Ecosyste.ms: Docker

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Package Usage : deb : ubuntu/tabix

Explore the latest package usage data for ubuntu/tabix in the deb ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 350
Total downloads: 34,323,724

More details on packages.ecosyste.ms - JSON

broadinstitute/gatk 4.5.0.0

Official release repository for GATK versions 4.x

  • version: 1.13 ds-2build1, 1.7-2
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: 9 months ago - 31,988,536 downloads - 912 dependencies
bioconductor/bioconductor_docker devel-R-devel

Bioconductor Docker Images

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: 10 months ago - 1,124,807 downloads - 1,397 dependencies
broadinstitute/terra-jupyter-aou 8bf6b13

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 92,816 downloads - 4,112 dependencies
broadinstitute/gatk-nightly 2024-01-06-4.5.0.0-3-gb68fadc5f-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

  • version: 1.7-2, 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-18.04
Latest release: 8 months ago - 86,066 downloads - 912 dependencies
vanallenlab/sv-pipeline-base gnomad_rf_abd6c1

  • version: 1.7-2
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-18.04
Latest release: over 1 year ago - 88,219 downloads - 1,101 dependencies
broadinstitute/gatk-dev NVSCOREVARIANTS-PREVIEW-SNAPSHOT

GATK Development

  • version: 1.7-2
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-18.04
Latest release: almost 2 years ago - 6,653 downloads - 752 dependencies
vanallenlab/sv-base-mini d975c18

  • version: 1.7-2
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-18.04
Latest release: about 1 year ago - 6,267 downloads - 134 dependencies
biocontainers/imputeme vv1.0.7_cv1

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 3 years ago - 3,931 downloads - 1,734 dependencies
biocontainers/isee-galaxy v3.13_cv1.0.0

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 3 years ago - 3,660 downloads - 1,218 dependencies
broadinstitute/dig-loam ensembl_vep_r110.1_docker_image

Images for programs and libraries used my LoamStream for processing genetic data.

  • version: 1.7-2
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-18.04
Latest release: about 1 year ago - 982 downloads - 353 dependencies
intelliseqngs/task_vcf-beagle-postproc 1.1.1

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 87,587 downloads - 333 dependencies
intelliseqngs/task_vcf-anno-dbsnp 1.1.1-chrY-and-the-rest

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 60,654 downloads - 333 dependencies
intelliseqngs/task_vcf-anno-dbnsfp 1.3.0-chrY-and-the-rest

  • version: 1.10.2-3, 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 60,110 downloads - 418 dependencies
intelliseqngs/task_vcf-anno-scores 1.2.1-chrY-and-the-rest

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 57,667 downloads - 633 dependencies
intelliseqngs/ubuntu-toolbox-20.04 2.0.7

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 2 years ago - 51,770 downloads - 315 dependencies
intelliseqngs/vep 1.2.0-chrY-and-the-rest

  • version: 1.7-2
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-18.04
Latest release: almost 2 years ago - 47,799 downloads - 356 dependencies
intelliseqngs/task_vcf-anno-freq-exome 3.1.2-chrY-and-the-rest

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 34,010 downloads - 333 dependencies
intelliseqngs/task_vcf-anno-freq-genome 3.0.1-chrY-and-the-rest

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 32,281 downloads - 388 dependencies
intelliseqngs/task_vcf-anno-gnomadcov-exome 1.4.0-chrY-and-the-rest

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 2 years ago - 26,140 downloads - 315 dependencies
intelliseqngs/snpeff-grch38.104 1.1.3

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 17,608 downloads - 273 dependencies
intelliseqngs/task_vcf-anno-gnomadcov-genome 1.4.0-chrY-and-the-rest

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 2 years ago - 21,710 downloads - 315 dependencies
intelliseqngs/bwa-mem-hg38 3.1.0

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 3 years ago - 11,965 downloads - 233 dependencies
intelliseqngs/vcf-annotation scores-grch38_v0.2-chr19

  • version: 1.7-2
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-18.04
Latest release: over 4 years ago - 11,773 downloads - 531 dependencies
intelliseqngs/bwa-mem-grch38-no-alt 3.1.0

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 3 years ago - 11,827 downloads - 233 dependencies
intelliseqngs/ubuntu-toolbox-19.04 1.0.2

  • version: 1.9-10
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-19.04
Latest release: over 4 years ago - 10,395 downloads - 289 dependencies
intelliseqngs/gnomad-exome 1.0.0-chrY-and-the-rest

  • version: 1.9-10
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-19.04
Latest release: over 4 years ago - 9,919 downloads - 289 dependencies
intelliseqngs/task_phasing-eagle 3.0.1-chrY-and-the-rest

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 8,859 downloads - 235 dependencies
intelliseqngs/snpeff-grch38.100 1.0.0

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 4 years ago - 6,172 downloads - 245 dependencies
intelliseqngs/ubuntu-toolbox 18.04_v0.12

  • version: 1.7-2
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-18.04
Latest release: over 4 years ago - 4,938 downloads - 294 dependencies
intelliseqngs/snpeff-grch38.102 1.0.2

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 3 years ago - 4,615 downloads - 266 dependencies
intelliseqngs/task_vcf-to-json-or-tsv 1.1.0

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: 11 months ago - 5,784 downloads - 233 dependencies
intelliseqngs/gnomad-genome 1.0.0-chrY-and-the-rest

  • version: 1.9-10
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-19.04
Latest release: over 4 years ago - 4,143 downloads - 289 dependencies
intelliseqngs/task_vcf-anno-repeat 1.0.1

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 4 years ago - 4,322 downloads - 238 dependencies
intelliseqngs/task_vcf-anno-func-var 1.6.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 2,962 downloads - 333 dependencies
intelliseqngs/task_vcf-anno-ghr 1.1.4

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 3,052 downloads - 235 dependencies
intelliseqngs/task_vcf-anno-func-gene 1.3.5

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 3,027 downloads - 315 dependencies
intelliseqngs/task_vcf-acmg-pvs1 1.6.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 2,962 downloads - 333 dependencies
intelliseqngs/task_phase-imput-beagle 2.0.0-chrX

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 2 years ago - 3,376 downloads - 362 dependencies
intelliseqngs/task_vcf-acmg-bp1 1.5.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 2,843 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pm5 1.6.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 2,917 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-ps1 1.6.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 2,785 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-ps3 1.6.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 2,653 downloads - 334 dependencies
intelliseqngs/task_vcf-acmg-bp5 1.3.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 2,902 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pm1 2.3.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 2,859 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pp2 1.6.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 2,879 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-ba1 1.2.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 2,874 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pm2 1.3.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 2,876 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-bp4 2.2.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 2,873 downloads - 333 dependencies
intelliseqngs/task_vcf-filter-panel 1.1.1

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 3 years ago - 2,621 downloads - 315 dependencies
intelliseqngs/task_vcf-acmg-summary 1.3.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 2,862 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-bp7 1.4.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 2,730 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-bs2 1.2.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 2,866 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pp3 2.2.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 2,835 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-bp3 1.2.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 2,609 downloads - 333 dependencies
intelliseqngs/task_vcf-acmg-pm4 1.2.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 2,825 downloads - 333 dependencies
intelliseqngs/task_vcf-anno-cosmic 2.0.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: 11 months ago - 2,498 downloads - 346 dependencies
intelliseqngs/task_simulate-neat-hg38-chr-wise 1.0.0-chrY-and-the-rest

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 4 years ago - 2,071 downloads - 265 dependencies
intelliseqngs/snpeff-grch38.99 1.0.0

  • version: 1.7-2
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-18.04
Latest release: over 4 years ago - 2,046 downloads - 267 dependencies
intelliseqngs/task_vcf-split-multiallelic-grch38-no-alt 1.2.1

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 2,309 downloads - 333 dependencies
intelliseqngs/task_vcf-uniq 1.0.0

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 4 years ago - 2,118 downloads - 806 dependencies
intelliseqngs/task_sex-check-chr-cov 1.0.1

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 1,872 downloads - 333 dependencies
intelliseqngs/snpeff GRCh38.99_1.0.0

  • version: 1.9-10
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-19.10
Latest release: over 4 years ago - 1,741 downloads - 269 dependencies
intelliseqngs/task_vcf-anno-ge-panels 1.3.4

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 1,694 downloads - 235 dependencies
intelliseqngs/task_bam-panel-coverage 1.0.2

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 1,769 downloads - 333 dependencies
intelliseqngs/task_vcf-detect-stats 2.2.0

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 2 years ago - 1,698 downloads - 233 dependencies
intelliseqngs/task_vcf-anno-civic 1.1.2

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 1,834 downloads - 333 dependencies
intelliseqngs/bwa-mem 3.1.0

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 3 years ago - 1,508 downloads - 233 dependencies
intelliseqngs/acmg pm2_1.0.0

  • version: 1.9-10
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-19.10
Latest release: over 4 years ago - 1,490 downloads - 253 dependencies
intelliseqngs/task_vcf-acmg-pp4 1.1.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 1,451 downloads - 333 dependencies
intelliseqngs/mitolib 2.1.0

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 1,260 downloads - 562 dependencies
intelliseqngs/task_vcf-qc 1.4.0

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 1,408 downloads - 604 dependencies
intelliseqngs/mobigen-models 5.3.4

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 1,007 downloads - 361 dependencies
intelliseqngs/anno-frequencies-genome_grch38 1.0.0-chrY-and-the-rest

  • version: 1.9-10
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-19.04
Latest release: over 4 years ago - 881 downloads - 289 dependencies