8.0
Latest release: over 1 year ago - 40 downloads - 452 dependencies
jonasmrr/scrnaseq-pipeline latest

  • version: 0.9.1
Latest release: over 1 year ago - 35 downloads - 356 dependencies
bioxfu/xseurat2 latest

  • version: 0.7.8
Latest release: almost 2 years ago - 36 downloads - 982 dependencies
robertplayer/scidap-genelists v3.0.0

  • version: 0.9.1
Latest release: about 1 year ago - 74 downloads - 609 dependencies