Ecosyste.ms: Docker

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koki/sctensor-experiments : 20220208

Latest release: almost 3 years ago - 256 downloads - 2,071 dependencies

Dependencies

@PKGNAME@ @PKGVERSION@
@PKGNAME@ @VERSION@
AnVIL 1.6.2
AnnotationDbi 1.56.2
AnnotationForge 1.36.0
AnnotationHub 3.2.1
BH 1.78.0-0
Biobase 2.54.0
BiocFileCache 2.2.1
BiocGenerics 0.40.0
BiocIO 1.4.0
BiocManager 1.30.16
BiocParallel 1.28.3
BiocStyle 2.22.0
BiocVersion 3.14.0
Biostrings 2.62.0
Category 2.60.0
DBI 1.1.2
DESeq2 1.34.0
DO.db 2.9
DOSE 3.20.1
DT 0.20
DelayedArray 0.20.0
FNN 1.1.3
GO.db 3.14.0
GOSemSim 2.20.0
GOstats 2.60.0
GSEABase 1.56.0
GenomeInfoDb 1.30.1
GenomeInfoDbData 1.2.7
GenomicAlignments 1.30.0
GenomicFeatures 1.46.4
GenomicRanges 1.46.1
Homo.sapiens 1.3.1
IRanges 2.28.0
KEGGREST 1.34.0
KernSmooth 2.23-20
LRBaseDbi 2.4.0
MASS 7.3-55
Matrix 1.4-0
MatrixGenerics 1.6.0
Mus.musculus 1.3.1
MeSHDbi 1.30.0
OrganismDbi 1.36.0
R6 2.5.1
RANN 2.6.1
RBGL 1.70.0
RColorBrewer 1.1-2
RCurl 1.98-1.5
ROCR 1.0-11
RSQLite 2.2.9
RSpectra 0.16-0
Rcpp 1.0.8
RcppAnnoy 0.0.19
RcppArmadillo 0.10.8.1.0
RcppEigen 0.3.3.9.1
RcppProgress 0.4.2
RcppProgressArmadillo 0.2
RcppProgressETA 0.1
RcppProgressExample 0.2
RcppTOML 0.1.7
ReactomePA 1.38.0
Rgraphviz 2.38.0
Rhtslib 1.26.0
Rsamtools 2.10.0
Rtsne 0.15
S4Vectors 0.32.3
Seurat 4.1.0
SeuratObject 4.0.4
SingleCellExperiment 1.16.0
SummarizedExperiment 1.24.0
TSP 1.1-11
TxDb.Hsapiens.UCSC.hg19.knownGene 3.2.2
TxDb.Mmusculus.UCSC.mm10.knownGene 3.10.0
V8 4.1.0
XML 3.99-0.8
XVector 0.34.0
abind 1.4-5
annotate 1.72.0
ape 5.6-1
aplot 0.1.2
askpass 1.1
assertthat 0.2.1
babelgene 21.4
backports 1.4.1
base64enc 0.1-3
base 4.1.2
biomaRt 2.50.3
bit64 4.0.5
bit 4.0.4
bitops 1.0-7
blob 1.2.2
bookdown 0.24
boot 1.3-28
brew 1.0-7
brio 1.1.3
bslib 0.3.1
caTools 1.18.2
cachem 1.0.6
callr 3.7.0
ccTensor 1.0.2
checkmate 2.0.0
class 7.3-20
classInt 0.4-3
cli 3.1.1
clipr 0.7.1
cluster 2.1.2
codetools 0.2-18
colorspace 2.0-2
commonmark 1.7
compiler 4.1.2
concaveman 1.1.0
cowplot 1.1.1
cpp11 0.4.2
crayon 1.4.2
credentials 1.3.2
crosstalk 1.2.0
curl 4.3.2
data.table 1.14.2
datasets 4.1.2
dbplyr 2.1.1
dbscan 1.1-10
deldir 1.0-6
dendextend 1.15.2
desc 1.4.0
devtools 2.4.3
diffobj 0.3.5
digest 0.6.29
docopt 0.7.1
dotCall64 1.0-1
dplyr 1.0.7
dqrng 0.3.0
e1071 1.7-9
egg 0.4.5
ellipsis 0.3.2
enrichplot 1.14.1
entropy 1.3.1
evaluate 0.14
fansi 1.0.2
farver 2.1.0
fastmap 1.1.0
fastmatch 1.1-3
fdrtool 1.2.17
fgsea 1.20.0
fields 13.3
filelock 1.0.2
fitdistrplus 1.1-6
fontawesome 0.2.2
foreach 1.5.2
foreign 0.8-82
formatR 1.11
fs 1.5.2
futile.logger 1.4.3
futile.options 1.0.1
future.apply 1.8.1
future 1.23.0
gclus 1.3.2
genefilter 1.76.0
geneplotter 1.72.0
generics 0.1.2
gert 1.5.0
ggforce 0.3.3
ggfun 0.0.5
ggplot2 3.3.5
ggplotify 0.1.0
ggraph 2.0.5
ggrepel 0.9.1
ggridges 0.5.3
ggtree 3.2.1
gh 1.3.0
gitcreds 0.1.1
globals 0.14.0
glue 1.6.1
goftest 1.2-3
gplots 3.1.1
grDevices 4.1.2
graph 1.72.0
graphics 4.1.2
graphite 1.40.0
graphlayouts 0.8.0
grid 4.1.2
gridExtra 2.3
gridGraphics 0.5-1
gtable 0.3.0
gtools 3.9.2
heatmaply 1.3.0
here 1.0.1
hexbin 1.28.2
highr 0.9
hms 1.1.1
htmltools 0.5.2
htmlwidgets 1.5.4
httpuv 1.6.5
httr 1.4.2
ica 1.0-2
igraph 1.2.11
ini 0.3.1
interactiveDisplayBase 1.32.0
irlba 2.3.5
isoband 0.2.5
iterators 1.0.14
jquerylib 0.1.4
jsonlite 1.7.3
knitr 1.37
labeling 0.4.2
lambda.r 1.2.4
later 1.3.0
lattice 0.20-45
lazyeval 0.2.2
leiden 0.3.9
lifecycle 1.0.1
listenv 0.8.0
littler 0.3.15
lmtest 0.9-39
locfit 1.5-9.4
magrittr 2.0.2
maps 3.4.0
markdown 1.1
matrixStats 0.61.0
mclust 5.4.9
memoise 2.0.1
meshr 2.0.2
methods 4.1.2
mgcv 1.8-38
mime 0.12
miniUI 0.1.1.1
misc3d 0.9-1
msigdbr 7.4.1
munsell 0.5.0
nlme 3.1-155
nnTensor 1.1.5
nnet 7.3-17
openssl 1.4.6
org.Hs.eg.db 3.14.0
org.Mm.eg.db 3.14.0
org.testing.db 0.1
outliers 0.14
parallel 4.1.2
parallelly 1.30.0
patchwork 1.1.1
pbapply 1.5-0
pillar 1.7.0
pkgbuild 1.3.1
pkgconfig 2.0.3
pkgload 1.2.4
plogr 0.2.0
plot3D 1.4
plotly 4.10.0
plotrix 3.8-2
plyr 1.8.6
png 0.1-7
polyclip 1.10-0
praise 1.0.0
prettyunits 1.1.1
processx 3.5.2
progress 1.2.2
promises 1.2.0.1
proxy 0.4-26
ps 1.6.0
purrr 0.3.4
qap 0.1-1
qvalue 2.26.0
rTensor 1.4.8
rapiclient 0.1.3
rappdirs 0.3.3
rcmdcheck 1.4.0
reactome.db 1.77.0
registry 0.5-1
rematch2 2.1.2
remotes 2.4.2
reshape2 1.4.4
restfulr 0.0.13
reticulate 1.24
rjson 0.2.21
rlang 1.0.1
rmarkdown 2.11
roxygen2 7.1.2
rpart 4.1.16
rprojroot 2.0.2
rstudioapi 0.13
rtracklayer 1.54.0
rversions 2.1.1
s2 1.0.7
sass 0.4.0
scTGIF 1.8.0
scTensor 2.4.1
scales 1.1.1
scattermore 0.7
scatterpie 0.1.7
schex 1.8.0
sctransform 0.3.3
seqnames.db @VERSION@
seriation 1.3.1
sessioninfo 1.2.2
sf 1.0-6
shadowtext 0.1.1
shiny 1.7.1
sitmo 2.0.2
snow 0.4-4
sourcetools 0.1.7
spam 2.8-0
spatial 7.3-15
spatstat.core 2.3-2
spatstat.data 2.1-2
spatstat.geom 2.3-1
spatstat.sparse 2.1-0
spatstat.utils 2.3-0
splines 4.1.2
statmod 1.4.36
stats4 4.1.2
stats 4.1.2
stringi 1.7.6
stringr 1.4.0
survival 3.2-13
sys 3.4
tagcloud 0.6
tcltk 4.1.2
tensor 1.5
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.2
tibble 3.1.6
tidygraph 1.2.0
tidyr 1.2.0
tidyselect 1.1.1
tidytree 0.3.7
tinytex 0.36
tools 4.1.2
translations 4.1.2
treeio 1.18.1
tweenr 1.0.2
units 0.8-0
usethis 2.1.5
utf8 1.2.2
utils 4.1.2
uwot 0.1.11
vctrs 0.3.8
viridis 0.6.2
viridisLite 0.4.0
visNetwork 2.1.0
waldo 0.3.1
webshot 0.5.2
whisker 0.4
withr 2.4.3
wk 0.6.0
xfun 0.29
xml2 1.3.3
xopen 1.0.0
xtable 1.8-4
yaml 2.2.2
yulab.utils 0.0.4
zip 2.2.0
zlibbioc 1.40.0
zoo 1.8-9

bash 5.0.17