qdidiscoveryservices/pipeline_docker-r_and_bioconductor : latest
Latest release: about 5 years ago - 10 downloads - 431 dependencies
JSONDependencies
- @PKGNAME@ @PKGVERSION@
- @PKGNAME@ @VERSION@
- APAlyzer 1.0.0
- AnnotationDbi 1.48.0
- BH 1.66.0-1
- Biobase 2.46.0
- BiocFileCache 1.10.2
- BiocGenerics 0.32.0
- BiocManager 1.30.10
- BiocParallel 1.20.1
- BiocVersion 3.10.1
- Biostrings 2.54.0
- ChIPseeker 1.22.1
- DBI 1.1.0
- DESeq2 1.26.0
- DESeq 1.38.0
- DEoptimR 1.0-8
- DO.db 2.9
- DOSE 3.12.0
- DT 0.11
- DelayedArray 0.12.2
- DendSer 1.0.1
- FNN 1.1.3
- Formula 1.2-3
- GO.db 3.10.0
- GOSemSim 2.12.0
- GenomeInfoDb 1.22.0
- GenomeInfoDbData 1.2.2
- GenomicAlignments 1.22.1
- GenomicFeatures 1.38.1
- GenomicRanges 1.38.0
- GlobalOptions 0.1.1
- Hmisc 4.3-0
- IRanges 2.20.2
- KernSmooth 2.23-16
- Lahman 7.0-1
- MASS 7.3-51.5
- Matrix 1.2-18
- MatrixModels 0.4-1
- PerformanceAnalytics 1.5.3
- R.cache 0.14.0
- R.devices 2.16.1
- R.methodsS3 1.7.1
- R.oo 1.23.0
- R.rsp 0.43.2
- R.utils 2.9.2
- R6 2.4.1
- RANN 2.6.1
- RColorBrewer 1.1-2
- RCurl 1.98-1.1
- ROCR 1.0-7
- RSQLite 2.2.0
- RSpectra 0.16-0
- RUnit 0.4.32
- Rcpp 1.0.3
- RcppAnnoy 0.0.14
- RcppArmadillo 0.9.800.3.0
- RcppEigen 0.3.3.7.0
- RcppParallel 4.4.4
- RcppProgress 0.4.1
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- Rdpack 0.11-1
- RdpackTester 1.0
- Rhtslib 1.18.0
- Rsamtools 2.2.1
- Rsubread 2.0.0
- Rtsne 0.15
- S4Vectors 0.24.3
- SDMTools 1.1-221.2
- SparseM 1.78
- SummarizedExperiment 1.16.1
- TFisher 0.2.0
- TH.data 1.0-10
- TSP 1.1-8
- TTR 0.23-6
- TxDb.Hsapiens.UCSC.hg19.knownGene 3.2.2
- VGAM 1.1-2
- XML 3.99-0.3
- XVector 0.26.0
- acepack 1.4.1
- annotate 1.64.0
- ape 5.3
- askpass 1.1
- assertthat 0.2.1
- backports 1.1.5
- base64enc 0.1-3
- base 3.6.2
- bibtex 0.4.2.2
- binb 0.0.5
- biomaRt 2.42.0
- bit64 0.9-7
- bit 1.1-15.1
- bitops 1.0-6
- blob 1.2.1
- boot 1.3-24
- brew 1.0-6
- broom 0.5.3
- caTools 1.18.0
- callr 3.4.0
- checkmate 1.9.4
- circlize 0.4.8
- class 7.3-15
- cli 1.1.0
- clipr 0.7.0
- clisymbols 1.2.0
- cluster 2.1.0
- clusterProfiler 3.14.3
- codetools 0.2-16
- colorspace 1.4-1
- commonmark 1.7
- compiler 3.6.2
- corrplot 0.84
- covr 3.4.0
- cowplot 1.0.0
- crayon 1.3.4
- crosstalk 1.0.0
- curl 4.3
- cyclocomp 1.1.0
- d3heatmap 0.6.1.2
- data.table 1.12.8
- datasets 3.6.2
- dbplyr 1.4.2
- dendextend 1.13.2
- desc 1.2.0
- devtools 2.2.1
- dichromat 2.0-0
- digest 0.6.23
- diptest 0.75-7
- docopt 0.6.1
- dplyr 0.8.3
- dqrng 0.2.1
- dtplyr 1.0.1
- dygraphs 1.1.1.6
- dynamicTreeCut 1.63-1
- edgeR 3.28.0
- egg 0.4.5
- ellipsis 0.3.0
- enrichplot 1.6.1
- europepmc 0.3
- evaluate 0.14
- fansi 0.4.1
- farver 2.0.3
- fastmap 1.0.1
- fastmatch 1.1-0
- fgsea 1.12.0
- fitdistrplus 1.0-14
- flexmix 2.3-15
- foghorn 1.1.4
- foreach 1.4.7
- foreign 0.8-74
- formatR 1.7
- fpc 2.2-4
- fs 1.3.1
- futile.logger 1.4.3
- futile.options 1.0.1
- future.apply 1.4.0
- future 1.16.0
- gamlss.data 5.1-4
- gamlss.dist 5.1-5
- gamlss 5.1-5
- gargle 0.4.0
- gbRd 0.4-11
- gclus 1.3.2
- gdata 2.18.0
- genefilter 1.68.0
- geneplotter 1.64.0
- generics 0.0.2
- ggforce 0.3.1
- ggplot2 3.2.1
- ggplotify 0.0.4
- ggraph 2.0.0
- ggrepel 0.8.1
- ggridges 0.5.2
- gh 1.0.1
- git2r 0.26.1
- globals 0.12.5
- glue 1.3.1
- gmailr 1.0.0
- gplots 3.0.1.2
- grDevices 3.6.2
- graphics 3.6.2
- graphlayouts 0.5.0
- grid 3.6.2
- gridExtra 2.3
- gridGraphics 0.4-1
- gtable 0.3.0
- gtools 3.8.1
- heatmaply 1.0.0
- hexbin 1.28.0
- highlight 0.5.0
- highr 0.8
- hms 0.5.3
- htmlTable 1.13.3
- htmltools 0.4.0
- htmlwidgets 1.5.1
- httpuv 1.5.2
- httr 1.4.1
- hunspell 3.0
- ica 1.0-2
- igraph 1.2.4.2
- ini 0.3.1
- irlba 2.3.3
- iterators 1.0.12
- jpeg 0.1-8.1
- jsonlite 1.6
- kernlab 0.9-29
- knitr 1.27
- labeling 0.3
- lambda.r 1.2.4
- later 1.0.0
- lattice 0.20-38
- latticeExtra 0.6-29
- lazyeval 0.2.2
- leiden 0.3.2
- lifecycle 0.1.0
- limma 3.42.0
- linkXTS 1.0
- linl 0.0.4
- lintr 2.0.0
- listenv 0.8.0
- littler 0.3.9
- lmtest 0.9-37
- locfit 1.5-9.1
- lsei 1.2-0
- lubridate 1.7.4
- magrittr 1.5
- markdown 1.1
- matrixStats 0.55.0
- mclust 5.4.5
- memoise 1.1.0
- methods 3.6.2
- mgcv 1.8-31
- microbenchmark 1.4-7
- mime 0.8
- mnormt 1.5-5
- mockery 0.4.2
- modeltools 0.2-22
- multcomp 1.4-12
- munsell 0.5.0
- mvtnorm 1.0-12
- mvtnormAPI 1.0-0
- nlme 3.1-143
- nnet 7.3-12
- npsurv 0.4-0
- numDeriv 2016.8-1.1
- nycflights13 1.0.1
- openssl 1.4.1
- openxlsx 4.1.4
- org.Ce.eg.db 3.10.0
- org.Dm.eg.db 3.10.0
- org.Hs.eg.db 3.10.0
- org.Mm.eg.db 3.10.0
- org.testing.db 0.1
- parallel 3.6.2
- parsedate 1.2.0
- pbapply 1.4-2
- pheatmap 1.0.12
- pillar 1.4.3
- pingr 2.0.0
- pinp 0.0.9
- pkgKitten 0.1.5
- pkgbuild 1.0.6
- pkgconfig 2.0.3
- pkgdown 1.4.1
- pkgload 1.0.2
- plogr 0.2.0
- plotly 4.9.1
- plotrix 3.7-7
- plyr 1.8.5
- png 0.1-7
- polyclip 1.10-0
- prabclus 2.3-2
- praise 1.0.0
- prettydoc 0.3.1
- prettyunits 1.1.0
- processx 3.4.1
- profdpm 3.3
- progress 1.2.2
- promises 1.1.0
- ps 1.3.0
- purrr 0.3.3
- pvclust 2.2-0
- qap 0.1-1
- quadprog 1.5-8
- quantmod 0.4-15
- quantreg 5.54
- qvalue 2.18.0
- rappdirs 0.3.1
- rcmdcheck 1.3.3
- readr 1.3.1
- registry 0.5-1
- rematch2 2.1.0
- rematch 1.0.1
- remotes 2.1.0
- repurrrsive 1.0.0
- reshape2 1.4.3
- reticulate 1.14
- rex 1.1.2
- rhub 1.1.1
- rlang 0.4.1
- rlanglibtest 0.0.0.9000
- rmarkdown 1.15
- rmarkdown 2.1
- robustbase 0.93-5
- roxygen2 7.0.2
- rpart 4.1-15
- rprojroot 1.3-2
- rstudioapi 0.10
- rsvd 1.0.2
- rtracklayer 1.46.0
- rvcheck 0.1.7
- rversions 2.0.1
- rvest 0.3.5
- sandwich 2.5-1
- scales 1.0.0
- scales 1.1.0
- sctransform 0.2.1
- selectr 0.4-2
- seriation 1.2-8
- sessioninfo 1.1.1
- shape 1.4.4
- shiny 1.4.0
- sitmo 2.0.1
- sn 1.5-4
- snow 0.4-3
- sourcetools 0.1.7
- spatial 7.3-11
- spelling 2.1
- splines 3.6.2
- stats4 3.6.2
- stats 3.6.2
- stringdist 0.9.5.5
- stringi 1.4.5
- stringr 1.4.0
- survival 3.1-8
- sys 3.3
- tcltk 3.6.2
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testthat 2.2.1
- tibble 2.1.3
- tidygraph 1.1.2
- tidyr 1.0.0
- tidyselect 0.2.5
- tint 0.1.2
- tinytex 0.19
- tools 3.6.2
- translations 3.6.2
- triebeard 0.3.0
- tsne 0.1-3
- tufte 0.5
- tweenr 1.0.1
- urltools 1.7.3
- usethis 1.5.1
- utf8 1.1.4
- utils 3.6.2
- uuid 0.1-2
- uwot 0.1.5
- vctrs 0.2.1
- viridis 0.5.1
- viridisLite 0.3.0
- webshot 0.5.2
- whisker 0.4
- whoami 1.3.0
- withr 2.1.2
- xfun 0.12
- xml2 1.2.2
- xmlparsedata 1.0.3
- xopen 1.0.0
- xtable 1.8-4
- xts 0.12-0
- yaml 2.2.0
- zeallot 0.1.0
- zip 2.0.4
- zlibbioc 1.32.0
- zoo 1.8-7
- pax:pax *
- tex4ht:tex4ht *
- casperjs 1.1.0-beta5
- d3-tip 0.6.6
- highlight.js 9.12.0
- html5shiv 3.7.3
- jquery-ui 1.12.1
- normalize.css 8.0.1
- Click 7.0
- Jinja2 2.10.3
- Markdown 3.1.1
- MarkupSafe 1.1.1
- PyGObject 3.34.0
- PyYAML 5.3
- argparse 1.2.1
- backports.functools-lru-cache 1.6.1
- certifi 2019.11.28
- chardet 3.0.4
- coloredlogs 10.0
- colormath 3.0.0
- cycler 0.10.0
- dbus-python 1.2.16
- decorator 4.4.1
- future 0.18.2
- humanfriendly 4.18
- idna 2.8
- kiwisolver 1.1.0
- lzstring 1.0.4
- matplotlib 2.2.4
- monotonic 1.5
- multiqc 1.8
- networkx 2.2
- numpy 1.16.6
- pip 18.1
- pycurl 7.43.0.2
- pyparsing 2.4.6
- python-apt 1.8.5
- python-dateutil 2.8.1
- pytz 2019.3
- requests 2.22.0
- setuptools 44.0.0
- simplejson 3.17.0
- six 1.14.0
- spectra 0.0.11
- subprocess32 3.5.4
- urllib3 1.25.8
- wsgiref 0.1.2